RNA–Protein interactions for RNA: ENST00000357508.5

C1orf228-201, Transcript of Uncharacterized protein C1orf228, humanhuman

TSL 1 (best)

Gene C1orf228, Length 2,113 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1orf228-201ENST00000357508 ANKRD44Q8N8A2 993 aa32.65■■■□□ 2.82
C1orf228-201ENST00000357508 UPF2Q9HAU5 1272 aaKnown RBP32.65■■■□□ 2.82
C1orf228-201ENST00000357508 AKAP4Q5JQC9 854 aa32.64■■■□□ 2.82
C1orf228-201ENST00000357508 LGR6Q9HBX8 967 aa32.64■■■□□ 2.82
C1orf228-201ENST00000357508 SLC4A3P48751 1232 aa32.63■■■□□ 2.81
C1orf228-201ENST00000357508 ZNF530Q6P9A1 599 aaPredicted RBP32.63■■■□□ 2.81
C1orf228-201ENST00000357508 MEIS3Q99687 375 aa32.63■■■□□ 2.81
C1orf228-201ENST00000357508 AMOTQ4VCS5 1084 aa32.63■■■□□ 2.81
C1orf228-201ENST00000357508 F6X3S4 739 aa32.62■■■□□ 2.81
C1orf228-201ENST00000357508 TBC1D32Q96NH3 1257 aa32.62■■■□□ 2.81
C1orf228-201ENST00000357508 CCT4P50991 539 aaKnown RBP32.62■■■□□ 2.81
C1orf228-201ENST00000357508 RPAP2Q8IXW5 612 aaPredicted RBP32.62■■■□□ 2.81
C1orf228-201ENST00000357508 DAXXQ9UER7 740 aaPredicted RBP32.62■■■□□ 2.81
C1orf228-201ENST00000357508 FLIIQ13045 1269 aa32.61■■■□□ 2.81
C1orf228-201ENST00000357508 CEP85Q6P2H3 762 aa32.61■■■□□ 2.81
C1orf228-201ENST00000357508 DCTPP1Q9H773 170 aa32.61■■■□□ 2.81
C1orf228-201ENST00000357508 COL18A1P39060 1754 aa32.6■■■□□ 2.81
C1orf228-201ENST00000357508 NBR1Q14596 966 aa32.6■■■□□ 2.81
C1orf228-201ENST00000357508 AHDC1Q5TGY3 1603 aaPredicted RBP32.6■■■□□ 2.81
C1orf228-201ENST00000357508 TOM1O60784 492 aa32.59■■■□□ 2.81
C1orf228-201ENST00000357508 CHRNA2Q15822 529 aa32.59■■■□□ 2.81
C1orf228-201ENST00000357508 SLC4A10Q6U841 1118 aa32.59■■■□□ 2.81
C1orf228-201ENST00000357508 NECTIN2Q92692 538 aa32.59■■■□□ 2.81
C1orf228-201ENST00000357508 CPDO75976 1380 aa32.59■■■□□ 2.81
C1orf228-201ENST00000357508 ERBB3P21860 1342 aa32.58■■■□□ 2.81
C1orf228-201ENST00000357508 OVOS2A0A0G2JMS6 1433 aa32.58■■■□□ 2.81
C1orf228-201ENST00000357508 SIPA1L3O60292 1781 aaPredicted RBP32.57■■■□□ 2.8
C1orf228-201ENST00000357508 BMP2KLQ5H9B9 411 aa32.57■■■□□ 2.8
C1orf228-201ENST00000357508 PIP4K2BP78356 416 aa32.56■■■□□ 2.8
C1orf228-201ENST00000357508 EIF4A1P60842 406 aaKnown RBP32.56■■■□□ 2.8
C1orf228-201ENST00000357508 FKBP5Q13451 457 aaPredicted RBP32.56■■■□□ 2.8
C1orf228-201ENST00000357508 ADAMTS7Q9UKP4 1686 aa32.55■■■□□ 2.8
C1orf228-201ENST00000357508 HDGFL1Q5TGJ6 251 aa32.54■■■□□ 2.8
C1orf228-201ENST00000357508 MPRIPQ6WCQ1 1025 aa32.54■■■□□ 2.8
C1orf228-201ENST00000357508 PXDNLA1KZ92 1463 aa32.54■■■□□ 2.8
C1orf228-201ENST00000357508 TEFQ10587 303 aa32.54■■■□□ 2.8
C1orf228-201ENST00000357508 C1orf141Q5JVX7 400 aa32.54■■■□□ 2.8
C1orf228-201ENST00000357508 RNMTO43148 476 aaKnown RBP32.53■■■□□ 2.8
C1orf228-201ENST00000357508 ABCA3Q99758 1704 aa32.52■■■□□ 2.8
C1orf228-201ENST00000357508 HOXB7P09629 217 aa32.51■■■□□ 2.8
C1orf228-201ENST00000357508 UBAP1LF5GYI3 381 aa32.51■■■□□ 2.79
C1orf228-201ENST00000357508 MFAP1P55081 439 aaKnown RBP32.5■■■□□ 2.79
C1orf228-201ENST00000357508 PRDM11Q9NQV5 511 aa32.5■■■□□ 2.79
C1orf228-201ENST00000357508 ABCC6O95255 1503 aa32.49■■■□□ 2.79
C1orf228-201ENST00000357508 BTBD11A6QL63 1104 aa32.49■■■□□ 2.79
C1orf228-201ENST00000357508 KCNQ3O43525 872 aa32.49■■■□□ 2.79
C1orf228-201ENST00000357508 C22orf23Q9BZE7 217 aa32.46■■■□□ 2.79
C1orf228-201ENST00000357508 SCN11AQ9UI33 1791 aa32.46■■■□□ 2.79
C1orf228-201ENST00000357508 PHAXQ9H814 394 aaKnown RBP32.45■■■□□ 2.79
C1orf228-201ENST00000357508 HMMRO75330 724 aa32.45■■■□□ 2.78
C1orf228-201ENST00000357508 GNAI2P04899 355 aa32.45■■■□□ 2.78
C1orf228-201ENST00000357508 PLEKHM2Q8IWE5 1019 aa32.45■■■□□ 2.78
C1orf228-201ENST00000357508 BECN1Q14457 450 aa32.44■■■□□ 2.78
C1orf228-201ENST00000357508 PHLPP1O60346 1717 aa32.44■■■□□ 2.78
C1orf228-201ENST00000357508 EIF2S2P20042 333 aaKnown RBP32.44■■■□□ 2.78
C1orf228-201ENST00000357508 COL16A1Q07092 1604 aaPredicted RBP32.43■■■□□ 2.78
C1orf228-201ENST00000357508 GNAI3P08754 354 aa32.43■■■□□ 2.78
C1orf228-201ENST00000357508 CHMP4AQ9BY43 222 aa32.43■■■□□ 2.78
C1orf228-201ENST00000357508 NLRP2Q9NX02 1062 aa32.43■■■□□ 2.78
C1orf228-201ENST00000357508 CSB-PGBD3P0DP91 1061 aa32.42■■■□□ 2.78
C1orf228-201ENST00000357508 CERKQ8TCT0 537 aa32.42■■■□□ 2.78
C1orf228-201ENST00000357508 RAPGEF4Q8WZA2 1011 aa32.4■■■□□ 2.78
C1orf228-201ENST00000357508 CHPF2Q9P2E5 772 aa32.4■■■□□ 2.78
C1orf228-201ENST00000357508 HEG1Q9ULI3 1381 aa32.39■■■□□ 2.78
C1orf228-201ENST00000357508 COL22A1Q8NFW1 1626 aaPredicted RBP32.39■■■□□ 2.78
C1orf228-201ENST00000357508 C16orf71Q8IYS4 520 aaPredicted RBP32.39■■■□□ 2.78
C1orf228-201ENST00000357508 MEGF6O75095 1541 aa32.39■■■□□ 2.77
C1orf228-201ENST00000357508 GSPT1P15170 499 aaKnown RBP32.38■■■□□ 2.77
C1orf228-201ENST00000357508 RTL5Q5HYW3 569 aaPredicted RBP32.38■■■□□ 2.77
C1orf228-201ENST00000357508 PKD1L3Q7Z443 1732 aa32.37■■■□□ 2.77
C1orf228-201ENST00000357508 TTC22Q5TAA0 569 aa32.36■■■□□ 2.77
C1orf228-201ENST00000357508 SMARCA5O60264 1052 aaPredicted RBP32.35■■■□□ 2.77
C1orf228-201ENST00000357508 TATP17735 454 aaPredicted RBP32.35■■■□□ 2.77
C1orf228-201ENST00000357508 TBC1D9Q6ZT07 1266 aa32.35■■■□□ 2.77
C1orf228-201ENST00000357508 USP44Q9H0E7 712 aa32.35■■■□□ 2.77
C1orf228-201ENST00000357508 OTUD7AQ8TE49 926 aaPredicted RBP32.35■■■□□ 2.77
C1orf228-201ENST00000357508 COL5A2P05997 1499 aaPredicted RBP32.34■■■□□ 2.77
C1orf228-201ENST00000357508 APBB1O00213 710 aa32.34■■■□□ 2.77
C1orf228-201ENST00000357508 KDM6AO15550 1401 aaPredicted RBP32.34■■■□□ 2.77
C1orf228-201ENST00000357508 PLEKHG2Q9H7P9 1386 aa32.34■■■□□ 2.77
C1orf228-201ENST00000357508 GIGYF1O75420 1035 aaPredicted RBP32.33■■■□□ 2.77
C1orf228-201ENST00000357508 RBM25P49756 843 aaKnown RBP32.33■■■□□ 2.77
C1orf228-201ENST00000357508 ATP8B2P98198 1209 aa32.33■■■□□ 2.77
C1orf228-201ENST00000357508 TBC1D2Q9BYX2 928 aa32.33■■■□□ 2.77
C1orf228-201ENST00000357508 WDR17Q8IZU2 1322 aa32.33■■■□□ 2.77
C1orf228-201ENST00000357508 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP32.32■■■□□ 2.76
C1orf228-201ENST00000357508 USP35Q9P2H5 1018 aa32.32■■■□□ 2.76
C1orf228-201ENST00000357508 LRRFIP2Q9Y608 721 aaKnown RBP32.32■■■□□ 2.76
C1orf228-201ENST00000357508 CDC45O75419 566 aa32.32■■■□□ 2.76
C1orf228-201ENST00000357508 SPG7Q9UQ90 795 aa32.32■■■□□ 2.76
C1orf228-201ENST00000357508 SRCIN1Q9C0H9 1055 aa32.31■■■□□ 2.76
C1orf228-201ENST00000357508 DBF4Q9UBU7 674 aaPredicted RBP32.31■■■□□ 2.76
C1orf228-201ENST00000357508 PNMA6EA0A0J9YXQ4 647 aa32.3■■■□□ 2.76
C1orf228-201ENST00000357508 PHKG2P15735 406 aa32.3■■■□□ 2.76
C1orf228-201ENST00000357508 BCL11AQ9H165 835 aa32.3■■■□□ 2.76
C1orf228-201ENST00000357508 ANXA1P04083 346 aa32.3■■■□□ 2.76
C1orf228-201ENST00000357508 UBTFL1P0CB47 393 aaPredicted RBP32.3■■■□□ 2.76
C1orf228-201ENST00000357508 C5P01031 1676 aa32.29■■■□□ 2.76
C1orf228-201ENST00000357508 DNAAF4Q8WXU2 420 aa32.29■■■□□ 2.76
C1orf228-201ENST00000357508 ADCY9O60503 1353 aa32.29■■■□□ 2.76
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms