RNA–Protein interactions for RNA: ENST00000359875.9

HHLA3-201, Transcript of HERV-H LTR-associating 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HHLA3, Length 898 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HHLA3-201ENST00000359875 CABP1Q9NZU7 370 aa9.54□□□□□ -0.88
HHLA3-201ENST00000359875 CRB1P82279 1406 aa9.54□□□□□ -0.88
HHLA3-201ENST00000359875 EN1Q05925 392 aaPredicted RBP9.53□□□□□ -0.88
HHLA3-201ENST00000359875 LARP1Q6PKG0 1096 aaKnown RBP9.53□□□□□ -0.88
HHLA3-201ENST00000359875 KCNH5Q8NCM2 988 aa9.53□□□□□ -0.88
HHLA3-201ENST00000359875 USP35Q9P2H5 1018 aa9.53□□□□□ -0.88
HHLA3-201ENST00000359875 TTC21AQ8NDW8 1320 aa9.53□□□□□ -0.88
HHLA3-201ENST00000359875 CAMK2BQ13554 666 aa9.52□□□□□ -0.89
HHLA3-201ENST00000359875 FAM182BQ5T319 152 aa9.52□□□□□ -0.89
HHLA3-201ENST00000359875 CAMKK2Q96RR4 588 aa9.52□□□□□ -0.89
HHLA3-201ENST00000359875 CDCA7Q9BWT1 371 aaPredicted RBP9.52□□□□□ -0.89
HHLA3-201ENST00000359875 ABCC6O95255 1503 aa9.51□□□□□ -0.89
HHLA3-201ENST00000359875 PARP4Q9UKK3 1724 aaKnown RBP9.51□□□□□ -0.89
HHLA3-201ENST00000359875 OVOS2A0A0G2JMS6 1433 aa9.51□□□□□ -0.89
HHLA3-201ENST00000359875 OVOS2A0A0J9YW53 1432 aa9.51□□□□□ -0.89
HHLA3-201ENST00000359875 OVOS2Q6IE36 1432 aa9.51□□□□□ -0.89
HHLA3-201ENST00000359875 TRIM37O94972 964 aa9.51□□□□□ -0.89
HHLA3-201ENST00000359875 PTPREP23469 700 aa9.51□□□□□ -0.89
HHLA3-201ENST00000359875 KCNK17Q96T54 332 aa9.51□□□□□ -0.89
HHLA3-201ENST00000359875 SLC4A5Q9BY07 1137 aa9.51□□□□□ -0.89
HHLA3-201ENST00000359875 CPSF1Q10570 1443 aaKnown RBP9.5□□□□□ -0.89
HHLA3-201ENST00000359875 APBA3O96018 575 aa9.5□□□□□ -0.89
HHLA3-201ENST00000359875 PSEN2P49810 448 aa9.5□□□□□ -0.89
HHLA3-201ENST00000359875 EZH2Q15910 746 aaKnown RBP9.5□□□□□ -0.89
HHLA3-201ENST00000359875 ZDHHC16Q969W1 377 aa9.5□□□□□ -0.89
HHLA3-201ENST00000359875 EMILIN3Q9NT22 766 aa9.5□□□□□ -0.89
HHLA3-201ENST00000359875 PIK3C2AO00443 1686 aa9.5□□□□□ -0.89
HHLA3-201ENST00000359875 WDR17Q8IZU2 1322 aa9.5□□□□□ -0.89
HHLA3-201ENST00000359875 BCL9O00512 1426 aa9.49□□□□□ -0.89
HHLA3-201ENST00000359875 NBPF14Q5TI25 921 aa9.49□□□□□ -0.89
HHLA3-201ENST00000359875 SIN3AQ96ST3 1273 aa9.49□□□□□ -0.89
HHLA3-201ENST00000359875 TTC21BQ7Z4L5 1316 aa9.49□□□□□ -0.89
HHLA3-201ENST00000359875 R3HDM1Q15032 1099 aaKnown RBP9.48□□□□□ -0.89
HHLA3-201ENST00000359875 DDB1Q16531 1140 aa9.48□□□□□ -0.89
HHLA3-201ENST00000359875 DMRTA1Q5VZB9 504 aa9.48□□□□□ -0.89
HHLA3-201ENST00000359875 TOM1L2Q6ZVM7 507 aa9.48□□□□□ -0.89
HHLA3-201ENST00000359875 ARHGEF25Q86VW2 580 aa9.48□□□□□ -0.89
HHLA3-201ENST00000359875 FBXW7Q969H0 707 aa9.48□□□□□ -0.89
HHLA3-201ENST00000359875 RREB1Q92766 1687 aa9.48□□□□□ -0.89
HHLA3-201ENST00000359875 KTN1Q86UP2 1357 aaKnown RBP9.48□□□□□ -0.89
HHLA3-201ENST00000359875 CCDC7Q96M83 1385 aa9.48□□□□□ -0.89
HHLA3-201ENST00000359875 RGPD3A6NKT7 1758 aaPredicted RBP9.47□□□□□ -0.89
HHLA3-201ENST00000359875 AKAP12Q02952 1782 aa9.47□□□□□ -0.89
HHLA3-201ENST00000359875 RGPD4Q7Z3J3 1758 aa9.47□□□□□ -0.89
HHLA3-201ENST00000359875 LRRC37A3O60309 1634 aa9.47□□□□□ -0.89
HHLA3-201ENST00000359875 PLSCR1O15162 318 aa9.47□□□□□ -0.89
HHLA3-201ENST00000359875 HRO43593 1189 aa9.47□□□□□ -0.89
HHLA3-201ENST00000359875 NEUROD1Q13562 356 aa9.47□□□□□ -0.89
HHLA3-201ENST00000359875 PAXIP1Q6ZW49 1069 aaPredicted RBP9.47□□□□□ -0.89
HHLA3-201ENST00000359875 PUS7Q96PZ0 661 aaKnown RBP9.47□□□□□ -0.89
HHLA3-201ENST00000359875 USP31Q70CQ4 1352 aa9.47□□□□□ -0.89
HHLA3-201ENST00000359875 COL18A1P39060 1754 aa9.47□□□□□ -0.89
HHLA3-201ENST00000359875 PEAK1Q9H792 1746 aa9.46□□□□□ -0.89
HHLA3-201ENST00000359875 PHF14O94880 888 aa9.46□□□□□ -0.9
HHLA3-201ENST00000359875 CFAP44Q96MT7 982 aa9.46□□□□□ -0.9
HHLA3-201ENST00000359875 CARD10Q9BWT7 1032 aa9.46□□□□□ -0.9
HHLA3-201ENST00000359875 CARD11Q9BXL7 1154 aa9.46□□□□□ -0.9
HHLA3-201ENST00000359875 HCSTQ9UBK5 93 aa9.46□□□□□ -0.9
HHLA3-201ENST00000359875 TONSLQ96HA7 1378 aa9.46□□□□□ -0.9
HHLA3-201ENST00000359875 NFAT5O94916 1531 aa9.46□□□□□ -0.9
HHLA3-201ENST00000359875 USP54Q70EL1 1684 aa9.45□□□□□ -0.9
HHLA3-201ENST00000359875 NUP188Q5SRE5 1749 aa9.45□□□□□ -0.9
HHLA3-201ENST00000359875 MON2Q7Z3U7 1717 aa9.45□□□□□ -0.9
HHLA3-201ENST00000359875 ZBTB7CA1YPR0 619 aa9.45□□□□□ -0.9
HHLA3-201ENST00000359875 TRIM26Q12899 539 aaPredicted RBP9.45□□□□□ -0.9
HHLA3-201ENST00000359875 WDR70Q9NW82 654 aa9.45□□□□□ -0.9
HHLA3-201ENST00000359875 NINLQ9Y2I6 1382 aa9.45□□□□□ -0.9
HHLA3-201ENST00000359875 CSB-PGBD3P0DP91 1061 aa9.44□□□□□ -0.9
HHLA3-201ENST00000359875 TYW1BQ6NUM6 668 aa9.44□□□□□ -0.9
HHLA3-201ENST00000359875 HDGFL2Q7Z4V5 671 aaPredicted RBP9.44□□□□□ -0.9
HHLA3-201ENST00000359875 EPAS1Q99814 870 aa9.44□□□□□ -0.9
HHLA3-201ENST00000359875 TERF2IPQ9NYB0 399 aa9.44□□□□□ -0.9
HHLA3-201ENST00000359875 VPS9D1Q9Y2B5 631 aa9.44□□□□□ -0.9
HHLA3-201ENST00000359875 WNK3Q9BYP7 1800 aa9.44□□□□□ -0.9
HHLA3-201ENST00000359875 CD163L1Q9NR16 1453 aa9.43□□□□□ -0.9
HHLA3-201ENST00000359875 TNS2Q63HR2 1409 aa9.43□□□□□ -0.9
HHLA3-201ENST00000359875 EDC4Q6P2E9 1401 aaKnown RBP9.43□□□□□ -0.9
HHLA3-201ENST00000359875 SPDYE16A6NNV3 312 aaPredicted RBP9.42□□□□□ -0.9
HHLA3-201ENST00000359875 EXOC5O00471 708 aa9.42□□□□□ -0.9
HHLA3-201ENST00000359875 ADAM33Q9BZ11 813 aa9.42□□□□□ -0.9
HHLA3-201ENST00000359875 DPYSL4O14531 572 aa9.41□□□□□ -0.9
HHLA3-201ENST00000359875 MARCH10Q8NA82 808 aaPredicted RBP9.41□□□□□ -0.9
HHLA3-201ENST00000359875 SPON1Q9HCB6 807 aa9.41□□□□□ -0.9
HHLA3-201ENST00000359875 PCDHGA10Q9Y5H3 936 aa9.41□□□□□ -0.9
HHLA3-201ENST00000359875 A0A1W2PP64 1363 aa9.4□□□□□ -0.9
HHLA3-201ENST00000359875 PPP1R3GB7ZBB8 358 aa9.4□□□□□ -0.9
HHLA3-201ENST00000359875 KCNQ2O43526 872 aa9.4□□□□□ -0.9
HHLA3-201ENST00000359875 E2F4Q16254 413 aa9.4□□□□□ -0.9
HHLA3-201ENST00000359875 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.4□□□□□ -0.9
HHLA3-201ENST00000359875 TMC1Q8TDI8 760 aa9.4□□□□□ -0.9
HHLA3-201ENST00000359875 ZBED2Q9BTP6 218 aa9.4□□□□□ -0.9
HHLA3-201ENST00000359875 NBPF3Q9H094 633 aa9.4□□□□□ -0.9
HHLA3-201ENST00000359875 SBF2Q86WG5 1849 aa9.4□□□□□ -0.91
HHLA3-201ENST00000359875 IL2RBP14784 551 aa9.39□□□□□ -0.91
HHLA3-201ENST00000359875 NME9Q86XW9 330 aa9.39□□□□□ -0.91
HHLA3-201ENST00000359875 ARIH1Q9Y4X5 557 aaPredicted RBP9.39□□□□□ -0.91
HHLA3-201ENST00000359875 SLC12A5Q9H2X9 1139 aa9.38□□□□□ -0.91
HHLA3-201ENST00000359875 NLRP2Q9NX02 1062 aa9.38□□□□□ -0.91
HHLA3-201ENST00000359875 PPP1R1BQ9UD71 204 aaPredicted RBP9.38□□□□□ -0.91
HHLA3-201ENST00000359875 NHSQ6T4R5 1651 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms