RNA–Protein interactions for RNA: ENST00000359492.6

APOA1-202, Transcript of apolipoprotein A1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene APOA1, Length 932 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOA1-202ENST00000359492 IFNL2Q8IZJ0 200 aa18.99■□□□□ 0.63
APOA1-202ENST00000359492 TMOD3Q9NYL9 352 aa18.99■□□□□ 0.63
APOA1-202ENST00000359492 KIF13BQ9NQT8 1826 aa18.99■□□□□ 0.63
APOA1-202ENST00000359492 COL5A3P25940 1745 aaPredicted RBP18.97■□□□□ 0.63
APOA1-202ENST00000359492 CICQ96RK0 1608 aaPredicted RBP18.96■□□□□ 0.63
APOA1-202ENST00000359492 MYH14Q7Z406 1995 aaKnown RBP18.96■□□□□ 0.63
APOA1-202ENST00000359492 KDM6AO15550 1401 aaPredicted RBP18.96■□□□□ 0.63
APOA1-202ENST00000359492 CLSPNQ9HAW4 1339 aa18.96■□□□□ 0.63
APOA1-202ENST00000359492 GNPATO15228 680 aa18.95■□□□□ 0.62
APOA1-202ENST00000359492 ATP6V1AP38606 617 aa18.95■□□□□ 0.62
APOA1-202ENST00000359492 PXDNLA1KZ92 1463 aa18.93■□□□□ 0.62
APOA1-202ENST00000359492 ERVV-2B6SEH9 535 aa18.93■□□□□ 0.62
APOA1-202ENST00000359492 TNNT2P45379 298 aaPredicted RBP18.93■□□□□ 0.62
APOA1-202ENST00000359492 WWC3Q9ULE0 1092 aa18.92■□□□□ 0.62
APOA1-202ENST00000359492 MMP10P09238 476 aa18.91■□□□□ 0.62
APOA1-202ENST00000359492 RC3H1Q5TC82 1133 aaKnown RBP18.91■□□□□ 0.62
APOA1-202ENST00000359492 PANK3Q9H999 370 aa18.91■□□□□ 0.62
APOA1-202ENST00000359492 N4BP2Q86UW6 1770 aaPredicted RBP18.91■□□□□ 0.62
APOA1-202ENST00000359492 HSPA5P11021 654 aaKnown RBP18.9■□□□□ 0.62
APOA1-202ENST00000359492 AEBP1Q8IUX7 1158 aa18.9■□□□□ 0.62
APOA1-202ENST00000359492 DCAF5Q96JK2 942 aa18.9■□□□□ 0.62
APOA1-202ENST00000359492 C4AP0C0L4 1744 aa18.9■□□□□ 0.62
APOA1-202ENST00000359492 BRCA1P38398 1863 aaKnown RBP18.9■□□□□ 0.62
APOA1-202ENST00000359492 C10orf71Q711Q0 1435 aa18.9■□□□□ 0.62
APOA1-202ENST00000359492 CNTNAP4Q9C0A0 1308 aa18.89■□□□□ 0.61
APOA1-202ENST00000359492 ARHGEF1Q92888 912 aaKnown RBP18.88■□□□□ 0.61
APOA1-202ENST00000359492 ADAMTS7Q9UKP4 1686 aa18.88■□□□□ 0.61
APOA1-202ENST00000359492 GYS1P13807 737 aa18.87■□□□□ 0.61
APOA1-202ENST00000359492 POLR3GLQ9BT43 218 aa18.87■□□□□ 0.61
APOA1-202ENST00000359492 GPBP1L1Q9HC44 474 aaPredicted RBP18.87■□□□□ 0.61
APOA1-202ENST00000359492 RTCBQ9Y3I0 505 aaKnown RBP18.87■□□□□ 0.61
APOA1-202ENST00000359492 TJP1Q07157 1748 aa18.86■□□□□ 0.61
APOA1-202ENST00000359492 KIF3CO14782 793 aa18.86■□□□□ 0.61
APOA1-202ENST00000359492 RPS6KA4O75676 772 aa18.86■□□□□ 0.61
APOA1-202ENST00000359492 HSP90AB1P08238 724 aaKnown RBP18.86■□□□□ 0.61
APOA1-202ENST00000359492 ADRA2BP18089 450 aa18.86■□□□□ 0.61
APOA1-202ENST00000359492 PLEKHO1Q53GL0 409 aaPredicted RBP18.86■□□□□ 0.61
APOA1-202ENST00000359492 TRAPPC3LQ5T215 181 aa18.86■□□□□ 0.61
APOA1-202ENST00000359492 ZNF530Q6P9A1 599 aaPredicted RBP18.86■□□□□ 0.61
APOA1-202ENST00000359492 EIF4G2P78344 907 aaKnown RBP eCLIP18.85■□□□□ 0.61
APOA1-202ENST00000359492 NLGN1Q8N2Q7 840 aa18.85■□□□□ 0.61
APOA1-202ENST00000359492 ZNF526Q8TF50 670 aaPredicted RBP18.85■□□□□ 0.61
APOA1-202ENST00000359492 RBM42Q9BTD8 480 aaKnown RBP18.85■□□□□ 0.61
APOA1-202ENST00000359492 SCN11AQ9UI33 1791 aa18.85■□□□□ 0.61
APOA1-202ENST00000359492 KCNA3P22001 575 aa18.84■□□□□ 0.61
APOA1-202ENST00000359492 TGFB2P61812 414 aa18.84■□□□□ 0.61
APOA1-202ENST00000359492 AMOTQ4VCS5 1084 aa18.84■□□□□ 0.61
APOA1-202ENST00000359492 A0A0G2JLW4 131 aa18.83■□□□□ 0.6
APOA1-202ENST00000359492 IL13P35225 146 aa18.83■□□□□ 0.6
APOA1-202ENST00000359492 HSPA6P17066 643 aa18.82■□□□□ 0.6
APOA1-202ENST00000359492 CABP4P57796 275 aa18.82■□□□□ 0.6
APOA1-202ENST00000359492 NFATC2IPQ8NCF5 419 aa18.82■□□□□ 0.6
APOA1-202ENST00000359492 MTHFSP49914 203 aa18.81■□□□□ 0.6
APOA1-202ENST00000359492 ARFGEF1Q9Y6D6 1849 aa18.8■□□□□ 0.6
APOA1-202ENST00000359492 DPEP1P16444 411 aa18.8■□□□□ 0.6
APOA1-202ENST00000359492 CRKLP46109 303 aaKnown RBP18.8■□□□□ 0.6
APOA1-202ENST00000359492 AMER1Q5JTC6 1135 aaPredicted RBP18.8■□□□□ 0.6
APOA1-202ENST00000359492 SULT6B1Q6IMI4 303 aa18.8■□□□□ 0.6
APOA1-202ENST00000359492 MORC1Q86VD1 984 aa18.8■□□□□ 0.6
APOA1-202ENST00000359492 PTCD1O75127 700 aaKnown RBP18.79■□□□□ 0.6
APOA1-202ENST00000359492 DDR1Q08345 913 aa18.79■□□□□ 0.6
APOA1-202ENST00000359492 INTS5Q6P9B9 1019 aaKnown RBP18.79■□□□□ 0.6
APOA1-202ENST00000359492 CCER1Q8TC90 406 aaPredicted RBP18.79■□□□□ 0.6
APOA1-202ENST00000359492 SRP68Q9UHB9 627 aaKnown RBP18.79■□□□□ 0.6
APOA1-202ENST00000359492 MRC1P22897 1456 aa18.78■□□□□ 0.6
APOA1-202ENST00000359492 USP42Q9H9J4 1324 aaKnown RBP18.78■□□□□ 0.6
APOA1-202ENST00000359492 RFC4P35249 363 aa18.78■□□□□ 0.6
APOA1-202ENST00000359492 BCS1LQ9Y276 419 aa18.78■□□□□ 0.6
APOA1-202ENST00000359492 VIRMAQ69YN4 1812 aaKnown RBP18.77■□□□□ 0.6
APOA1-202ENST00000359492 FKBP8Q14318 412 aa18.77■□□□□ 0.6
APOA1-202ENST00000359492 CCDC87Q9NVE4 849 aa18.77■□□□□ 0.6
APOA1-202ENST00000359492 C1orf141Q5JVX7 400 aa18.76■□□□□ 0.59
APOA1-202ENST00000359492 LGR6Q9HBX8 967 aa18.76■□□□□ 0.59
APOA1-202ENST00000359492 KCPQ6ZWJ8 1503 aa18.75■□□□□ 0.59
APOA1-202ENST00000359492 TM4SF1P30408 202 aa18.75■□□□□ 0.59
APOA1-202ENST00000359492 PARP3Q9Y6F1 533 aa18.75■□□□□ 0.59
APOA1-202ENST00000359492 IFFO2Q5TF58 517 aa18.74■□□□□ 0.59
APOA1-202ENST00000359492 PER1O15534 1290 aaPredicted RBP18.73■□□□□ 0.59
APOA1-202ENST00000359492 AKAP4Q5JQC9 854 aa18.73■□□□□ 0.59
APOA1-202ENST00000359492 ARHGAP27Q6ZUM4 889 aa18.73■□□□□ 0.59
APOA1-202ENST00000359492 DNAJC10Q8IXB1 793 aa18.73■□□□□ 0.59
APOA1-202ENST00000359492 SLC52A2Q9HAB3 445 aa18.73■□□□□ 0.59
APOA1-202ENST00000359492 KNSTRNQ9Y448 316 aa18.73■□□□□ 0.59
APOA1-202ENST00000359492 NRXN2Q9P2S2 1712 aa18.73■□□□□ 0.59
APOA1-202ENST00000359492 SBF1O95248 1867 aa18.72■□□□□ 0.59
APOA1-202ENST00000359492 POLRMTO00411 1230 aaKnown RBP18.72■□□□□ 0.59
APOA1-202ENST00000359492 FCHSD2O94868 740 aa18.72■□□□□ 0.59
APOA1-202ENST00000359492 NMRK2Q9NPI5 230 aa18.72■□□□□ 0.59
APOA1-202ENST00000359492 AFDNP55196 1824 aaKnown RBP18.72■□□□□ 0.59
APOA1-202ENST00000359492 SOS1Q07889 1333 aaPredicted RBP18.72■□□□□ 0.59
APOA1-202ENST00000359492 UBR2Q8IWV8 1755 aa18.71■□□□□ 0.59
APOA1-202ENST00000359492 RNMTO43148 476 aaKnown RBP18.71■□□□□ 0.59
APOA1-202ENST00000359492 CYP19A1P11511 503 aaPredicted RBP18.71■□□□□ 0.59
APOA1-202ENST00000359492 KIF7Q2M1P5 1343 aa18.71■□□□□ 0.59
APOA1-202ENST00000359492 SLC39A6Q13433 755 aa18.7■□□□□ 0.58
APOA1-202ENST00000359492 DNAJC5GQ8N7S2 189 aa18.7■□□□□ 0.58
APOA1-202ENST00000359492 PCNTO95613 3336 aa18.7■□□□□ 0.58
APOA1-202ENST00000359492 TOMM70O94826 608 aa18.69■□□□□ 0.58
APOA1-202ENST00000359492 CHRNA5P30532 468 aa18.69■□□□□ 0.58
APOA1-202ENST00000359492 C9orf131Q5VYM1 1079 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms