RNA–Protein interactions for RNA: ENST00000358966.6

GGPS1-202, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene GGPS1, Length 2,740 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-202ENST00000358966 AKAP4Q5JQC9 854 aa15.97■□□□□ 0.15
GGPS1-202ENST00000358966 TEFQ10587 303 aa15.96■□□□□ 0.15
GGPS1-202ENST00000358966 RAPGEF4Q8WZA2 1011 aa15.96■□□□□ 0.15
GGPS1-202ENST00000358966 FGD1P98174 961 aa15.96■□□□□ 0.15
GGPS1-202ENST00000358966 BACH2Q9BYV9 841 aa15.96■□□□□ 0.15
GGPS1-202ENST00000358966 STRN4Q9NRL3 753 aa15.96■□□□□ 0.15
GGPS1-202ENST00000358966 USP35Q9P2H5 1018 aa15.96■□□□□ 0.15
GGPS1-202ENST00000358966 VIRMAQ69YN4 1812 aaKnown RBP15.96■□□□□ 0.14
GGPS1-202ENST00000358966 RNMTO43148 476 aaKnown RBP15.96■□□□□ 0.14
GGPS1-202ENST00000358966 NCAPD2Q15021 1401 aa15.95■□□□□ 0.14
GGPS1-202ENST00000358966 BTBD11A6QL63 1104 aa15.95■□□□□ 0.14
GGPS1-202ENST00000358966 RBM10P98175 930 aaKnown RBP15.95■□□□□ 0.14
GGPS1-202ENST00000358966 ARHGAP45Q92619 1136 aa15.95■□□□□ 0.14
GGPS1-202ENST00000358966 RWDD1Q9H446 243 aaPredicted RBP15.95■□□□□ 0.14
GGPS1-202ENST00000358966 SLC39A6Q13433 755 aa15.94■□□□□ 0.14
GGPS1-202ENST00000358966 FAM208AQ9UK61 1670 aaKnown RBP15.94■□□□□ 0.14
GGPS1-202ENST00000358966 CAMTA1Q9Y6Y1 1673 aa15.94■□□□□ 0.14
GGPS1-202ENST00000358966 ANP32AP39687 249 aaKnown RBP15.94■□□□□ 0.14
GGPS1-202ENST00000358966 AMOTQ4VCS5 1084 aa15.94■□□□□ 0.14
GGPS1-202ENST00000358966 API5Q9BZZ5 524 aaKnown RBP15.94■□□□□ 0.14
GGPS1-202ENST00000358966 PHAXQ9H814 394 aaKnown RBP15.94■□□□□ 0.14
GGPS1-202ENST00000358966 SIRT2Q8IXJ6 389 aa15.93■□□□□ 0.14
GGPS1-202ENST00000358966 LMO7Q8WWI1 1683 aa15.93■□□□□ 0.14
GGPS1-202ENST00000358966 EIF4A1P60842 406 aaKnown RBP15.93■□□□□ 0.14
GGPS1-202ENST00000358966 AAMPQ13685 434 aa15.93■□□□□ 0.14
GGPS1-202ENST00000358966 HDGFL1Q5TGJ6 251 aa15.93■□□□□ 0.14
GGPS1-202ENST00000358966 MEIS3Q99687 375 aa15.93■□□□□ 0.14
GGPS1-202ENST00000358966 FKBP5Q13451 457 aaPredicted RBP15.92■□□□□ 0.14
GGPS1-202ENST00000358966 TOM1L2Q6ZVM7 507 aa15.92■□□□□ 0.14
GGPS1-202ENST00000358966 C8orf34Q49A92 452 aa15.92■□□□□ 0.14
GGPS1-202ENST00000358966 STK31Q9BXU1 1019 aa15.92■□□□□ 0.14
GGPS1-202ENST00000358966 CYP27B1O15528 508 aa15.91■□□□□ 0.14
GGPS1-202ENST00000358966 TATP17735 454 aaPredicted RBP15.91■□□□□ 0.14
GGPS1-202ENST00000358966 FLIIQ13045 1269 aa15.91■□□□□ 0.14
GGPS1-202ENST00000358966 KDM6AO15550 1401 aaPredicted RBP15.9■□□□□ 0.14
GGPS1-202ENST00000358966 LARP1Q6PKG0 1096 aaKnown RBP15.9■□□□□ 0.14
GGPS1-202ENST00000358966 CHPF2Q9P2E5 772 aa15.9■□□□□ 0.14
GGPS1-202ENST00000358966 CPDO75976 1380 aa15.9■□□□□ 0.14
GGPS1-202ENST00000358966 NFATC2IPQ8NCF5 419 aa15.9■□□□□ 0.14
GGPS1-202ENST00000358966 PHKG2P15735 406 aa15.89■□□□□ 0.13
GGPS1-202ENST00000358966 CCDC30Q5VVM6 783 aa15.89■□□□□ 0.13
GGPS1-202ENST00000358966 LNPKQ9C0E8 428 aa15.89■□□□□ 0.13
GGPS1-202ENST00000358966 HDAC1Q13547 482 aaPredicted RBP15.89■□□□□ 0.13
GGPS1-202ENST00000358966 PROSER3Q2NL68 480 aa15.88■□□□□ 0.13
GGPS1-202ENST00000358966 ABCA3Q99758 1704 aa15.88■□□□□ 0.13
GGPS1-202ENST00000358966 INTS3Q68E01 1043 aaKnown RBP15.88■□□□□ 0.13
GGPS1-202ENST00000358966 KDM3BQ7LBC6 1761 aa15.88■□□□□ 0.13
GGPS1-202ENST00000358966 PIP4K2AP48426 406 aaPredicted RBP15.88■□□□□ 0.13
GGPS1-202ENST00000358966 PTPRCP08575 1304 aa15.88■□□□□ 0.13
GGPS1-202ENST00000358966 COL5A2P05997 1499 aaPredicted RBP15.87■□□□□ 0.13
GGPS1-202ENST00000358966 NHSL1Q5SYE7 1610 aa15.87■□□□□ 0.13
GGPS1-202ENST00000358966 ROBO1Q9Y6N7 1651 aa15.87■□□□□ 0.13
GGPS1-202ENST00000358966 APBB1O00213 710 aa15.87■□□□□ 0.13
GGPS1-202ENST00000358966 WDR17Q8IZU2 1322 aa15.87■□□□□ 0.13
GGPS1-202ENST00000358966 PIP4K2BP78356 416 aa15.87■□□□□ 0.13
GGPS1-202ENST00000358966 FAM161AQ3B820 660 aa15.86■□□□□ 0.13
GGPS1-202ENST00000358966 SEC24BO95487 1268 aa15.86■□□□□ 0.13
GGPS1-202ENST00000358966 SMC5Q8IY18 1101 aa15.86■□□□□ 0.13
GGPS1-202ENST00000358966 SPG7Q9UQ90 795 aa15.86■□□□□ 0.13
GGPS1-202ENST00000358966 EVA1CP58658 441 aa15.85■□□□□ 0.13
GGPS1-202ENST00000358966 DDX54Q8TDD1 881 aaKnown RBP15.85■□□□□ 0.13
GGPS1-202ENST00000358966 BTG4Q9NY30 223 aa15.85■□□□□ 0.13
GGPS1-202ENST00000358966 PDIA4P13667 645 aaKnown RBP15.84■□□□□ 0.13
GGPS1-202ENST00000358966 ANKRD45Q5TZF3 282 aa15.84■□□□□ 0.13
GGPS1-202ENST00000358966 IFNL2Q8IZJ0 200 aa15.84■□□□□ 0.13
GGPS1-202ENST00000358966 GIGYF1O75420 1035 aaPredicted RBP15.84■□□□□ 0.13
GGPS1-202ENST00000358966 SLC52A2Q9HAB3 445 aa15.84■□□□□ 0.13
GGPS1-202ENST00000358966 KAT6BQ8WYB5 2073 aa15.84■□□□□ 0.13
GGPS1-202ENST00000358966 ATP10DQ9P241 1426 aa15.83■□□□□ 0.13
GGPS1-202ENST00000358966 FAM43AQ8N2R8 423 aa15.83■□□□□ 0.12
GGPS1-202ENST00000358966 ADAMTS2O95450 1211 aa15.82■□□□□ 0.12
GGPS1-202ENST00000358966 ZNF790Q6PG37 636 aa15.82■□□□□ 0.12
GGPS1-202ENST00000358966 BABAM1Q9NWV8 329 aa15.82■□□□□ 0.12
GGPS1-202ENST00000358966 LTBP4Q8N2S1 1624 aa15.82■□□□□ 0.12
GGPS1-202ENST00000358966 SIPA1L3O60292 1781 aaPredicted RBP15.82■□□□□ 0.12
GGPS1-202ENST00000358966 SCN11AQ9UI33 1791 aa15.82■□□□□ 0.12
GGPS1-202ENST00000358966 CEP85Q6P2H3 762 aa15.82■□□□□ 0.12
GGPS1-202ENST00000358966 ZNF496Q96IT1 587 aaPredicted RBP15.82■□□□□ 0.12
GGPS1-202ENST00000358966 PI4KAP2A4QPH2 592 aa15.81■□□□□ 0.12
GGPS1-202ENST00000358966 PI4KAP1Q8N8J0 262 aa15.81■□□□□ 0.12
GGPS1-202ENST00000358966 AIMP1Q12904 312 aaKnown RBP15.81■□□□□ 0.12
GGPS1-202ENST00000358966 GSE1Q14687 1217 aa15.81■□□□□ 0.12
GGPS1-202ENST00000358966 BCL11BQ9C0K0 894 aaPredicted RBP15.81■□□□□ 0.12
GGPS1-202ENST00000358966 OVOS2A0A0G2JMS6 1433 aa15.81■□□□□ 0.12
GGPS1-202ENST00000358966 NUCB1Q02818 461 aa15.81■□□□□ 0.12
GGPS1-202ENST00000358966 HSP90AA2PQ14568 343 aaPredicted RBP15.81■□□□□ 0.12
GGPS1-202ENST00000358966 MYL6BP14649 208 aa15.8■□□□□ 0.12
GGPS1-202ENST00000358966 CHD1LQ86WJ1 897 aa15.8■□□□□ 0.12
GGPS1-202ENST00000358966 ZCRB1Q8TBF4 217 aaKnown RBP15.8■□□□□ 0.12
GGPS1-202ENST00000358966 SMARCA5O60264 1052 aaPredicted RBP15.8■□□□□ 0.12
GGPS1-202ENST00000358966 NUTM2BA6NNL0 878 aaPredicted RBP15.79■□□□□ 0.12
GGPS1-202ENST00000358966 NUTM2EB1AL46 878 aaPredicted RBP15.79■□□□□ 0.12
GGPS1-202ENST00000358966 NUTM2AQ8IVF1 878 aaPredicted RBP15.79■□□□□ 0.12
GGPS1-202ENST00000358966 C16orf71Q8IYS4 520 aaPredicted RBP15.79■□□□□ 0.12
GGPS1-202ENST00000358966 IL2RBP14784 551 aa15.79■□□□□ 0.12
GGPS1-202ENST00000358966 CABP4P57796 275 aa15.79■□□□□ 0.12
GGPS1-202ENST00000358966 DCAF5Q96JK2 942 aa15.79■□□□□ 0.12
GGPS1-202ENST00000358966 ADAMTS7Q9UKP4 1686 aa15.78■□□□□ 0.12
GGPS1-202ENST00000358966 PKD1L3Q7Z443 1732 aa15.78■□□□□ 0.12
GGPS1-202ENST00000358966 CCT4P50991 539 aaKnown RBP15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms