RNA–Protein interactions for RNA: ENST00000360218.2

CTSE-202, Transcript of cathepsin E, humanhuman

TSL 1 (best) BASIC

Gene CTSE, Length 2,071 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSE-202ENST00000360218 NLRP2Q9NX02 1062 aa13.99□□□□□ -0.17
CTSE-202ENST00000360218 F6X3S4 739 aa13.98□□□□□ -0.17
CTSE-202ENST00000360218 CCDC30Q5VVM6 783 aa13.98□□□□□ -0.17
CTSE-202ENST00000360218 SLAIN2Q9P270 581 aa13.98□□□□□ -0.17
CTSE-202ENST00000360218 OVOS2A0A0G2JMS6 1433 aa13.98□□□□□ -0.17
CTSE-202ENST00000360218 SCN11AQ9UI33 1791 aa13.97□□□□□ -0.17
CTSE-202ENST00000360218 MEGF6O75095 1541 aa13.97□□□□□ -0.17
CTSE-202ENST00000360218 KCNQ3O43525 872 aa13.97□□□□□ -0.17
CTSE-202ENST00000360218 TEFQ10587 303 aa13.97□□□□□ -0.17
CTSE-202ENST00000360218 NOP58Q9Y2X3 529 aaKnown RBP13.97□□□□□ -0.17
CTSE-202ENST00000360218 SOS1Q07889 1333 aaPredicted RBP13.97□□□□□ -0.17
CTSE-202ENST00000360218 ATP10DQ9P241 1426 aa13.97□□□□□ -0.17
CTSE-202ENST00000360218 NHSL1Q5SYE7 1610 aa13.97□□□□□ -0.17
CTSE-202ENST00000360218 EIF4A1P60842 406 aaKnown RBP13.97□□□□□ -0.17
CTSE-202ENST00000360218 NUCB1Q02818 461 aa13.97□□□□□ -0.17
CTSE-202ENST00000360218 BTBD11A6QL63 1104 aa13.96□□□□□ -0.17
CTSE-202ENST00000360218 CSB-PGBD3P0DP91 1061 aa13.96□□□□□ -0.17
CTSE-202ENST00000360218 FLIIQ13045 1269 aa13.96□□□□□ -0.17
CTSE-202ENST00000360218 SLC4A10Q6U841 1118 aa13.96□□□□□ -0.17
CTSE-202ENST00000360218 CPDO75976 1380 aa13.96□□□□□ -0.17
CTSE-202ENST00000360218 PKD1L3Q7Z443 1732 aa13.96□□□□□ -0.18
CTSE-202ENST00000360218 HDGFL1Q5TGJ6 251 aa13.95□□□□□ -0.18
CTSE-202ENST00000360218 MEIS3Q99687 375 aa13.95□□□□□ -0.18
CTSE-202ENST00000360218 SOS2Q07890 1332 aaPredicted RBP13.95□□□□□ -0.18
CTSE-202ENST00000360218 SEC24BO95487 1268 aa13.95□□□□□ -0.18
CTSE-202ENST00000360218 CHD1LQ86WJ1 897 aa13.95□□□□□ -0.18
CTSE-202ENST00000360218 RAPGEF4Q8WZA2 1011 aa13.95□□□□□ -0.18
CTSE-202ENST00000360218 LNPKQ9C0E8 428 aa13.95□□□□□ -0.18
CTSE-202ENST00000360218 GCC1Q96CN9 775 aa13.94□□□□□ -0.18
CTSE-202ENST00000360218 TATP17735 454 aaPredicted RBP13.94□□□□□ -0.18
CTSE-202ENST00000360218 FKBP5Q13451 457 aaPredicted RBP13.94□□□□□ -0.18
CTSE-202ENST00000360218 KDM6AO15550 1401 aaPredicted RBP13.93□□□□□ -0.18
CTSE-202ENST00000360218 EIF2S2P20042 333 aaKnown RBP13.93□□□□□ -0.18
CTSE-202ENST00000360218 CCT4P50991 539 aaKnown RBP13.93□□□□□ -0.18
CTSE-202ENST00000360218 ANKRD45Q5TZF3 282 aa13.93□□□□□ -0.18
CTSE-202ENST00000360218 ZBTB47Q9UFB7 747 aaPredicted RBP13.93□□□□□ -0.18
CTSE-202ENST00000360218 CEP85Q6P2H3 762 aa13.92□□□□□ -0.18
CTSE-202ENST00000360218 ANKRD44Q8N8A2 993 aa13.92□□□□□ -0.18
CTSE-202ENST00000360218 PHAXQ9H814 394 aaKnown RBP13.92□□□□□ -0.18
CTSE-202ENST00000360218 PXDNLA1KZ92 1463 aa13.92□□□□□ -0.18
CTSE-202ENST00000360218 PARP4Q9UKK3 1724 aaKnown RBP13.92□□□□□ -0.18
CTSE-202ENST00000360218 C5P01031 1676 aa13.91□□□□□ -0.18
CTSE-202ENST00000360218 HOXB7P09629 217 aa13.91□□□□□ -0.18
CTSE-202ENST00000360218 PHKG2P15735 406 aa13.91□□□□□ -0.18
CTSE-202ENST00000360218 PRDM11Q9NQV5 511 aa13.91□□□□□ -0.18
CTSE-202ENST00000360218 CHPF2Q9P2E5 772 aa13.91□□□□□ -0.18
CTSE-202ENST00000360218 SPG7Q9UQ90 795 aa13.91□□□□□ -0.18
CTSE-202ENST00000360218 RPAP2Q8IXW5 612 aaPredicted RBP13.9□□□□□ -0.18
CTSE-202ENST00000360218 HEG1Q9ULI3 1381 aa13.89□□□□□ -0.19
CTSE-202ENST00000360218 COL5A2P05997 1499 aaPredicted RBP13.89□□□□□ -0.19
CTSE-202ENST00000360218 ANXA1P04083 346 aa13.89□□□□□ -0.19
CTSE-202ENST00000360218 DDRGK1Q96HY6 314 aa13.89□□□□□ -0.19
CTSE-202ENST00000360218 DCTPP1Q9H773 170 aa13.89□□□□□ -0.19
CTSE-202ENST00000360218 PRAMEF22A3QJZ6 481 aa13.88□□□□□ -0.19
CTSE-202ENST00000360218 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.88□□□□□ -0.19
CTSE-202ENST00000360218 MRC1P22897 1456 aa13.88□□□□□ -0.19
CTSE-202ENST00000360218 IFNL2Q8IZJ0 200 aa13.87□□□□□ -0.19
CTSE-202ENST00000360218 WDR17Q8IZU2 1322 aa13.87□□□□□ -0.19
CTSE-202ENST00000360218 CYP27B1O15528 508 aa13.87□□□□□ -0.19
CTSE-202ENST00000360218 GIGYF1O75420 1035 aaPredicted RBP13.87□□□□□ -0.19
CTSE-202ENST00000360218 SLC52A2Q9HAB3 445 aa13.87□□□□□ -0.19
CTSE-202ENST00000360218 SHANK3Q9BYB0 1731 aa13.87□□□□□ -0.19
CTSE-202ENST00000360218 PLEKHG2Q9H7P9 1386 aa13.86□□□□□ -0.19
CTSE-202ENST00000360218 GNAI2P04899 355 aa13.86□□□□□ -0.19
CTSE-202ENST00000360218 SLC39A6Q13433 755 aa13.86□□□□□ -0.19
CTSE-202ENST00000360218 ROBO1Q9Y6N7 1651 aa13.86□□□□□ -0.19
CTSE-202ENST00000360218 TOM1L2Q6ZVM7 507 aa13.86□□□□□ -0.19
CTSE-202ENST00000360218 PROSER3Q2NL68 480 aa13.85□□□□□ -0.19
CTSE-202ENST00000360218 NFATC2IPQ8NCF5 419 aa13.85□□□□□ -0.19
CTSE-202ENST00000360218 ADCY9O60503 1353 aa13.85□□□□□ -0.19
CTSE-202ENST00000360218 GNAI3P08754 354 aa13.84□□□□□ -0.19
CTSE-202ENST00000360218 APBB1O00213 710 aa13.84□□□□□ -0.19
CTSE-202ENST00000360218 ZNF790Q6PG37 636 aa13.84□□□□□ -0.19
CTSE-202ENST00000360218 DCAF5Q96JK2 942 aa13.84□□□□□ -0.19
CTSE-202ENST00000360218 CHMP4AQ9BY43 222 aa13.84□□□□□ -0.19
CTSE-202ENST00000360218 DBF4Q9UBU7 674 aaPredicted RBP13.84□□□□□ -0.19
CTSE-202ENST00000360218 PI4KAP2A4QPH2 592 aa13.83□□□□□ -0.2
CTSE-202ENST00000360218 SMARCA5O60264 1052 aaPredicted RBP13.83□□□□□ -0.2
CTSE-202ENST00000360218 HMMRO75330 724 aa13.83□□□□□ -0.2
CTSE-202ENST00000360218 SLC4A3P48751 1232 aa13.83□□□□□ -0.2
CTSE-202ENST00000360218 BMP2KLQ5H9B9 411 aa13.83□□□□□ -0.2
CTSE-202ENST00000360218 C16orf71Q8IYS4 520 aaPredicted RBP13.83□□□□□ -0.2
CTSE-202ENST00000360218 PI4KAP1Q8N8J0 262 aa13.83□□□□□ -0.2
CTSE-202ENST00000360218 USP44Q9H0E7 712 aa13.83□□□□□ -0.2
CTSE-202ENST00000360218 LRRFIP2Q9Y608 721 aaKnown RBP13.83□□□□□ -0.2
CTSE-202ENST00000360218 GLI3P10071 1580 aa13.83□□□□□ -0.2
CTSE-202ENST00000360218 DNAAF4Q8WXU2 420 aa13.83□□□□□ -0.2
CTSE-202ENST00000360218 SRCIN1Q9C0H9 1055 aa13.83□□□□□ -0.2
CTSE-202ENST00000360218 STRN4Q9NRL3 753 aa13.83□□□□□ -0.2
CTSE-202ENST00000360218 MFAP1P55081 439 aaKnown RBP13.82□□□□□ -0.2
CTSE-202ENST00000360218 PLEKHM2Q8IWE5 1019 aa13.82□□□□□ -0.2
CTSE-202ENST00000360218 OTUD7AQ8TE49 926 aaPredicted RBP13.82□□□□□ -0.2
CTSE-202ENST00000360218 TBC1D32Q96NH3 1257 aa13.82□□□□□ -0.2
CTSE-202ENST00000360218 UPF2Q9HAU5 1272 aaKnown RBP13.82□□□□□ -0.2
CTSE-202ENST00000360218 LAMB4A4D0S4 1761 aa13.81□□□□□ -0.2
CTSE-202ENST00000360218 PNMA6EA0A0J9YXQ4 647 aa13.81□□□□□ -0.2
CTSE-202ENST00000360218 UBTFL1P0CB47 393 aaPredicted RBP13.81□□□□□ -0.2
CTSE-202ENST00000360218 BEND3Q5T5X7 828 aa13.81□□□□□ -0.2
CTSE-202ENST00000360218 LARP1Q6PKG0 1096 aaKnown RBP13.81□□□□□ -0.2
CTSE-202ENST00000360218 HSP90AB1P08238 724 aaKnown RBP13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms