RNA–Protein interactions for RNA: ENST00000357732.8

RTN4-204, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,390 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-204ENST00000357732 LRRC37A3O60309 1634 aa21.62■■□□□ 1.05
RTN4-204ENST00000357732 GNAI3P08754 354 aa21.62■■□□□ 1.05
RTN4-204ENST00000357732 RTF1Q92541 710 aaKnown RBP21.62■■□□□ 1.05
RTN4-204ENST00000357732 UBR1Q8IWV7 1749 aa21.62■■□□□ 1.05
RTN4-204ENST00000357732 CACNA1FO60840 1977 aa21.62■■□□□ 1.05
RTN4-204ENST00000357732 PXDNLA1KZ92 1463 aa21.61■■□□□ 1.05
RTN4-204ENST00000357732 AOX1Q06278 1338 aa21.61■■□□□ 1.05
RTN4-204ENST00000357732 LTKP29376 864 aa21.61■■□□□ 1.05
RTN4-204ENST00000357732 CUL4AQ13619 759 aa21.61■■□□□ 1.05
RTN4-204ENST00000357732 PDZRN4Q6ZMN7 1036 aaPredicted RBP21.61■■□□□ 1.05
RTN4-204ENST00000357732 ZDHHC9Q9Y397 364 aa21.61■■□□□ 1.05
RTN4-204ENST00000357732 PKP1Q13835 747 aa21.6■■□□□ 1.05
RTN4-204ENST00000357732 HSP90AA2PQ14568 343 aaPredicted RBP21.6■■□□□ 1.05
RTN4-204ENST00000357732 ZGPATQ8N5A5 531 aaKnown RBP21.6■■□□□ 1.05
RTN4-204ENST00000357732 SBNO1A3KN83 1393 aa21.6■■□□□ 1.05
RTN4-204ENST00000357732 OFD1O75665 1012 aa21.6■■□□□ 1.05
RTN4-204ENST00000357732 LRRCC1Q9C099 1032 aa21.6■■□□□ 1.05
RTN4-204ENST00000357732 TSPYL4Q9UJ04 414 aa21.6■■□□□ 1.05
RTN4-204ENST00000357732 FLT4P35916 1363 aa21.59■■□□□ 1.05
RTN4-204ENST00000357732 FAM208AQ9UK61 1670 aaKnown RBP21.59■■□□□ 1.05
RTN4-204ENST00000357732 MCM5P33992 734 aa21.59■■□□□ 1.05
RTN4-204ENST00000357732 ESYT1Q9BSJ8 1104 aa21.59■■□□□ 1.05
RTN4-204ENST00000357732 STK31Q9BXU1 1019 aa21.59■■□□□ 1.05
RTN4-204ENST00000357732 PRPF40AO75400 957 aaKnown RBP21.59■■□□□ 1.05
RTN4-204ENST00000357732 NCLP19338 710 aaKnown RBP21.59■■□□□ 1.05
RTN4-204ENST00000357732 LRSAM1Q6UWE0 723 aa21.59■■□□□ 1.05
RTN4-204ENST00000357732 GPT2Q8TD30 523 aa21.58■■□□□ 1.05
RTN4-204ENST00000357732 TMX3Q96JJ7 454 aa21.58■■□□□ 1.05
RTN4-204ENST00000357732 MIS18AQ9NYP9 233 aa21.58■■□□□ 1.05
RTN4-204ENST00000357732 STAP2Q9UGK3 403 aa21.58■■□□□ 1.05
RTN4-204ENST00000357732 NOL7Q9UMY1 257 aaKnown RBP21.58■■□□□ 1.05
RTN4-204ENST00000357732 XRN1Q8IZH2 1706 aaKnown RBP21.58■■□□□ 1.04
RTN4-204ENST00000357732 BABAM1Q9NWV8 329 aa21.58■■□□□ 1.04
RTN4-204ENST00000357732 SLC26A8Q96RN1 970 aa21.57■■□□□ 1.04
RTN4-204ENST00000357732 APBB1O00213 710 aa21.56■■□□□ 1.04
RTN4-204ENST00000357732 FOXO3O43524 673 aa21.56■■□□□ 1.04
RTN4-204ENST00000357732 ZNF500O60304 480 aaPredicted RBP21.56■■□□□ 1.04
RTN4-204ENST00000357732 BRD1O95696 1058 aa21.56■■□□□ 1.04
RTN4-204ENST00000357732 MX1P20591 662 aa21.56■■□□□ 1.04
RTN4-204ENST00000357732 NEK4P51957 841 aa21.56■■□□□ 1.04
RTN4-204ENST00000357732 PLEKHG1Q9ULL1 1385 aa21.56■■□□□ 1.04
RTN4-204ENST00000357732 MAP3K19Q56UN5 1328 aa21.56■■□□□ 1.04
RTN4-204ENST00000357732 PTPRUQ92729 1446 aa21.56■■□□□ 1.04
RTN4-204ENST00000357732 RBSNQ9H1K0 784 aa21.56■■□□□ 1.04
RTN4-204ENST00000357732 ATP8B2P98198 1209 aa21.55■■□□□ 1.04
RTN4-204ENST00000357732 CCDC30Q5VVM6 783 aa21.55■■□□□ 1.04
RTN4-204ENST00000357732 IGSF1Q8N6C5 1336 aa21.55■■□□□ 1.04
RTN4-204ENST00000357732 PRIM1P49642 420 aaKnown RBP21.55■■□□□ 1.04
RTN4-204ENST00000357732 MTHFSDQ2M296 383 aaKnown RBP21.55■■□□□ 1.04
RTN4-204ENST00000357732 SLC4A10Q6U841 1118 aa21.55■■□□□ 1.04
RTN4-204ENST00000357732 G2E3Q7L622 706 aa21.54■■□□□ 1.04
RTN4-204ENST00000357732 SYAP1Q96A49 352 aaPredicted RBP21.54■■□□□ 1.04
RTN4-204ENST00000357732 KLHL34Q8N239 644 aa21.53■■□□□ 1.04
RTN4-204ENST00000357732 CHMLP26374 656 aa21.53■■□□□ 1.04
RTN4-204ENST00000357732 FLIIQ13045 1269 aa21.52■■□□□ 1.04
RTN4-204ENST00000357732 KIAA1211Q6ZU35 1233 aa21.52■■□□□ 1.04
RTN4-204ENST00000357732 RIMS1Q86UR5 1692 aaKnown RBP21.51■■□□□ 1.03
RTN4-204ENST00000357732 F6X3S4 739 aa21.51■■□□□ 1.03
RTN4-204ENST00000357732 TMEM63CQ9P1W3 806 aa21.51■■□□□ 1.03
RTN4-204ENST00000357732 KIF13AQ9H1H9 1805 aa21.51■■□□□ 1.03
RTN4-204ENST00000357732 PHF14O94880 888 aa21.51■■□□□ 1.03
RTN4-204ENST00000357732 EXOC6BQ9Y2D4 811 aa21.51■■□□□ 1.03
RTN4-204ENST00000357732 CEBPAP49715 358 aaPredicted RBP21.5■■□□□ 1.03
RTN4-204ENST00000357732 CSPP1Q1MSJ5 1256 aa21.5■■□□□ 1.03
RTN4-204ENST00000357732 CCDC39Q9UFE4 941 aa21.5■■□□□ 1.03
RTN4-204ENST00000357732 AMOTL2Q9Y2J4 779 aa21.49■■□□□ 1.03
RTN4-204ENST00000357732 ZKSCAN5Q9Y2L8 839 aa21.48■■□□□ 1.03
RTN4-204ENST00000357732 RAB11FIP3O75154 756 aa21.48■■□□□ 1.03
RTN4-204ENST00000357732 FKBP5Q13451 457 aaPredicted RBP21.48■■□□□ 1.03
RTN4-204ENST00000357732 ANO2Q9NQ90 1003 aa21.48■■□□□ 1.03
RTN4-204ENST00000357732 USP54Q70EL1 1684 aa21.48■■□□□ 1.03
RTN4-204ENST00000357732 CEP170BQ9Y4F5 1589 aaPredicted RBP21.47■■□□□ 1.03
RTN4-204ENST00000357732 WDR33Q9C0J8 1336 aaKnown RBP21.47■■□□□ 1.03
RTN4-204ENST00000357732 EYA1Q99502 592 aa21.47■■□□□ 1.03
RTN4-204ENST00000357732 RBM27Q9P2N5 1060 aaKnown RBP21.47■■□□□ 1.03
RTN4-204ENST00000357732 SYCE3A1L190 88 aa21.46■■□□□ 1.03
RTN4-204ENST00000357732 PLEKHG5O94827 1062 aa21.46■■□□□ 1.03
RTN4-204ENST00000357732 NGDNQ8NEJ9 315 aaKnown RBP21.46■■□□□ 1.03
RTN4-204ENST00000357732 PDCL3Q9H2J4 239 aa21.46■■□□□ 1.03
RTN4-204ENST00000357732 GNAT3A8MTJ3 354 aa21.46■■□□□ 1.03
RTN4-204ENST00000357732 AMPHP49418 695 aa21.46■■□□□ 1.03
RTN4-204ENST00000357732 CHMP4AQ9BY43 222 aa21.46■■□□□ 1.03
RTN4-204ENST00000357732 DNAJC5Q9H3Z4 198 aa21.46■■□□□ 1.03
RTN4-204ENST00000357732 EID1Q9Y6B2 187 aa21.46■■□□□ 1.03
RTN4-204ENST00000357732 PNMA6EA0A0J9YXQ4 647 aa21.45■■□□□ 1.02
RTN4-204ENST00000357732 TRIM6-TRIM34B2RNG4 842 aa21.45■■□□□ 1.02
RTN4-204ENST00000357732 FAM184AQ8NB25 1140 aa21.45■■□□□ 1.02
RTN4-204ENST00000357732 SSH3Q8TE77 659 aa21.45■■□□□ 1.02
RTN4-204ENST00000357732 HSPA4P34932 840 aa21.45■■□□□ 1.02
RTN4-204ENST00000357732 PALD1Q9ULE6 856 aa21.45■■□□□ 1.02
RTN4-204ENST00000357732 TMEM87AQ8NBN3 555 aa21.44■■□□□ 1.02
RTN4-204ENST00000357732 PIK3C2AO00443 1686 aa21.44■■□□□ 1.02
RTN4-204ENST00000357732 RILPL2Q969X0 211 aa21.44■■□□□ 1.02
RTN4-204ENST00000357732 TSPY26PQ9H489 355 aa21.44■■□□□ 1.02
RTN4-204ENST00000357732 EIF2AK3Q9NZJ5 1116 aaKnown RBP21.43■■□□□ 1.02
RTN4-204ENST00000357732 MAP3K5Q99683 1374 aa21.43■■□□□ 1.02
RTN4-204ENST00000357732 UBTFL1P0CB47 393 aaPredicted RBP21.43■■□□□ 1.02
RTN4-204ENST00000357732 UVSSAQ2YD98 709 aa21.42■■□□□ 1.02
RTN4-204ENST00000357732 PLPPR3Q6T4P5 718 aa21.42■■□□□ 1.02
RTN4-204ENST00000357732 MAP7D2Q96T17 732 aa21.42■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 735.4 ms