RNA–Protein interactions for RNA: ENST00000358781.6

FAM3D-201, Transcript of family with sequence similarity 3 member D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM3D, Length 1,319 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3D-201ENST00000358781 LGR6Q9HBX8 967 aa22.76■■□□□ 1.23
FAM3D-201ENST00000358781 NFATC2IPQ8NCF5 419 aa22.75■■□□□ 1.23
FAM3D-201ENST00000358781 PHACTR3Q96KR7 559 aa22.75■■□□□ 1.23
FAM3D-201ENST00000358781 SPON1Q9HCB6 807 aa22.75■■□□□ 1.23
FAM3D-201ENST00000358781 TFCP2L1Q9NZI6 479 aa22.75■■□□□ 1.23
FAM3D-201ENST00000358781 MYBBP1AQ9BQG0 1328 aaKnown RBP22.74■■□□□ 1.23
FAM3D-201ENST00000358781 MRC1P22897 1456 aa22.74■■□□□ 1.23
FAM3D-201ENST00000358781 ZNF316A6NFI3 1004 aaPredicted RBP22.74■■□□□ 1.23
FAM3D-201ENST00000358781 SLC52A2Q9HAB3 445 aa22.73■■□□□ 1.23
FAM3D-201ENST00000358781 MAP3K5Q99683 1374 aa22.73■■□□□ 1.23
FAM3D-201ENST00000358781 PNPLA7Q6ZV29 1317 aa22.72■■□□□ 1.23
FAM3D-201ENST00000358781 ZBTB7AO95365 584 aa22.72■■□□□ 1.23
FAM3D-201ENST00000358781 C4BP0C0L5 1744 aa22.72■■□□□ 1.23
FAM3D-201ENST00000358781 GNAT3A8MTJ3 354 aa22.71■■□□□ 1.23
FAM3D-201ENST00000358781 ZNF831Q5JPB2 1677 aa22.71■■□□□ 1.23
FAM3D-201ENST00000358781 ATP6V1AP38606 617 aa22.7■■□□□ 1.22
FAM3D-201ENST00000358781 ITPK1Q13572 414 aa22.7■■□□□ 1.22
FAM3D-201ENST00000358781 LINC00116Q8NCU8 138 aa22.69■■□□□ 1.22
FAM3D-201ENST00000358781 RBM42Q9BTD8 480 aaKnown RBP22.69■■□□□ 1.22
FAM3D-201ENST00000358781 MTFR1LQ9H019 292 aa22.69■■□□□ 1.22
FAM3D-201ENST00000358781 PRKRIP1Q9H875 184 aaPredicted RBP22.69■■□□□ 1.22
FAM3D-201ENST00000358781 SLC4A9Q96Q91 983 aa22.68■■□□□ 1.22
FAM3D-201ENST00000358781 ATF5Q9Y2D1 282 aaPredicted RBP22.68■■□□□ 1.22
FAM3D-201ENST00000358781 IL17REQ8NFR9 667 aa22.67■■□□□ 1.22
FAM3D-201ENST00000358781 AK7Q96M32 723 aa22.67■■□□□ 1.22
FAM3D-201ENST00000358781 PTCD1O75127 700 aaKnown RBP22.66■■□□□ 1.22
FAM3D-201ENST00000358781 SLC16A10Q8TF71 515 aa22.66■■□□□ 1.22
FAM3D-201ENST00000358781 UBR3Q6ZT12 1888 aa22.65■■□□□ 1.22
FAM3D-201ENST00000358781 PTGER2P43116 358 aa22.65■■□□□ 1.22
FAM3D-201ENST00000358781 COL23A1Q86Y22 540 aaPredicted RBP22.64■■□□□ 1.22
FAM3D-201ENST00000358781 PLEKHF1Q96S99 279 aa22.64■■□□□ 1.22
FAM3D-201ENST00000358781 COL5A3P25940 1745 aaPredicted RBP22.64■■□□□ 1.21
FAM3D-201ENST00000358781 CEMIPQ8WUJ3 1361 aa22.64■■□□□ 1.21
FAM3D-201ENST00000358781 FLAD1Q8NFF5 587 aa22.63■■□□□ 1.21
FAM3D-201ENST00000358781 PPP1R1BQ9UD71 204 aaPredicted RBP22.63■■□□□ 1.21
FAM3D-201ENST00000358781 SIPA1L3O60292 1781 aaPredicted RBP22.63■■□□□ 1.21
FAM3D-201ENST00000358781 NEFMP07197 916 aa22.62■■□□□ 1.21
FAM3D-201ENST00000358781 TEFQ10587 303 aa22.62■■□□□ 1.21
FAM3D-201ENST00000358781 SLC39A6Q13433 755 aa22.62■■□□□ 1.21
FAM3D-201ENST00000358781 SGIP1Q9BQI5 828 aa22.62■■□□□ 1.21
FAM3D-201ENST00000358781 PNNQ9H307 717 aaKnown RBP22.62■■□□□ 1.21
FAM3D-201ENST00000358781 CICQ96RK0 1608 aaPredicted RBP22.62■■□□□ 1.21
FAM3D-201ENST00000358781 MSH5O43196 834 aa22.61■■□□□ 1.21
FAM3D-201ENST00000358781 AMIGO3Q86WK7 504 aa22.61■■□□□ 1.21
FAM3D-201ENST00000358781 COL24A1Q17RW2 1714 aa22.61■■□□□ 1.21
FAM3D-201ENST00000358781 RTF1Q92541 710 aaKnown RBP22.6■■□□□ 1.21
FAM3D-201ENST00000358781 TJP1Q07157 1748 aa22.6■■□□□ 1.21
FAM3D-201ENST00000358781 KCPQ6ZWJ8 1503 aa22.6■■□□□ 1.21
FAM3D-201ENST00000358781 UBR2Q8IWV8 1755 aa22.6■■□□□ 1.21
FAM3D-201ENST00000358781 GNPATO15228 680 aa22.59■■□□□ 1.21
FAM3D-201ENST00000358781 HTATSF1O43719 755 aaKnown RBP22.59■■□□□ 1.21
FAM3D-201ENST00000358781 SSFA2P28290 1259 aa22.59■■□□□ 1.21
FAM3D-201ENST00000358781 RC3H1Q5TC82 1133 aaKnown RBP22.59■■□□□ 1.21
FAM3D-201ENST00000358781 CNTNAP4Q9C0A0 1308 aa22.59■■□□□ 1.21
FAM3D-201ENST00000358781 DLG5Q8TDM6 1919 aa22.59■■□□□ 1.21
FAM3D-201ENST00000358781 MYH14Q7Z406 1995 aaKnown RBP22.59■■□□□ 1.21
FAM3D-201ENST00000358781 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.58■■□□□ 1.21
FAM3D-201ENST00000358781 PHF14O94880 888 aa22.58■■□□□ 1.21
FAM3D-201ENST00000358781 SMIM5Q71RC9 77 aa22.57■■□□□ 1.2
FAM3D-201ENST00000358781 MCM10Q7L590 875 aa22.57■■□□□ 1.2
FAM3D-201ENST00000358781 MAPK8IP3Q9UPT6 1336 aa22.57■■□□□ 1.2
FAM3D-201ENST00000358781 NFE2L2Q16236 605 aa22.57■■□□□ 1.2
FAM3D-201ENST00000358781 TTC5Q8N0Z6 440 aa22.57■■□□□ 1.2
FAM3D-201ENST00000358781 DCTN1Q14203 1278 aa22.56■■□□□ 1.2
FAM3D-201ENST00000358781 WDR43Q15061 677 aaKnown RBP eCLIP22.56■■□□□ 1.2
FAM3D-201ENST00000358781 ZNF790Q6PG37 636 aa22.56■■□□□ 1.2
FAM3D-201ENST00000358781 CRKLP46109 303 aaKnown RBP22.55■■□□□ 1.2
FAM3D-201ENST00000358781 DNAJC10Q8IXB1 793 aa22.55■■□□□ 1.2
FAM3D-201ENST00000358781 VSIG10Q8N0Z9 540 aa22.55■■□□□ 1.2
FAM3D-201ENST00000358781 ARXQ96QS3 562 aa22.55■■□□□ 1.2
FAM3D-201ENST00000358781 RTCBQ9Y3I0 505 aaKnown RBP22.55■■□□□ 1.2
FAM3D-201ENST00000358781 RPS6KA4O75676 772 aa22.54■■□□□ 1.2
FAM3D-201ENST00000358781 POLD1P28340 1107 aa22.54■■□□□ 1.2
FAM3D-201ENST00000358781 BTBD11A6QL63 1104 aa22.53■■□□□ 1.2
FAM3D-201ENST00000358781 MSL1Q68DK7 614 aa22.53■■□□□ 1.2
FAM3D-201ENST00000358781 ADRA2BP18089 450 aa22.52■■□□□ 1.2
FAM3D-201ENST00000358781 ZNF496Q96IT1 587 aaPredicted RBP22.52■■□□□ 1.2
FAM3D-201ENST00000358781 CYP19A1P11511 503 aaPredicted RBP22.51■■□□□ 1.19
FAM3D-201ENST00000358781 TRAPPC3LQ5T215 181 aa22.51■■□□□ 1.19
FAM3D-201ENST00000358781 INTS5Q6P9B9 1019 aaKnown RBP22.51■■□□□ 1.19
FAM3D-201ENST00000358781 ADAMTS8Q9UP79 889 aa22.51■■□□□ 1.19
FAM3D-201ENST00000358781 CCDC87Q9NVE4 849 aa22.5■■□□□ 1.19
FAM3D-201ENST00000358781 HEG1Q9ULI3 1381 aa22.49■■□□□ 1.19
FAM3D-201ENST00000358781 KCNQ3O43525 872 aa22.49■■□□□ 1.19
FAM3D-201ENST00000358781 TAF7Q15545 349 aaPredicted RBP22.49■■□□□ 1.19
FAM3D-201ENST00000358781 CCDC146Q8IYE0 955 aa22.49■■□□□ 1.19
FAM3D-201ENST00000358781 ARHGEF1Q92888 912 aaKnown RBP22.49■■□□□ 1.19
FAM3D-201ENST00000358781 FMNL2Q96PY5 1086 aa22.49■■□□□ 1.19
FAM3D-201ENST00000358781 FHDC1Q9C0D6 1143 aaPredicted RBP22.49■■□□□ 1.19
FAM3D-201ENST00000358781 RUNDC1Q96C34 613 aa22.48■■□□□ 1.19
FAM3D-201ENST00000358781 ANP32CO43423 234 aa22.47■■□□□ 1.19
FAM3D-201ENST00000358781 TMPOP42166 694 aaKnown RBP22.47■■□□□ 1.19
FAM3D-201ENST00000358781 RIPK4P57078 832 aa22.47■■□□□ 1.19
FAM3D-201ENST00000358781 C4AP0C0L4 1744 aa22.47■■□□□ 1.19
FAM3D-201ENST00000358781 STARD3NLO95772 234 aa22.46■■□□□ 1.19
FAM3D-201ENST00000358781 RFC4P35249 363 aa22.46■■□□□ 1.19
FAM3D-201ENST00000358781 SYT17Q9BSW7 474 aa22.46■■□□□ 1.19
FAM3D-201ENST00000358781 THUMPD2Q9BTF0 503 aaKnown RBP22.46■■□□□ 1.19
FAM3D-201ENST00000358781 TEX13AQ9BXU3 409 aaPredicted RBP22.46■■□□□ 1.19
FAM3D-201ENST00000358781 SOS1Q07889 1333 aaPredicted RBP22.45■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms