RNA–Protein interactions for RNA: ENST00000359979.8

CCSER2-202, Transcript of coiled-coil serine rich protein 2, humanhuman

TSL 1 (best) BASIC

Gene CCSER2, Length 2,066 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER2-202ENST00000359979 TBX22Q9Y458 520 aa27.47■■□□□ 1.99
CCSER2-202ENST00000359979 DIP2AQ14689 1571 aa27.46■■□□□ 1.99
CCSER2-202ENST00000359979 ARHGAP23Q9P227 1491 aa27.45■■□□□ 1.99
CCSER2-202ENST00000359979 NGDNQ8NEJ9 315 aaKnown RBP27.45■■□□□ 1.99
CCSER2-202ENST00000359979 SLC26A8Q96RN1 970 aa27.45■■□□□ 1.99
CCSER2-202ENST00000359979 PIK3C2AO00443 1686 aa27.45■■□□□ 1.98
CCSER2-202ENST00000359979 FAM208AQ9UK61 1670 aaKnown RBP27.45■■□□□ 1.98
CCSER2-202ENST00000359979 FLIIQ13045 1269 aa27.45■■□□□ 1.98
CCSER2-202ENST00000359979 ESPNB1AK53 854 aa27.44■■□□□ 1.98
CCSER2-202ENST00000359979 LRRCC1Q9C099 1032 aa27.44■■□□□ 1.98
CCSER2-202ENST00000359979 ZNF445P59923 1031 aa27.44■■□□□ 1.98
CCSER2-202ENST00000359979 TRIM44Q96DX7 344 aaPredicted RBP27.44■■□□□ 1.98
CCSER2-202ENST00000359979 PXDNLA1KZ92 1463 aa27.43■■□□□ 1.98
CCSER2-202ENST00000359979 XRN1Q8IZH2 1706 aaKnown RBP27.43■■□□□ 1.98
CCSER2-202ENST00000359979 GNAT3A8MTJ3 354 aa27.43■■□□□ 1.98
CCSER2-202ENST00000359979 ATP8B2P98198 1209 aa27.43■■□□□ 1.98
CCSER2-202ENST00000359979 MCTP1Q6DN14 999 aa27.43■■□□□ 1.98
CCSER2-202ENST00000359979 MCM2P49736 904 aa27.42■■□□□ 1.98
CCSER2-202ENST00000359979 LMBRD1Q9NUN5 540 aa27.42■■□□□ 1.98
CCSER2-202ENST00000359979 N4BP2Q86UW6 1770 aaPredicted RBP27.42■■□□□ 1.98
CCSER2-202ENST00000359979 CCDC173Q0VFZ6 552 aa27.42■■□□□ 1.98
CCSER2-202ENST00000359979 TUBGCP6Q96RT7 1819 aa27.41■■□□□ 1.98
CCSER2-202ENST00000359979 ANKARQ7Z5J8 1434 aa27.41■■□□□ 1.98
CCSER2-202ENST00000359979 EXOC6BQ9Y2D4 811 aa27.41■■□□□ 1.98
CCSER2-202ENST00000359979 CEBPAP49715 358 aaPredicted RBP27.4■■□□□ 1.98
CCSER2-202ENST00000359979 FKBP5Q13451 457 aaPredicted RBP27.4■■□□□ 1.98
CCSER2-202ENST00000359979 SRCIN1Q9C0H9 1055 aa27.4■■□□□ 1.98
CCSER2-202ENST00000359979 MX1P20591 662 aa27.4■■□□□ 1.98
CCSER2-202ENST00000359979 PPP1R9BQ96SB3 815 aa27.4■■□□□ 1.98
CCSER2-202ENST00000359979 ESYT1Q9BSJ8 1104 aa27.4■■□□□ 1.98
CCSER2-202ENST00000359979 STAP2Q9UGK3 403 aa27.4■■□□□ 1.98
CCSER2-202ENST00000359979 USP54Q70EL1 1684 aa27.39■■□□□ 1.98
CCSER2-202ENST00000359979 CACNA1FO60840 1977 aa27.39■■□□□ 1.98
CCSER2-202ENST00000359979 NASPP49321 788 aaPredicted RBP27.39■■□□□ 1.97
CCSER2-202ENST00000359979 ANAPC15P60006 121 aa27.39■■□□□ 1.97
CCSER2-202ENST00000359979 ZGPATQ8N5A5 531 aaKnown RBP27.39■■□□□ 1.97
CCSER2-202ENST00000359979 MAP3K5Q99683 1374 aa27.38■■□□□ 1.97
CCSER2-202ENST00000359979 MCCP23508 829 aa27.38■■□□□ 1.97
CCSER2-202ENST00000359979 PKP1Q13835 747 aa27.38■■□□□ 1.97
CCSER2-202ENST00000359979 IL17RAQ96F46 866 aa27.38■■□□□ 1.97
CCSER2-202ENST00000359979 NWD1Q149M9 1564 aa27.38■■□□□ 1.97
CCSER2-202ENST00000359979 AOX1Q06278 1338 aa27.38■■□□□ 1.97
CCSER2-202ENST00000359979 HOXC9P31274 260 aa27.37■■□□□ 1.97
CCSER2-202ENST00000359979 AK9Q5TCS8 1911 aa27.37■■□□□ 1.97
CCSER2-202ENST00000359979 ANP32BQ92688 251 aaKnown RBP27.36■■□□□ 1.97
CCSER2-202ENST00000359979 ZDHHC9Q9Y397 364 aa27.36■■□□□ 1.97
CCSER2-202ENST00000359979 PNMA6EA0A0J9YXQ4 647 aa27.36■■□□□ 1.97
CCSER2-202ENST00000359979 EPB41L2O43491 1005 aaKnown RBP27.36■■□□□ 1.97
CCSER2-202ENST00000359979 NLRP6P59044 892 aa27.36■■□□□ 1.97
CCSER2-202ENST00000359979 RGPD8O14715 1765 aaPredicted RBP27.35■■□□□ 1.97
CCSER2-202ENST00000359979 TAF7Q15545 349 aaPredicted RBP27.35■■□□□ 1.97
CCSER2-202ENST00000359979 ERBB4Q15303 1308 aa27.35■■□□□ 1.97
CCSER2-202ENST00000359979 CHMLP26374 656 aa27.34■■□□□ 1.97
CCSER2-202ENST00000359979 NEK4P51957 841 aa27.34■■□□□ 1.97
CCSER2-202ENST00000359979 ZSCAN23Q3MJ62 389 aa27.34■■□□□ 1.97
CCSER2-202ENST00000359979 PLPPR3Q6T4P5 718 aa27.34■■□□□ 1.97
CCSER2-202ENST00000359979 IL17REQ8NFR9 667 aa27.33■■□□□ 1.97
CCSER2-202ENST00000359979 CUL4AQ13619 759 aa27.32■■□□□ 1.96
CCSER2-202ENST00000359979 TMX3Q96JJ7 454 aa27.32■■□□□ 1.96
CCSER2-202ENST00000359979 CAVIN1Q6NZI2 390 aaKnown RBP27.32■■□□□ 1.96
CCSER2-202ENST00000359979 LRRFIP2Q9Y608 721 aaKnown RBP27.32■■□□□ 1.96
CCSER2-202ENST00000359979 MARF1Q9Y4F3 1742 aaKnown RBP27.32■■□□□ 1.96
CCSER2-202ENST00000359979 INTS4Q96HW7 963 aaKnown RBP27.31■■□□□ 1.96
CCSER2-202ENST00000359979 USP44Q9H0E7 712 aa27.31■■□□□ 1.96
CCSER2-202ENST00000359979 TSHZ3Q63HK5 1081 aa27.3■■□□□ 1.96
CCSER2-202ENST00000359979 SSH3Q8TE77 659 aa27.29■■□□□ 1.96
CCSER2-202ENST00000359979 PRPF40AO75400 957 aaKnown RBP27.29■■□□□ 1.96
CCSER2-202ENST00000359979 UBTFL1P0CB47 393 aaPredicted RBP27.29■■□□□ 1.96
CCSER2-202ENST00000359979 NCLP19338 710 aaKnown RBP27.29■■□□□ 1.96
CCSER2-202ENST00000359979 KDM4FA0A1W2PPD8 638 aa27.28■■□□□ 1.96
CCSER2-202ENST00000359979 TRIM6-TRIM34B2RNG4 842 aa27.28■■□□□ 1.96
CCSER2-202ENST00000359979 RAB11FIP3O75154 756 aa27.28■■□□□ 1.96
CCSER2-202ENST00000359979 NAP1L5Q96NT1 182 aaPredicted RBP27.28■■□□□ 1.96
CCSER2-202ENST00000359979 THEMISQ8N1K5 641 aaPredicted RBP27.27■■□□□ 1.96
CCSER2-202ENST00000359979 GPT2Q8TD30 523 aa27.27■■□□□ 1.96
CCSER2-202ENST00000359979 RILPL2Q969X0 211 aa27.27■■□□□ 1.96
CCSER2-202ENST00000359979 ANO2Q9NQ90 1003 aa27.27■■□□□ 1.96
CCSER2-202ENST00000359979 NECTIN2Q92692 538 aa27.26■■□□□ 1.95
CCSER2-202ENST00000359979 BRD1O95696 1058 aa27.26■■□□□ 1.95
CCSER2-202ENST00000359979 HDGFL1Q5TGJ6 251 aa27.25■■□□□ 1.95
CCSER2-202ENST00000359979 CHMP4AQ9BY43 222 aa27.25■■□□□ 1.95
CCSER2-202ENST00000359979 PALD1Q9ULE6 856 aa27.25■■□□□ 1.95
CCSER2-202ENST00000359979 POLA2Q14181 598 aa27.25■■□□□ 1.95
CCSER2-202ENST00000359979 CEMIPQ8WUJ3 1361 aa27.24■■□□□ 1.95
CCSER2-202ENST00000359979 MBD3O95983 291 aa27.24■■□□□ 1.95
CCSER2-202ENST00000359979 HOXB7P09629 217 aa27.23■■□□□ 1.95
CCSER2-202ENST00000359979 HS1BP3Q53T59 392 aa27.23■■□□□ 1.95
CCSER2-202ENST00000359979 ABTB2Q8N961 1025 aa27.23■■□□□ 1.95
CCSER2-202ENST00000359979 ZSCAN30Q86W11 494 aa27.22■■□□□ 1.95
CCSER2-202ENST00000359979 MED1Q15648 1581 aaPredicted RBP27.22■■□□□ 1.95
CCSER2-202ENST00000359979 UNC5CLQ8IV45 518 aa27.2■■□□□ 1.95
CCSER2-202ENST00000359979 HSPA4P34932 840 aa27.2■■□□□ 1.94
CCSER2-202ENST00000359979 LRSAM1Q6UWE0 723 aa27.2■■□□□ 1.94
CCSER2-202ENST00000359979 RBSNQ9H1K0 784 aa27.2■■□□□ 1.94
CCSER2-202ENST00000359979 PRIM1P49642 420 aaKnown RBP27.19■■□□□ 1.94
CCSER2-202ENST00000359979 NUTM2GQ5VZR2 741 aa27.19■■□□□ 1.94
CCSER2-202ENST00000359979 PHAXQ9H814 394 aaKnown RBP27.19■■□□□ 1.94
CCSER2-202ENST00000359979 PPP1R42Q7Z4L9 355 aa27.18■■□□□ 1.94
CCSER2-202ENST00000359979 PDLIM2Q96JY6 352 aa27.18■■□□□ 1.94
CCSER2-202ENST00000359979 KIF1BPQ96EK5 621 aa27.18■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms