RNA–Protein interactions for RNA: ENST00000358028.8

NIPAL3-203, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 1,757 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-203ENST00000358028 IFT57Q9NWB7 429 aa18.14■□□□□ 0.49
NIPAL3-203ENST00000358028 DDX19BQ9UMR2 479 aa18.14■□□□□ 0.49
NIPAL3-203ENST00000358028 LAS1LQ9Y4W2 734 aaKnown RBP18.14■□□□□ 0.49
NIPAL3-203ENST00000358028 KIF24Q5T7B8 1368 aa18.13■□□□□ 0.49
NIPAL3-203ENST00000358028 IPO8O15397 1037 aaKnown RBP18.13■□□□□ 0.49
NIPAL3-203ENST00000358028 GNAI1P63096 354 aa18.13■□□□□ 0.49
NIPAL3-203ENST00000358028 LTV1Q96GA3 475 aaPredicted RBP18.13■□□□□ 0.49
NIPAL3-203ENST00000358028 DAXXQ9UER7 740 aaPredicted RBP18.13■□□□□ 0.49
NIPAL3-203ENST00000358028 A0A0G2JS52 829 aa18.12■□□□□ 0.49
NIPAL3-203ENST00000358028 HSP90AB2PQ58FF8 381 aa18.12■□□□□ 0.49
NIPAL3-203ENST00000358028 CCDC125Q86Z20 511 aa18.12■□□□□ 0.49
NIPAL3-203ENST00000358028 THUMPD2Q9BTF0 503 aaKnown RBP18.12■□□□□ 0.49
NIPAL3-203ENST00000358028 ZNF853P0CG23 659 aa18.12■□□□□ 0.49
NIPAL3-203ENST00000358028 RGPD1P0DJD0 1748 aa18.12■□□□□ 0.49
NIPAL3-203ENST00000358028 BRPF1P55201 1214 aaPredicted RBP18.11■□□□□ 0.49
NIPAL3-203ENST00000358028 EIF4A2Q14240 407 aaKnown RBP18.11■□□□□ 0.49
NIPAL3-203ENST00000358028 ITPRIPQ8IWB1 547 aa18.11■□□□□ 0.49
NIPAL3-203ENST00000358028 PDZRN3Q9UPQ7 1066 aa18.11■□□□□ 0.49
NIPAL3-203ENST00000358028 BARGINQ6ZT62 677 aa18.1■□□□□ 0.49
NIPAL3-203ENST00000358028 CARD10Q9BWT7 1032 aa18.1■□□□□ 0.49
NIPAL3-203ENST00000358028 SRCAPQ6ZRS2 3230 aa18.1■□□□□ 0.49
NIPAL3-203ENST00000358028 KRT27Q7Z3Y8 459 aa18.09■□□□□ 0.49
NIPAL3-203ENST00000358028 TMEM57Q8N5G2 664 aa18.09■□□□□ 0.49
NIPAL3-203ENST00000358028 BCL11AQ9H165 835 aa18.09■□□□□ 0.49
NIPAL3-203ENST00000358028 NLRP2Q9NX02 1062 aa18.09■□□□□ 0.49
NIPAL3-203ENST00000358028 THRAP3Q9Y2W1 955 aaKnown RBP18.09■□□□□ 0.49
NIPAL3-203ENST00000358028 MBIPQ9NS73 344 aa18.09■□□□□ 0.49
NIPAL3-203ENST00000358028 DISP2A7MBM2 1401 aa18.09■□□□□ 0.49
NIPAL3-203ENST00000358028 VAMP4O75379 141 aa18.08■□□□□ 0.48
NIPAL3-203ENST00000358028 HDAC1Q13547 482 aaPredicted RBP18.07■□□□□ 0.48
NIPAL3-203ENST00000358028 MRPL50Q8N5N7 158 aaKnown RBP18.07■□□□□ 0.48
NIPAL3-203ENST00000358028 CFAP44Q96MT7 982 aa18.07■□□□□ 0.48
NIPAL3-203ENST00000358028 SULT6B1Q6IMI4 303 aa18.06■□□□□ 0.48
NIPAL3-203ENST00000358028 AEBP1Q8IUX7 1158 aa18.06■□□□□ 0.48
NIPAL3-203ENST00000358028 SHANK3Q9BYB0 1731 aa18.06■□□□□ 0.48
NIPAL3-203ENST00000358028 TSPYL6Q8N831 410 aa18.05■□□□□ 0.48
NIPAL3-203ENST00000358028 ZBTB40Q9NUA8 1239 aa18.05■□□□□ 0.48
NIPAL3-203ENST00000358028 NBPF6Q5VWK0 638 aa18.04■□□□□ 0.48
NIPAL3-203ENST00000358028 ARHGAP45Q92619 1136 aa18.04■□□□□ 0.48
NIPAL3-203ENST00000358028 NBPF4Q96M43 638 aa18.04■□□□□ 0.48
NIPAL3-203ENST00000358028 USHBP1Q8N6Y0 703 aa18.04■□□□□ 0.48
NIPAL3-203ENST00000358028 TWISTNBQ3B726 338 aaPredicted RBP18.03■□□□□ 0.48
NIPAL3-203ENST00000358028 MEGF6O75095 1541 aa18.02■□□□□ 0.48
NIPAL3-203ENST00000358028 FAM182BQ5T319 152 aa18.02■□□□□ 0.48
NIPAL3-203ENST00000358028 SBF2Q86WG5 1849 aa18.02■□□□□ 0.47
NIPAL3-203ENST00000358028 DCTN1Q14203 1278 aa18.02■□□□□ 0.47
NIPAL3-203ENST00000358028 NCAPD2Q15021 1401 aa18.01■□□□□ 0.47
NIPAL3-203ENST00000358028 TNS2Q63HR2 1409 aa18.01■□□□□ 0.47
NIPAL3-203ENST00000358028 C8orf58Q8NAV2 365 aa18.01■□□□□ 0.47
NIPAL3-203ENST00000358028 IL2RBP14784 551 aa18■□□□□ 0.47
NIPAL3-203ENST00000358028 SMC5Q8IY18 1101 aa18■□□□□ 0.47
NIPAL3-203ENST00000358028 ELL2O00472 640 aaPredicted RBP17.99■□□□□ 0.47
NIPAL3-203ENST00000358028 DDB1Q16531 1140 aa17.99■□□□□ 0.47
NIPAL3-203ENST00000358028 DEFB132Q7Z7B7 95 aa17.99■□□□□ 0.47
NIPAL3-203ENST00000358028 CDCA7Q9BWT1 371 aaPredicted RBP17.99■□□□□ 0.47
NIPAL3-203ENST00000358028 CHMP4BQ9H444 224 aaKnown RBP17.99■□□□□ 0.47
NIPAL3-203ENST00000358028 UPF2Q9HAU5 1272 aaKnown RBP17.99■□□□□ 0.47
NIPAL3-203ENST00000358028 PKD1L3Q7Z443 1732 aa17.99■□□□□ 0.47
NIPAL3-203ENST00000358028 TNS1Q9HBL0 1735 aaKnown RBP17.99■□□□□ 0.47
NIPAL3-203ENST00000358028 EYA1Q99502 592 aa17.99■□□□□ 0.47
NIPAL3-203ENST00000358028 ABCC4O15439 1325 aa17.99■□□□□ 0.47
NIPAL3-203ENST00000358028 SEC24BO95487 1268 aa17.98■□□□□ 0.47
NIPAL3-203ENST00000358028 BECN1Q14457 450 aa17.97■□□□□ 0.47
NIPAL3-203ENST00000358028 OVOS2A0A0G2JMS6 1433 aa17.97■□□□□ 0.47
NIPAL3-203ENST00000358028 ZBTB7BO15156 539 aaPredicted RBP17.96■□□□□ 0.47
NIPAL3-203ENST00000358028 SF3B2Q13435 895 aaKnown RBP17.96■□□□□ 0.47
NIPAL3-203ENST00000358028 API5Q9BZZ5 524 aaKnown RBP17.96■□□□□ 0.47
NIPAL3-203ENST00000358028 CHL1O00533 1208 aa17.96■□□□□ 0.47
NIPAL3-203ENST00000358028 IGSF1Q8N6C5 1336 aa17.96■□□□□ 0.47
NIPAL3-203ENST00000358028 KDRP35968 1356 aa17.95■□□□□ 0.46
NIPAL3-203ENST00000358028 SLC4A3P48751 1232 aa17.95■□□□□ 0.46
NIPAL3-203ENST00000358028 NFKBIBQ15653 356 aa17.95■□□□□ 0.46
NIPAL3-203ENST00000358028 EXOC5O00471 708 aa17.94■□□□□ 0.46
NIPAL3-203ENST00000358028 MCM10Q7L590 875 aa17.94■□□□□ 0.46
NIPAL3-203ENST00000358028 KAT6BQ8WYB5 2073 aa17.94■□□□□ 0.46
NIPAL3-203ENST00000358028 MARCH10Q8NA82 808 aaPredicted RBP17.94■□□□□ 0.46
NIPAL3-203ENST00000358028 DOT1LQ8TEK3 1739 aa17.93■□□□□ 0.46
NIPAL3-203ENST00000358028 NUCB1Q02818 461 aa17.93■□□□□ 0.46
NIPAL3-203ENST00000358028 RAPGEF4Q8WZA2 1011 aa17.93■□□□□ 0.46
NIPAL3-203ENST00000358028 TBC1D32Q96NH3 1257 aa17.93■□□□□ 0.46
NIPAL3-203ENST00000358028 BAG6P46379 1132 aa17.91■□□□□ 0.46
NIPAL3-203ENST00000358028 MTHFSDQ2M296 383 aaKnown RBP17.91■□□□□ 0.46
NIPAL3-203ENST00000358028 FAM196AQ6ZSG2 479 aa17.91■□□□□ 0.46
NIPAL3-203ENST00000358028 TATP17735 454 aaPredicted RBP17.91■□□□□ 0.46
NIPAL3-203ENST00000358028 NHSQ6T4R5 1651 aa17.91■□□□□ 0.46
NIPAL3-203ENST00000358028 KRT24Q2M2I5 525 aa17.89■□□□□ 0.45
NIPAL3-203ENST00000358028 C1orf115Q9H7X2 142 aa17.89■□□□□ 0.45
NIPAL3-203ENST00000358028 TOGARAM1Q9Y4F4 1720 aa17.89■□□□□ 0.45
NIPAL3-203ENST00000358028 CHD1LQ86WJ1 897 aa17.89■□□□□ 0.45
NIPAL3-203ENST00000358028 GAS2L2Q8NHY3 880 aa17.89■□□□□ 0.45
NIPAL3-203ENST00000358028 ZCRB1Q8TBF4 217 aaKnown RBP17.89■□□□□ 0.45
NIPAL3-203ENST00000358028 DDX54Q8TDD1 881 aaKnown RBP17.89■□□□□ 0.45
NIPAL3-203ENST00000358028 RTF1Q92541 710 aaKnown RBP17.89■□□□□ 0.45
NIPAL3-203ENST00000358028 GCC1Q96CN9 775 aa17.89■□□□□ 0.45
NIPAL3-203ENST00000358028 BCL9O00512 1426 aa17.88■□□□□ 0.45
NIPAL3-203ENST00000358028 TRIM37O94972 964 aa17.87■□□□□ 0.45
NIPAL3-203ENST00000358028 BTAF1O14981 1849 aa17.87■□□□□ 0.45
NIPAL3-203ENST00000358028 EN1Q05925 392 aaPredicted RBP17.86■□□□□ 0.45
NIPAL3-203ENST00000358028 INTS3Q68E01 1043 aaKnown RBP17.86■□□□□ 0.45
NIPAL3-203ENST00000358028 ITGB4P16144 1822 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms