RNA–Protein interactions for RNA: ENST00000360515.7

CDC42SE2-201, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 3,591 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-201ENST00000360515 FLT4P35916 1363 aa8.69□□□□□ -1.02
CDC42SE2-201ENST00000360515 PDZRN3Q9UPQ7 1066 aa8.68□□□□□ -1.02
CDC42SE2-201ENST00000360515 CSB-PGBD3P0DP91 1061 aa8.68□□□□□ -1.02
CDC42SE2-201ENST00000360515 NLGN1Q8N2Q7 840 aa8.68□□□□□ -1.02
CDC42SE2-201ENST00000360515 CREBZFQ9NS37 354 aa8.68□□□□□ -1.02
CDC42SE2-201ENST00000360515 RGL2O15211 777 aa8.67□□□□□ -1.02
CDC42SE2-201ENST00000360515 SNED1Q8TER0 1413 aa8.67□□□□□ -1.02
CDC42SE2-201ENST00000360515 LINC00116Q8NCU8 138 aa8.67□□□□□ -1.02
CDC42SE2-201ENST00000360515 NLRP2Q9NX02 1062 aa8.67□□□□□ -1.02
CDC42SE2-201ENST00000360515 NME9Q86XW9 330 aa8.66□□□□□ -1.02
CDC42SE2-201ENST00000360515 POTECB2RU33 542 aa8.65□□□□□ -1.02
CDC42SE2-201ENST00000360515 CYP27B1O15528 508 aa8.65□□□□□ -1.02
CDC42SE2-201ENST00000360515 HSPA1AP0DMV8 641 aaKnown RBP8.65□□□□□ -1.02
CDC42SE2-201ENST00000360515 HSPA1BP0DMV9 641 aaKnown RBP8.65□□□□□ -1.02
CDC42SE2-201ENST00000360515 TM4SF1P30408 202 aa8.65□□□□□ -1.02
CDC42SE2-201ENST00000360515 NMRK2Q9NPI5 230 aa8.65□□□□□ -1.02
CDC42SE2-201ENST00000360515 TERF2IPQ9NYB0 399 aa8.65□□□□□ -1.02
CDC42SE2-201ENST00000360515 CCDC87Q9NVE4 849 aa8.65□□□□□ -1.02
CDC42SE2-201ENST00000360515 WWC3Q9ULE0 1092 aa8.65□□□□□ -1.02
CDC42SE2-201ENST00000360515 HDGFL2Q7Z4V5 671 aaPredicted RBP8.65□□□□□ -1.03
CDC42SE2-201ENST00000360515 L3MBTL3Q96JM7 780 aaPredicted RBP8.65□□□□□ -1.03
CDC42SE2-201ENST00000360515 GLTPD2A6NH11 291 aa8.64□□□□□ -1.03
CDC42SE2-201ENST00000360515 ERVV-2B6SEH9 535 aa8.64□□□□□ -1.03
CDC42SE2-201ENST00000360515 RIC1Q4ADV7 1423 aa8.64□□□□□ -1.03
CDC42SE2-201ENST00000360515 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.64□□□□□ -1.03
CDC42SE2-201ENST00000360515 RPS6KA4O75676 772 aa8.64□□□□□ -1.03
CDC42SE2-201ENST00000360515 NBPF6Q5VWK0 638 aa8.64□□□□□ -1.03
CDC42SE2-201ENST00000360515 NBPF4Q96M43 638 aa8.64□□□□□ -1.03
CDC42SE2-201ENST00000360515 CEP350Q5VT06 3117 aa8.63□□□□□ -1.03
CDC42SE2-201ENST00000360515 GYS1P13807 737 aa8.63□□□□□ -1.03
CDC42SE2-201ENST00000360515 TESK2Q96S53 571 aa8.63□□□□□ -1.03
CDC42SE2-201ENST00000360515 ROCK2O75116 1388 aaKnown RBP8.63□□□□□ -1.03
CDC42SE2-201ENST00000360515 LOC102724428A0A0B4J2F2 783 aa8.63□□□□□ -1.03
CDC42SE2-201ENST00000360515 SIK1P57059 783 aa8.63□□□□□ -1.03
CDC42SE2-201ENST00000360515 PIGBQ92521 554 aa8.63□□□□□ -1.03
CDC42SE2-201ENST00000360515 ITPK1Q13572 414 aa8.63□□□□□ -1.03
CDC42SE2-201ENST00000360515 AK7Q96M32 723 aa8.63□□□□□ -1.03
CDC42SE2-201ENST00000360515 C9orf131Q5VYM1 1079 aa8.62□□□□□ -1.03
CDC42SE2-201ENST00000360515 WASHC2AQ641Q2 1341 aa8.62□□□□□ -1.03
CDC42SE2-201ENST00000360515 PLEKHG5O94827 1062 aa8.62□□□□□ -1.03
CDC42SE2-201ENST00000360515 WBP1LQ9NX94 342 aa8.62□□□□□ -1.03
CDC42SE2-201ENST00000360515 PIM2Q9P1W9 311 aa8.62□□□□□ -1.03
CDC42SE2-201ENST00000360515 LAMB4A4D0S4 1761 aa8.62□□□□□ -1.03
CDC42SE2-201ENST00000360515 USP42Q9H9J4 1324 aaKnown RBP8.61□□□□□ -1.03
CDC42SE2-201ENST00000360515 RASSF10A6NK89 507 aa8.61□□□□□ -1.03
CDC42SE2-201ENST00000360515 TATP17735 454 aaPredicted RBP8.61□□□□□ -1.03
CDC42SE2-201ENST00000360515 DDX60Q8IY21 1712 aaKnown RBP8.61□□□□□ -1.03
CDC42SE2-201ENST00000360515 DPEP1P16444 411 aa8.61□□□□□ -1.03
CDC42SE2-201ENST00000360515 TMF1P82094 1093 aa8.61□□□□□ -1.03
CDC42SE2-201ENST00000360515 CTCFP49711 727 aaPredicted RBP8.6□□□□□ -1.03
CDC42SE2-201ENST00000360515 ATG3Q9NT62 314 aa8.6□□□□□ -1.03
CDC42SE2-201ENST00000360515 LRRC37AA6NMS7 1700 aa8.6□□□□□ -1.03
CDC42SE2-201ENST00000360515 VEGFAP15692 232 aaPredicted RBP8.6□□□□□ -1.03
CDC42SE2-201ENST00000360515 MMP10P09238 476 aa8.6□□□□□ -1.03
CDC42SE2-201ENST00000360515 LMNB1P20700 586 aa8.6□□□□□ -1.03
CDC42SE2-201ENST00000360515 POLRMTO00411 1230 aaKnown RBP8.59□□□□□ -1.03
CDC42SE2-201ENST00000360515 SLC4A9Q96Q91 983 aa8.59□□□□□ -1.03
CDC42SE2-201ENST00000360515 DALRD3Q5D0E6 543 aaKnown RBP8.59□□□□□ -1.03
CDC42SE2-201ENST00000360515 HHIPL1Q96JK4 782 aa8.59□□□□□ -1.03
CDC42SE2-201ENST00000360515 CACNA1SQ13698 1873 aa8.59□□□□□ -1.04
CDC42SE2-201ENST00000360515 PHKG2P15735 406 aa8.58□□□□□ -1.04
CDC42SE2-201ENST00000360515 MSL1Q68DK7 614 aa8.58□□□□□ -1.04
CDC42SE2-201ENST00000360515 C16orf71Q8IYS4 520 aaPredicted RBP8.58□□□□□ -1.04
CDC42SE2-201ENST00000360515 PELP1Q8IZL8 1130 aaKnown RBP8.58□□□□□ -1.04
CDC42SE2-201ENST00000360515 DDX54Q8TDD1 881 aaKnown RBP8.58□□□□□ -1.04
CDC42SE2-201ENST00000360515 COG3Q96JB2 828 aa8.58□□□□□ -1.04
CDC42SE2-201ENST00000360515 SPG7Q9UQ90 795 aa8.58□□□□□ -1.04
CDC42SE2-201ENST00000360515 DUOX1Q9NRD9 1551 aa8.58□□□□□ -1.04
CDC42SE2-201ENST00000360515 L3MBTL2Q969R5 705 aa8.58□□□□□ -1.04
CDC42SE2-201ENST00000360515 UTRNP46939 3433 aa8.58□□□□□ -1.04
CDC42SE2-201ENST00000360515 SLX4Q8IY92 1834 aa8.58□□□□□ -1.04
CDC42SE2-201ENST00000360515 ANKRD36CQ5JPF3 1778 aa8.57□□□□□ -1.04
CDC42SE2-201ENST00000360515 FYB1O15117 783 aa8.57□□□□□ -1.04
CDC42SE2-201ENST00000360515 HSPA8P11142 646 aaKnown RBP8.57□□□□□ -1.04
CDC42SE2-201ENST00000360515 TRAPPC3LQ5T215 181 aa8.57□□□□□ -1.04
CDC42SE2-201ENST00000360515 CHADLQ6NUI6 762 aa8.57□□□□□ -1.04
CDC42SE2-201ENST00000360515 RAPGEF4Q8WZA2 1011 aa8.57□□□□□ -1.04
CDC42SE2-201ENST00000360515 ARHGEF1Q92888 912 aaKnown RBP8.57□□□□□ -1.04
CDC42SE2-201ENST00000360515 PSME4Q14997 1843 aa8.57□□□□□ -1.04
CDC42SE2-201ENST00000360515 SOS1Q07889 1333 aaPredicted RBP8.57□□□□□ -1.04
CDC42SE2-201ENST00000360515 KLRG2A4D1S0 409 aaPredicted RBP8.56□□□□□ -1.04
CDC42SE2-201ENST00000360515 HSP90AB1P08238 724 aaKnown RBP8.56□□□□□ -1.04
CDC42SE2-201ENST00000360515 DDR1Q08345 913 aa8.56□□□□□ -1.04
CDC42SE2-201ENST00000360515 RRAGCQ9HB90 399 aa8.56□□□□□ -1.04
CDC42SE2-201ENST00000360515 FOXN1O15353 648 aa8.56□□□□□ -1.04
CDC42SE2-201ENST00000360515 ZNF609O15014 1411 aa8.56□□□□□ -1.04
CDC42SE2-201ENST00000360515 KCNQ4P56696 695 aa8.56□□□□□ -1.04
CDC42SE2-201ENST00000360515 RTCBQ9Y3I0 505 aaKnown RBP8.56□□□□□ -1.04
CDC42SE2-201ENST00000360515 ITGBL1O95965 494 aaPredicted RBP8.55□□□□□ -1.04
CDC42SE2-201ENST00000360515 VSIG10Q8N0Z9 540 aa8.55□□□□□ -1.04
CDC42SE2-201ENST00000360515 KDM3BQ7LBC6 1761 aa8.55□□□□□ -1.04
CDC42SE2-201ENST00000360515 IFNL2Q8IZJ0 200 aa8.55□□□□□ -1.04
CDC42SE2-201ENST00000360515 PARP3Q9Y6F1 533 aa8.55□□□□□ -1.04
CDC42SE2-201ENST00000360515 A0A0G2JLW4 131 aa8.55□□□□□ -1.04
CDC42SE2-201ENST00000360515 NFKBIEO00221 500 aa8.55□□□□□ -1.04
CDC42SE2-201ENST00000360515 LDHDQ86WU2 507 aa8.55□□□□□ -1.04
CDC42SE2-201ENST00000360515 ARHGAP27Q6ZUM4 889 aa8.54□□□□□ -1.04
CDC42SE2-201ENST00000360515 SLC12A5Q9H2X9 1139 aa8.54□□□□□ -1.04
CDC42SE2-201ENST00000360515 ZNF646O15015 1829 aaPredicted RBP8.54□□□□□ -1.04
CDC42SE2-201ENST00000360515 FCHSD2O94868 740 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms