RNA–Protein interactions for RNA: ENST00000361332.8

CTNND1-202, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-202ENST00000361332 PRPF31Q8WWY3 499 aaKnown RBP9.69□□□□□ -0.86
CTNND1-202ENST00000361332 MPHOSPH6Q99547 160 aaKnown RBP9.69□□□□□ -0.86
CTNND1-202ENST00000361332 NCOA2Q15596 1464 aa9.69□□□□□ -0.86
CTNND1-202ENST00000361332 ZPR1O75312 459 aa9.69□□□□□ -0.86
CTNND1-202ENST00000361332 SURF6O75683 361 aaKnown RBP9.69□□□□□ -0.86
CTNND1-202ENST00000361332 CCDC117Q8IWD4 279 aaPredicted RBP9.69□□□□□ -0.86
CTNND1-202ENST00000361332 SIL1Q9H173 461 aa9.69□□□□□ -0.86
CTNND1-202ENST00000361332 ANKIB1Q9P2G1 1089 aa9.69□□□□□ -0.86
CTNND1-202ENST00000361332 PDZRN3Q9UPQ7 1066 aa9.69□□□□□ -0.86
CTNND1-202ENST00000361332 CASKIN1Q8WXD9 1431 aa9.69□□□□□ -0.86
CTNND1-202ENST00000361332 KIF20AO95235 890 aa9.69□□□□□ -0.86
CTNND1-202ENST00000361332 HMGB2P26583 209 aaKnown RBP9.69□□□□□ -0.86
CTNND1-202ENST00000361332 CCDC178Q5BJE1 867 aa9.69□□□□□ -0.86
CTNND1-202ENST00000361332 BEGAINQ9BUH8 593 aa9.69□□□□□ -0.86
CTNND1-202ENST00000361332 CIZ1Q9ULV3 898 aaPredicted RBP9.69□□□□□ -0.86
CTNND1-202ENST00000361332 WDR33Q9C0J8 1336 aaKnown RBP9.69□□□□□ -0.86
CTNND1-202ENST00000361332 MNAT1P51948 309 aa9.69□□□□□ -0.86
CTNND1-202ENST00000361332 PLEKHO1Q53GL0 409 aaPredicted RBP9.69□□□□□ -0.86
CTNND1-202ENST00000361332 SYNJ1O43426 1573 aa9.68□□□□□ -0.86
CTNND1-202ENST00000361332 IGHMBP2P38935 993 aaKnown RBP9.68□□□□□ -0.86
CTNND1-202ENST00000361332 CEP57L1Q8IYX8 460 aa9.68□□□□□ -0.86
CTNND1-202ENST00000361332 KIF2AO00139 706 aaPredicted RBP9.68□□□□□ -0.86
CTNND1-202ENST00000361332 EHMT1Q9H9B1 1298 aa9.68□□□□□ -0.86
CTNND1-202ENST00000361332 ADAMTS8Q9UP79 889 aa9.68□□□□□ -0.86
CTNND1-202ENST00000361332 FANCD2Q9BXW9 1451 aa9.68□□□□□ -0.86
CTNND1-202ENST00000361332 ZSCAN25Q6NSZ9 544 aa9.68□□□□□ -0.86
CTNND1-202ENST00000361332 UTP14AQ9BVJ6 771 aaKnown RBP9.68□□□□□ -0.86
CTNND1-202ENST00000361332 MICALCLQ6ZW33 695 aa9.68□□□□□ -0.86
CTNND1-202ENST00000361332 KIF18AQ8NI77 898 aa9.68□□□□□ -0.86
CTNND1-202ENST00000361332 ZNF526Q8TF50 670 aaPredicted RBP9.68□□□□□ -0.86
CTNND1-202ENST00000361332 SMG6Q86US8 1419 aaKnown RBP9.68□□□□□ -0.86
CTNND1-202ENST00000361332 KRT85P78386 507 aa9.67□□□□□ -0.86
CTNND1-202ENST00000361332 SYCE3A1L190 88 aa9.67□□□□□ -0.86
CTNND1-202ENST00000361332 MYL6BP14649 208 aa9.67□□□□□ -0.86
CTNND1-202ENST00000361332 ME1P48163 572 aa9.67□□□□□ -0.86
CTNND1-202ENST00000361332 PPP1R14CQ8TAE6 165 aa9.67□□□□□ -0.86
CTNND1-202ENST00000361332 DNAAF4Q8WXU2 420 aa9.67□□□□□ -0.86
CTNND1-202ENST00000361332 MIA2Q96PC5 1412 aa9.67□□□□□ -0.86
CTNND1-202ENST00000361332 ZBTB24O43167 697 aaPredicted RBP9.67□□□□□ -0.86
CTNND1-202ENST00000361332 DNA2P51530 1060 aa9.67□□□□□ -0.86
CTNND1-202ENST00000361332 JPH4Q96JJ6 628 aa9.67□□□□□ -0.86
CTNND1-202ENST00000361332 ABCF2Q9UG63 623 aa9.67□□□□□ -0.86
CTNND1-202ENST00000361332 NBPF8Q3BBV2 869 aa9.67□□□□□ -0.86
CTNND1-202ENST00000361332 CCDC85AQ96PX6 553 aaPredicted RBP9.67□□□□□ -0.86
CTNND1-202ENST00000361332 ARHGAP29Q52LW3 1261 aa9.67□□□□□ -0.86
CTNND1-202ENST00000361332 DZIP1Q86YF9 867 aaKnown RBP9.67□□□□□ -0.86
CTNND1-202ENST00000361332 ZNF397Q8NF99 534 aaPredicted RBP9.67□□□□□ -0.86
CTNND1-202ENST00000361332 CCDC148Q8NFR7 591 aa9.67□□□□□ -0.86
CTNND1-202ENST00000361332 MKNK2Q9HBH9 465 aa9.66□□□□□ -0.86
CTNND1-202ENST00000361332 IFFO1Q0D2I5 559 aa9.66□□□□□ -0.86
CTNND1-202ENST00000361332 PNISRQ8TF01 805 aaKnown RBP9.66□□□□□ -0.86
CTNND1-202ENST00000361332 TSG101Q99816 390 aa9.66□□□□□ -0.86
CTNND1-202ENST00000361332 GTPBP4Q9BZE4 634 aaKnown RBP9.66□□□□□ -0.86
CTNND1-202ENST00000361332 SAMM50Q9Y512 469 aa9.66□□□□□ -0.86
CTNND1-202ENST00000361332 FYCO1Q9BQS8 1478 aa9.66□□□□□ -0.86
CTNND1-202ENST00000361332 HIP1O00291 1037 aa9.66□□□□□ -0.86
CTNND1-202ENST00000361332 PSMC4P43686 418 aa9.66□□□□□ -0.86
CTNND1-202ENST00000361332 MAP9Q49MG5 647 aa9.66□□□□□ -0.86
CTNND1-202ENST00000361332 UPF3BQ9BZI7 483 aaKnown RBP9.66□□□□□ -0.86
CTNND1-202ENST00000361332 NUP62CLQ9H1M0 184 aa9.66□□□□□ -0.86
CTNND1-202ENST00000361332 BICD1Q96G01 975 aa9.66□□□□□ -0.86
CTNND1-202ENST00000361332 URI1O94763 535 aaPredicted RBP9.66□□□□□ -0.86
CTNND1-202ENST00000361332 SPTY2D1Q68D10 685 aaPredicted RBP9.66□□□□□ -0.86
CTNND1-202ENST00000361332 PPP1R9BQ96SB3 815 aa9.66□□□□□ -0.86
CTNND1-202ENST00000361332 SYNCQ9H7C4 482 aa9.66□□□□□ -0.86
CTNND1-202ENST00000361332 ZNF287Q9HBT7 754 aa9.66□□□□□ -0.86
CTNND1-202ENST00000361332 RUNDC1Q96C34 613 aa9.65□□□□□ -0.86
CTNND1-202ENST00000361332 GNAI1P63096 354 aa9.65□□□□□ -0.86
CTNND1-202ENST00000361332 CCDC89Q8N998 374 aa9.65□□□□□ -0.86
CTNND1-202ENST00000361332 RAD54L2Q9Y4B4 1467 aa9.65□□□□□ -0.86
CTNND1-202ENST00000361332 RPGRQ92834 1020 aaKnown RBP9.65□□□□□ -0.87
CTNND1-202ENST00000361332 ZFP91Q96JP5 570 aaPredicted RBP9.65□□□□□ -0.87
CTNND1-202ENST00000361332 ODF2LQ9ULJ1 636 aa9.65□□□□□ -0.87
CTNND1-202ENST00000361332 GCOM1H8Y6P7 765 aaPredicted RBP9.65□□□□□ -0.87
CTNND1-202ENST00000361332 DYNC1I1O14576 645 aa9.65□□□□□ -0.87
CTNND1-202ENST00000361332 MYZAPP0CAP1 466 aa9.65□□□□□ -0.87
CTNND1-202ENST00000361332 ACTN2P35609 894 aa9.65□□□□□ -0.87
CTNND1-202ENST00000361332 CCDC30Q5VVM6 783 aa9.65□□□□□ -0.87
CTNND1-202ENST00000361332 CACNA2D4Q7Z3S7 1137 aa9.64□□□□□ -0.87
CTNND1-202ENST00000361332 VPS36Q86VN1 386 aa9.64□□□□□ -0.87
CTNND1-202ENST00000361332 CKAP2LQ8IYA6 745 aa9.64□□□□□ -0.87
CTNND1-202ENST00000361332 CASQ1P31415 396 aa9.64□□□□□ -0.87
CTNND1-202ENST00000361332 FAM69CQ0P6D2 419 aa9.64□□□□□ -0.87
CTNND1-202ENST00000361332 LARP1BQ659C4 914 aaKnown RBP9.64□□□□□ -0.87
CTNND1-202ENST00000361332 SPATA32Q96LK8 384 aa9.64□□□□□ -0.87
CTNND1-202ENST00000361332 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.64□□□□□ -0.877e-6■□□□□ 8.3
CTNND1-202ENST00000361332 PRXQ9BXM0 1461 aa9.64□□□□□ -0.87
CTNND1-202ENST00000361332 RIOK3O14730 519 aaKnown RBP9.64□□□□□ -0.87
CTNND1-202ENST00000361332 SMARCC1Q92922 1105 aaPredicted RBP9.64□□□□□ -0.87
CTNND1-202ENST00000361332 ZNF622Q969S3 477 aaKnown RBP eCLIP9.64□□□□□ -0.873e-7■□□□□ 10.1
CTNND1-202ENST00000361332 IDH1O75874 414 aaKnown RBP9.63□□□□□ -0.87
CTNND1-202ENST00000361332 TPD52P55327 224 aaPredicted RBP9.63□□□□□ -0.87
CTNND1-202ENST00000361332 SPA17Q15506 151 aa9.63□□□□□ -0.87
CTNND1-202ENST00000361332 SREK1Q8WXA9 508 aaKnown RBP9.63□□□□□ -0.87
CTNND1-202ENST00000361332 SIRT1Q96EB6 747 aa9.63□□□□□ -0.87
CTNND1-202ENST00000361332 SMTNL1A8MU46 457 aa9.63□□□□□ -0.87
CTNND1-202ENST00000361332 ZSCAN12O43309 604 aa9.63□□□□□ -0.87
CTNND1-202ENST00000361332 SFPQP23246 707 aaKnown RBP eCLIP9.63□□□□□ -0.871e-8■■■□□ 15.1
CTNND1-202ENST00000361332 SNX16P57768 344 aa9.63□□□□□ -0.87
CTNND1-202ENST00000361332 ATP2B3Q16720 1220 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms