RNA–Protein interactions for RNA: ENST00000360779.3

SDCBP2-202, Transcript of syndecan binding protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDCBP2, Length 1,519 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP2-202ENST00000360779 C8orf58Q8NAV2 365 aa21.38■■□□□ 1.01
SDCBP2-202ENST00000360779 RARSP54136 660 aaKnown RBP21.37■■□□□ 1.01
SDCBP2-202ENST00000360779 NFATC2IPQ8NCF5 419 aa21.37■■□□□ 1.01
SDCBP2-202ENST00000360779 BCL2L13Q9BXK5 485 aa21.37■■□□□ 1.01
SDCBP2-202ENST00000360779 SMC4Q9NTJ3 1288 aa21.37■■□□□ 1.01
SDCBP2-202ENST00000360779 SHANK3Q9BYB0 1731 aa21.37■■□□□ 1.01
SDCBP2-202ENST00000360779 SCN11AQ9UI33 1791 aa21.37■■□□□ 1.01
SDCBP2-202ENST00000360779 VIRMAQ69YN4 1812 aaKnown RBP21.37■■□□□ 1.01
SDCBP2-202ENST00000360779 BCAR3O75815 825 aa21.36■■□□□ 1.01
SDCBP2-202ENST00000360779 TSPYL6Q8N831 410 aa21.36■■□□□ 1.01
SDCBP2-202ENST00000360779 NKX1-1Q15270 411 aaPredicted RBP21.35■■□□□ 1.01
SDCBP2-202ENST00000360779 KRT24Q2M2I5 525 aa21.35■■□□□ 1.01
SDCBP2-202ENST00000360779 GJD4Q96KN9 370 aaPredicted RBP21.35■■□□□ 1.01
SDCBP2-202ENST00000360779 ADAMTS7Q9UKP4 1686 aa21.35■■□□□ 1.01
SDCBP2-202ENST00000360779 TTC5Q8N0Z6 440 aa21.34■■□□□ 1.01
SDCBP2-202ENST00000360779 FRAT1Q92837 279 aaPredicted RBP21.34■■□□□ 1.01
SDCBP2-202ENST00000360779 QTRT2Q9H974 415 aaKnown RBP21.34■■□□□ 1.01
SDCBP2-202ENST00000360779 ATRNO75882 1429 aa21.34■■□□□ 1.01
SDCBP2-202ENST00000360779 ERVV-2B6SEH9 535 aa21.34■■□□□ 1.01
SDCBP2-202ENST00000360779 PLIN1O60240 522 aa21.34■■□□□ 1.01
SDCBP2-202ENST00000360779 VAMP4O75379 141 aa21.33■■□□□ 1
SDCBP2-202ENST00000360779 ZNF428Q96B54 188 aa21.33■■□□□ 1
SDCBP2-202ENST00000360779 MRC1P22897 1456 aa21.32■■□□□ 1
SDCBP2-202ENST00000360779 TMOD3Q9NYL9 352 aa21.32■■□□□ 1
SDCBP2-202ENST00000360779 RNF123Q5XPI4 1314 aa21.31■■□□□ 1
SDCBP2-202ENST00000360779 TCERG1O14776 1098 aaKnown RBP21.31■■□□□ 1
SDCBP2-202ENST00000360779 KCNQ3O43525 872 aa21.31■■□□□ 1
SDCBP2-202ENST00000360779 SLC39A6Q13433 755 aa21.31■■□□□ 1
SDCBP2-202ENST00000360779 ALDH1L2Q3SY69 923 aa21.31■■□□□ 1
SDCBP2-202ENST00000360779 SSH1Q8WYL5 1049 aa21.31■■□□□ 1
SDCBP2-202ENST00000360779 SYTL4Q96C24 671 aaPredicted RBP21.31■■□□□ 1
SDCBP2-202ENST00000360779 KDM3BQ7LBC6 1761 aa21.31■■□□□ 1
SDCBP2-202ENST00000360779 EIF4A1P60842 406 aaKnown RBP21.3■■□□□ 1
SDCBP2-202ENST00000360779 ZNF772Q68DY9 489 aaPredicted RBP21.3■■□□□ 1
SDCBP2-202ENST00000360779 SIPA1L3O60292 1781 aaPredicted RBP21.3■■□□□ 1
SDCBP2-202ENST00000360779 GLI3P10071 1580 aa21.29■■□□□ 1
SDCBP2-202ENST00000360779 ZNF790Q6PG37 636 aa21.29■■□□□ 1
SDCBP2-202ENST00000360779 MARCH10Q8NA82 808 aaPredicted RBP21.28■■□□□ 1
SDCBP2-202ENST00000360779 NECTIN2Q92692 538 aa21.28■■□□□ 1
SDCBP2-202ENST00000360779 STK31Q9BXU1 1019 aa21.27■■□□□ 1
SDCBP2-202ENST00000360779 SOS1Q07889 1333 aaPredicted RBP21.26■□□□□ 0.99
SDCBP2-202ENST00000360779 KIF16BQ96L93 1317 aa21.26■□□□□ 0.99
SDCBP2-202ENST00000360779 EIF2S2P20042 333 aaKnown RBP21.26■□□□□ 0.99
SDCBP2-202ENST00000360779 HDGFL1Q5TGJ6 251 aa21.25■□□□□ 0.99
SDCBP2-202ENST00000360779 CCDC30Q5VVM6 783 aa21.25■□□□□ 0.99
SDCBP2-202ENST00000360779 ACSBG1Q96GR2 724 aa21.25■□□□□ 0.99
SDCBP2-202ENST00000360779 FMNL2Q96PY5 1086 aa21.25■□□□□ 0.99
SDCBP2-202ENST00000360779 CHMP4AQ9BY43 222 aa21.25■□□□□ 0.99
SDCBP2-202ENST00000360779 TOGARAM1Q9Y4F4 1720 aa21.25■□□□□ 0.99
SDCBP2-202ENST00000360779 ZKSCAN2Q63HK3 967 aa21.24■□□□□ 0.99
SDCBP2-202ENST00000360779 SEPT12Q8IYM1 358 aa21.24■□□□□ 0.99
SDCBP2-202ENST00000360779 THSD7AQ9UPZ6 1657 aa21.24■□□□□ 0.99
SDCBP2-202ENST00000360779 IPO8O15397 1037 aaKnown RBP21.24■□□□□ 0.99
SDCBP2-202ENST00000360779 MRPL50Q8N5N7 158 aaKnown RBP21.24■□□□□ 0.99
SDCBP2-202ENST00000360779 NOB1Q9ULX3 412 aaKnown RBP21.24■□□□□ 0.99
SDCBP2-202ENST00000360779 HOXB7P09629 217 aa21.23■□□□□ 0.99
SDCBP2-202ENST00000360779 PRIM1P49642 420 aaKnown RBP21.23■□□□□ 0.99
SDCBP2-202ENST00000360779 FTSJ3Q8IY81 847 aaKnown RBP21.23■□□□□ 0.99
SDCBP2-202ENST00000360779 DOT1LQ8TEK3 1739 aa21.23■□□□□ 0.99
SDCBP2-202ENST00000360779 PIGBQ92521 554 aa21.22■□□□□ 0.99
SDCBP2-202ENST00000360779 MS4A1P11836 297 aa21.21■□□□□ 0.99
SDCBP2-202ENST00000360779 ZNF496Q96IT1 587 aaPredicted RBP21.21■□□□□ 0.99
SDCBP2-202ENST00000360779 PTCD1O75127 700 aaKnown RBP21.2■□□□□ 0.98
SDCBP2-202ENST00000360779 GIGYF1O75420 1035 aaPredicted RBP21.2■□□□□ 0.98
SDCBP2-202ENST00000360779 SLC4A2P04920 1241 aa21.2■□□□□ 0.98
SDCBP2-202ENST00000360779 RBM6P78332 1123 aaKnown RBP21.2■□□□□ 0.98
SDCBP2-202ENST00000360779 C20orf194Q5TEA3 1177 aa21.2■□□□□ 0.98
SDCBP2-202ENST00000360779 CLUAP1Q96AJ1 413 aa21.2■□□□□ 0.98
SDCBP2-202ENST00000360779 SNRPA1P09661 255 aaKnown RBP21.19■□□□□ 0.98
SDCBP2-202ENST00000360779 CRBNQ96SW2 442 aa21.19■□□□□ 0.98
SDCBP2-202ENST00000360779 RBM42Q9BTD8 480 aaKnown RBP21.19■□□□□ 0.98
SDCBP2-202ENST00000360779 PRAMEF22A3QJZ6 481 aa21.18■□□□□ 0.98
SDCBP2-202ENST00000360779 BCL9O00512 1426 aa21.18■□□□□ 0.98
SDCBP2-202ENST00000360779 ONECUT3O60422 494 aaPredicted RBP21.18■□□□□ 0.98
SDCBP2-202ENST00000360779 ATF7IPQ6VMQ6 1270 aa21.18■□□□□ 0.98
SDCBP2-202ENST00000360779 DZIP1LQ8IYY4 767 aaKnown RBP21.18■□□□□ 0.98
SDCBP2-202ENST00000360779 PANK1Q8TE04 598 aa21.18■□□□□ 0.98
SDCBP2-202ENST00000360779 BRPF1P55201 1214 aaPredicted RBP21.17■□□□□ 0.98
SDCBP2-202ENST00000360779 PDE3AQ14432 1141 aa21.17■□□□□ 0.98
SDCBP2-202ENST00000360779 FAM182BQ5T319 152 aa21.17■□□□□ 0.98
SDCBP2-202ENST00000360779 ERICH6BQ5W0A0 696 aa21.17■□□□□ 0.98
SDCBP2-202ENST00000360779 EXOC6Q8TAG9 804 aa21.17■□□□□ 0.98
SDCBP2-202ENST00000360779 ASAP1Q9ULH1 1129 aa21.17■□□□□ 0.98
SDCBP2-202ENST00000360779 ITGB4P16144 1822 aa21.17■□□□□ 0.98
SDCBP2-202ENST00000360779 HEG1Q9ULI3 1381 aa21.16■□□□□ 0.98
SDCBP2-202ENST00000360779 PAPPAQ13219 1627 aa21.16■□□□□ 0.98
SDCBP2-202ENST00000360779 ILDR1Q86SU0 546 aaPredicted RBP21.16■□□□□ 0.98
SDCBP2-202ENST00000360779 API5Q9BZZ5 524 aaKnown RBP21.16■□□□□ 0.98
SDCBP2-202ENST00000360779 ATG3Q9NT62 314 aa21.16■□□□□ 0.98
SDCBP2-202ENST00000360779 TNNQ9UQP3 1299 aa21.16■□□□□ 0.98
SDCBP2-202ENST00000360779 TRIM27P14373 513 aa21.15■□□□□ 0.98
SDCBP2-202ENST00000360779 RXRBP28702 533 aa21.15■□□□□ 0.98
SDCBP2-202ENST00000360779 CHPF2Q9P2E5 772 aa21.15■□□□□ 0.98
SDCBP2-202ENST00000360779 ARHGAP45Q92619 1136 aa21.14■□□□□ 0.97
SDCBP2-202ENST00000360779 DBF4Q9UBU7 674 aaPredicted RBP21.14■□□□□ 0.97
SDCBP2-202ENST00000360779 COG6Q9Y2V7 657 aa21.14■□□□□ 0.97
SDCBP2-202ENST00000360779 PTPRCP08575 1304 aa21.13■□□□□ 0.97
SDCBP2-202ENST00000360779 KCPQ6ZWJ8 1503 aa21.13■□□□□ 0.97
SDCBP2-202ENST00000360779 C5P01031 1676 aa21.13■□□□□ 0.97
SDCBP2-202ENST00000360779 KRT27Q7Z3Y8 459 aa21.13■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms