RNA–Protein interactions for RNA: ENST00000358392.6

COL11A1-202, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL11A1, Length 7,327 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-202ENST00000358392 MAATS1Q7Z4T9 603 aa13.02□□□□□ -0.33
COL11A1-202ENST00000358392 ZSWIM4Q9H7M6 989 aa13.02□□□□□ -0.33
COL11A1-202ENST00000358392 SMG6Q86US8 1419 aaKnown RBP13.02□□□□□ -0.33
COL11A1-202ENST00000358392 MINDY4BA8MYZ0 360 aa13.01□□□□□ -0.33
COL11A1-202ENST00000358392 PPM1EQ8WY54 764 aa13.01□□□□□ -0.33
COL11A1-202ENST00000358392 CCDC175P0C221 793 aa13.01□□□□□ -0.33
COL11A1-202ENST00000358392 CTNNA2P26232 953 aa13.01□□□□□ -0.33
COL11A1-202ENST00000358392 CCDC96Q2M329 555 aa13.01□□□□□ -0.33
COL11A1-202ENST00000358392 TSG101Q99816 390 aa13.01□□□□□ -0.33
COL11A1-202ENST00000358392 NUTM2BA6NNL0 878 aaPredicted RBP13.01□□□□□ -0.33
COL11A1-202ENST00000358392 NUTM2EB1AL46 878 aaPredicted RBP13.01□□□□□ -0.33
COL11A1-202ENST00000358392 PPP1R12BO60237 982 aaPredicted RBP13.01□□□□□ -0.33
COL11A1-202ENST00000358392 NUTM2AQ8IVF1 878 aaPredicted RBP13.01□□□□□ -0.33
COL11A1-202ENST00000358392 DDX23Q9BUQ8 820 aaKnown RBP13.01□□□□□ -0.33
COL11A1-202ENST00000358392 PPP6R1Q9UPN7 881 aa13.01□□□□□ -0.33
COL11A1-202ENST00000358392 TERF1P54274 439 aa13.01□□□□□ -0.33
COL11A1-202ENST00000358392 SKAP1Q86WV1 359 aa13.01□□□□□ -0.33
COL11A1-202ENST00000358392 ABCF2Q9UG63 623 aa13.01□□□□□ -0.33
COL11A1-202ENST00000358392 HOOK3Q86VS8 718 aa13.01□□□□□ -0.33
COL11A1-202ENST00000358392 DRC1Q96MC2 740 aa13.01□□□□□ -0.33
COL11A1-202ENST00000358392 RAPGEF2Q9Y4G8 1499 aa13.01□□□□□ -0.33
COL11A1-202ENST00000358392 MICALCLQ6ZW33 695 aa13□□□□□ -0.33
COL11A1-202ENST00000358392 SRCIN1Q9C0H9 1055 aa13□□□□□ -0.33
COL11A1-202ENST00000358392 SEC63Q9UGP8 760 aaKnown RBP13□□□□□ -0.33
COL11A1-202ENST00000358392 BRD4O60885 1362 aaPredicted RBP13□□□□□ -0.33
COL11A1-202ENST00000358392 BIN1O00499 593 aa13□□□□□ -0.33
COL11A1-202ENST00000358392 AIDAQ96BJ3 306 aa13□□□□□ -0.33
COL11A1-202ENST00000358392 ZSCAN31Q96LW9 406 aaPredicted RBP13□□□□□ -0.33
COL11A1-202ENST00000358392 USP25Q9UHP3 1055 aa13□□□□□ -0.33
COL11A1-202ENST00000358392 WASHC2AQ641Q2 1341 aa12.99□□□□□ -0.33
COL11A1-202ENST00000358392 APBB1IPQ7Z5R6 666 aaPredicted RBP12.99□□□□□ -0.33
COL11A1-202ENST00000358392 DCAF8L1A6NGE4 600 aa12.99□□□□□ -0.33
COL11A1-202ENST00000358392 TRIM21P19474 475 aaKnown RBP12.99□□□□□ -0.33
COL11A1-202ENST00000358392 PRPF40BQ6NWY9 871 aaKnown RBP12.99□□□□□ -0.33
COL11A1-202ENST00000358392 CALCOCO1Q9P1Z2 691 aa12.99□□□□□ -0.33
COL11A1-202ENST00000358392 MVPQ14764 893 aaKnown RBP12.99□□□□□ -0.33
COL11A1-202ENST00000358392 WASF1Q92558 559 aa12.99□□□□□ -0.33
COL11A1-202ENST00000358392 MMRN2Q9H8L6 949 aa12.99□□□□□ -0.33
COL11A1-202ENST00000358392 CCDC183Q5T5S1 534 aa12.99□□□□□ -0.33
COL11A1-202ENST00000358392 TMC6Q7Z403 805 aa12.99□□□□□ -0.33
COL11A1-202ENST00000358392 SMARCC1Q92922 1105 aaPredicted RBP12.99□□□□□ -0.33
COL11A1-202ENST00000358392 PAIP2Q9BPZ3 127 aaKnown RBP12.99□□□□□ -0.33
COL11A1-202ENST00000358392 MIS18AQ9NYP9 233 aa12.99□□□□□ -0.33
COL11A1-202ENST00000358392 TATP17735 454 aaPredicted RBP12.99□□□□□ -0.33
COL11A1-202ENST00000358392 SLC4A8Q2Y0W8 1093 aa12.99□□□□□ -0.33
COL11A1-202ENST00000358392 HOMER2Q9NSB8 354 aa12.99□□□□□ -0.33
COL11A1-202ENST00000358392 CCDC144CPQ8IYA2 1237 aa12.98□□□□□ -0.33
COL11A1-202ENST00000358392 CCDC160A6NGH7 325 aa12.98□□□□□ -0.33
COL11A1-202ENST00000358392 ANO10Q9NW15 660 aa12.98□□□□□ -0.33
COL11A1-202ENST00000358392 EXOC6BQ9Y2D4 811 aa12.98□□□□□ -0.33
COL11A1-202ENST00000358392 RNF216Q9NWF9 866 aaPredicted RBP12.98□□□□□ -0.33
COL11A1-202ENST00000358392 BTBD11A6QL63 1104 aa12.98□□□□□ -0.33
COL11A1-202ENST00000358392 PPFIA3O75145 1194 aa12.98□□□□□ -0.33
COL11A1-202ENST00000358392 GDPD2Q9HCC8 539 aa12.98□□□□□ -0.33
COL11A1-202ENST00000358392 MCM3P25205 808 aa12.97□□□□□ -0.33
COL11A1-202ENST00000358392 PAFAH1B1P43034 410 aa12.97□□□□□ -0.33
COL11A1-202ENST00000358392 TOM1L2Q6ZVM7 507 aa12.97□□□□□ -0.33
COL11A1-202ENST00000358392 JPH4Q96JJ6 628 aa12.97□□□□□ -0.33
COL11A1-202ENST00000358392 CTNNA3Q9UI47 895 aa12.97□□□□□ -0.33
COL11A1-202ENST00000358392 NOP2P46087 812 aaKnown RBP12.97□□□□□ -0.33
COL11A1-202ENST00000358392 ATF7IPQ6VMQ6 1270 aa12.97□□□□□ -0.33
COL11A1-202ENST00000358392 FERMT2Q96AC1 680 aa12.97□□□□□ -0.33
COL11A1-202ENST00000358392 GRIPAP1Q4V328 841 aa12.97□□□□□ -0.33
COL11A1-202ENST00000358392 PDE3AQ14432 1141 aa12.97□□□□□ -0.33
COL11A1-202ENST00000358392 POLR3DP05423 398 aaPredicted RBP12.96□□□□□ -0.33
COL11A1-202ENST00000358392 CCT2P78371 535 aaKnown RBP12.96□□□□□ -0.33
COL11A1-202ENST00000358392 GPRASP1Q5JY77 1395 aa12.96□□□□□ -0.33
COL11A1-202ENST00000358392 PUF60Q9UHX1 559 aaKnown RBP12.96□□□□□ -0.33
COL11A1-202ENST00000358392 USO1O60763 962 aaKnown RBP12.96□□□□□ -0.33
COL11A1-202ENST00000358392 MNAT1P51948 309 aa12.96□□□□□ -0.33
COL11A1-202ENST00000358392 VPS36Q86VN1 386 aa12.96□□□□□ -0.33
COL11A1-202ENST00000358392 RBM27Q9P2N5 1060 aaKnown RBP12.96□□□□□ -0.33
COL11A1-202ENST00000358392 SPATA24Q86W54 205 aa12.96□□□□□ -0.34
COL11A1-202ENST00000358392 JADE2Q9NQC1 790 aa12.96□□□□□ -0.34
COL11A1-202ENST00000358392 SSFA2P28290 1259 aa12.96□□□□□ -0.34
COL11A1-202ENST00000358392 CYB5RLQ6IPT4 315 aa12.96□□□□□ -0.34
COL11A1-202ENST00000358392 ZNF530Q6P9A1 599 aaPredicted RBP12.96□□□□□ -0.34
COL11A1-202ENST00000358392 AEBP2Q6ZN18 517 aaPredicted RBP12.96□□□□□ -0.34
COL11A1-202ENST00000358392 CNNM3Q8NE01 707 aa12.96□□□□□ -0.34
COL11A1-202ENST00000358392 BOLA2Q9H3K6 86 aa12.96□□□□□ -0.34
COL11A1-202ENST00000358392 TNIP1Q15025 636 aa12.95□□□□□ -0.34
COL11A1-202ENST00000358392 PANK2Q9BZ23 570 aa12.95□□□□□ -0.34
COL11A1-202ENST00000358392 PPP4R3AQ6IN85 833 aa12.95□□□□□ -0.34
COL11A1-202ENST00000358392 MKNK2Q9HBH9 465 aa12.95□□□□□ -0.34
COL11A1-202ENST00000358392 KRT32Q14532 448 aa12.95□□□□□ -0.34
COL11A1-202ENST00000358392 RRS1Q15050 365 aaKnown RBP12.95□□□□□ -0.34
COL11A1-202ENST00000358392 GIGYF2Q6Y7W6 1299 aaKnown RBP12.95□□□□□ -0.34
COL11A1-202ENST00000358392 CCDC150Q8NCX0 1101 aa12.95□□□□□ -0.34
COL11A1-202ENST00000358392 PRAM1Q96QH2 718 aa12.95□□□□□ -0.34
COL11A1-202ENST00000358392 MTIF2P46199 727 aaKnown RBP12.95□□□□□ -0.34
COL11A1-202ENST00000358392 CEP126Q9P2H0 1117 aa12.94□□□□□ -0.34
COL11A1-202ENST00000358392 ZNF644Q9H582 1327 aaPredicted RBP12.94□□□□□ -0.34
COL11A1-202ENST00000358392 MYO1BO43795 1136 aa12.94□□□□□ -0.34
COL11A1-202ENST00000358392 YEATS4O95619 227 aa12.94□□□□□ -0.34
COL11A1-202ENST00000358392 MXRA7P84157 204 aa12.94□□□□□ -0.34
COL11A1-202ENST00000358392 PPP1R14CQ8TAE6 165 aa12.94□□□□□ -0.34
COL11A1-202ENST00000358392 C8orf76Q96K31 380 aa12.94□□□□□ -0.34
COL11A1-202ENST00000358392 BMS1Q14692 1282 aaKnown RBP12.94□□□□□ -0.34
COL11A1-202ENST00000358392 METTL24Q5JXM2 366 aa12.94□□□□□ -0.34
COL11A1-202ENST00000358392 A0A1W2PRG0 241 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms