RNA–Protein interactions for RNA: ENST00000357450.8

SMC1B-201, Transcript of structural maintenance of chromosomes 1B, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMC1B, Length 4,201 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1B-201ENST00000357450 RTF1Q92541 710 aaKnown RBP5.03□□□□□ -1.6
SMC1B-201ENST00000357450 ARHGEF40Q8TER5 1519 aa5.03□□□□□ -1.6
SMC1B-201ENST00000357450 CENPJQ9HC77 1338 aaPredicted RBP5.03□□□□□ -1.6
SMC1B-201ENST00000357450 SCAF11Q99590 1463 aaKnown RBP5.03□□□□□ -1.6
SMC1B-201ENST00000357450 ROCK2O75116 1388 aaKnown RBP5.03□□□□□ -1.6
SMC1B-201ENST00000357450 PTCD1O75127 700 aaKnown RBP5.03□□□□□ -1.6
SMC1B-201ENST00000357450 TTC5Q8N0Z6 440 aa5.03□□□□□ -1.6
SMC1B-201ENST00000357450 SETD1BQ9UPS6 1966 aaKnown RBP5.03□□□□□ -1.6
SMC1B-201ENST00000357450 PRIM1P49642 420 aaKnown RBP5.03□□□□□ -1.6
SMC1B-201ENST00000357450 PNISRQ8TF01 805 aaKnown RBP5.02□□□□□ -1.61
SMC1B-201ENST00000357450 UPF1Q92900 1129 aaKnown RBP eCLIP5.02□□□□□ -1.61
SMC1B-201ENST00000357450 L3MBTL2Q969R5 705 aa5.02□□□□□ -1.61
SMC1B-201ENST00000357450 CFAP53Q96M91 514 aa5.02□□□□□ -1.61
SMC1B-201ENST00000357450 PRKRIP1Q9H875 184 aaPredicted RBP5.02□□□□□ -1.61
SMC1B-201ENST00000357450 ADGRF5Q8IZF2 1346 aa5.02□□□□□ -1.61
SMC1B-201ENST00000357450 BEGAINQ9BUH8 593 aa5.02□□□□□ -1.61
SMC1B-201ENST00000357450 SCUBE2Q9NQ36 999 aa5.02□□□□□ -1.61
SMC1B-201ENST00000357450 BCS1LQ9Y276 419 aa5.02□□□□□ -1.61
SMC1B-201ENST00000357450 FBXW7Q969H0 707 aa5.02□□□□□ -1.61
SMC1B-201ENST00000357450 GGNBP2Q9H3C7 697 aa5.02□□□□□ -1.61
SMC1B-201ENST00000357450 LAMB4A4D0S4 1761 aa5.02□□□□□ -1.61
SMC1B-201ENST00000357450 TEFQ10587 303 aa5.02□□□□□ -1.61
SMC1B-201ENST00000357450 CC2D1BQ5T0F9 858 aaKnown RBP5.02□□□□□ -1.61
SMC1B-201ENST00000357450 TCP11L2Q8N4U5 519 aa5.02□□□□□ -1.61
SMC1B-201ENST00000357450 PKD1L3Q7Z443 1732 aa5.01□□□□□ -1.61
SMC1B-201ENST00000357450 NWD2Q9ULI1 1742 aa5.01□□□□□ -1.61
SMC1B-201ENST00000357450 RGS12O14924 1447 aa5.01□□□□□ -1.61
SMC1B-201ENST00000357450 USHBP1Q8N6Y0 703 aa5.01□□□□□ -1.61
SMC1B-201ENST00000357450 KHSRPQ92945 711 aaKnown RBP eCLIP5.01□□□□□ -1.61
SMC1B-201ENST00000357450 REV3LO60673 3130 aa5.01□□□□□ -1.61
SMC1B-201ENST00000357450 ARHGAP27Q6ZUM4 889 aa5.01□□□□□ -1.61
SMC1B-201ENST00000357450 ZFYVE9O95405 1425 aa5.01□□□□□ -1.61
SMC1B-201ENST00000357450 PHLPP1O60346 1717 aa5.01□□□□□ -1.61
SMC1B-201ENST00000357450 GPBP1L1Q9HC44 474 aaPredicted RBP5.01□□□□□ -1.61
SMC1B-201ENST00000357450 NUDCQ9Y266 331 aa5.01□□□□□ -1.61
SMC1B-201ENST00000357450 CICQ96RK0 1608 aaPredicted RBP5.01□□□□□ -1.61
SMC1B-201ENST00000357450 WASLO00401 505 aaPredicted RBP5□□□□□ -1.61
SMC1B-201ENST00000357450 KCNQ4P56696 695 aa5□□□□□ -1.61
SMC1B-201ENST00000357450 TTC13Q8NBP0 860 aa5□□□□□ -1.61
SMC1B-201ENST00000357450 ZNF622Q969S3 477 aaKnown RBP eCLIP5□□□□□ -1.61
SMC1B-201ENST00000357450 RPGRIP1LQ68CZ1 1315 aa5□□□□□ -1.61
SMC1B-201ENST00000357450 SBNO2Q9Y2G9 1366 aa5□□□□□ -1.61
SMC1B-201ENST00000357450 NPATQ14207 1427 aa5□□□□□ -1.61
SMC1B-201ENST00000357450 SSH2Q76I76 1423 aa5□□□□□ -1.61
SMC1B-201ENST00000357450 NCOA3Q9Y6Q9 1424 aa5□□□□□ -1.61
SMC1B-201ENST00000357450 ALKQ9UM73 1620 aa5□□□□□ -1.61
SMC1B-201ENST00000357450 EZH2Q15910 746 aaKnown RBP5□□□□□ -1.61
SMC1B-201ENST00000357450 KCNH5Q8NCM2 988 aa5□□□□□ -1.61
SMC1B-201ENST00000357450 SCN11AQ9UI33 1791 aa5□□□□□ -1.61
SMC1B-201ENST00000357450 A2ML1A8K2U0 1454 aa5□□□□□ -1.61
SMC1B-201ENST00000357450 EIF4G2P78344 907 aaKnown RBP eCLIP5□□□□□ -1.61
SMC1B-201ENST00000357450 TOGARAM1Q9Y4F4 1720 aa5□□□□□ -1.61
SMC1B-201ENST00000357450 NPC1L1Q9UHC9 1359 aa4.99□□□□□ -1.61
SMC1B-201ENST00000357450 ACEP12821 1306 aa4.99□□□□□ -1.61
SMC1B-201ENST00000357450 ZPR1O75312 459 aa4.99□□□□□ -1.61
SMC1B-201ENST00000357450 GPHNQ9NQX3 736 aaPredicted RBP4.99□□□□□ -1.61
SMC1B-201ENST00000357450 GCP02774 474 aa4.99□□□□□ -1.61
SMC1B-201ENST00000357450 HSPA5P11021 654 aaKnown RBP4.99□□□□□ -1.61
SMC1B-201ENST00000357450 RFC4P35249 363 aa4.99□□□□□ -1.61
SMC1B-201ENST00000357450 LARP1Q6PKG0 1096 aaKnown RBP4.99□□□□□ -1.61
SMC1B-201ENST00000357450 CCNL1Q9UK58 526 aaPredicted RBP4.99□□□□□ -1.61
SMC1B-201ENST00000357450 AGLP35573 1532 aa4.99□□□□□ -1.61
SMC1B-201ENST00000357450 TCHHQ07283 1943 aa4.99□□□□□ -1.61
SMC1B-201ENST00000357450 MAPK8IP3Q9UPT6 1336 aa4.99□□□□□ -1.61
SMC1B-201ENST00000357450 CABP4P57796 275 aa4.99□□□□□ -1.61
SMC1B-201ENST00000357450 CCDC125Q86Z20 511 aa4.99□□□□□ -1.61
SMC1B-201ENST00000357450 TMOD3Q9NYL9 352 aa4.99□□□□□ -1.61
SMC1B-201ENST00000357450 PARP4Q9UKK3 1724 aaKnown RBP4.99□□□□□ -1.61
SMC1B-201ENST00000357450 RREB1Q92766 1687 aa4.99□□□□□ -1.61
SMC1B-201ENST00000357450 EIF3AQ14152 1382 aaKnown RBP4.99□□□□□ -1.61
SMC1B-201ENST00000357450 DDIT3P35638 169 aa4.99□□□□□ -1.61
SMC1B-201ENST00000357450 GOLGA2Q08379 1002 aa4.99□□□□□ -1.61
SMC1B-201ENST00000357450 SLIT1O75093 1534 aa4.98□□□□□ -1.61
SMC1B-201ENST00000357450 RRS1Q15050 365 aaKnown RBP4.98□□□□□ -1.61
SMC1B-201ENST00000357450 MYO15AQ9UKN7 3530 aa4.98□□□□□ -1.61
SMC1B-201ENST00000357450 MYO5AQ9Y4I1 1855 aaKnown RBP4.98□□□□□ -1.61
SMC1B-201ENST00000357450 FCHSD2O94868 740 aa4.98□□□□□ -1.61
SMC1B-201ENST00000357450 WDR43Q15061 677 aaKnown RBP eCLIP4.98□□□□□ -1.61
SMC1B-201ENST00000357450 ZNF428Q96B54 188 aa4.98□□□□□ -1.61
SMC1B-201ENST00000357450 FANCIQ9NVI1 1328 aa4.98□□□□□ -1.61
SMC1B-201ENST00000357450 ANKRD36CQ5JPF3 1778 aa4.98□□□□□ -1.61
SMC1B-201ENST00000357450 CHD4Q14839 1912 aa4.98□□□□□ -1.61
SMC1B-201ENST00000357450 GIGYF1O75420 1035 aaPredicted RBP4.98□□□□□ -1.61
SMC1B-201ENST00000357450 NBPF1Q3BBV0 1214 aa4.98□□□□□ -1.61
SMC1B-201ENST00000357450 SLC12A5Q9H2X9 1139 aa4.98□□□□□ -1.61
SMC1B-201ENST00000357450 HMGB2P26583 209 aaKnown RBP4.97□□□□□ -1.61
SMC1B-201ENST00000357450 NKTRP30414 1462 aaKnown RBP4.97□□□□□ -1.61
SMC1B-201ENST00000357450 ZBED9Q6R2W3 1325 aa4.97□□□□□ -1.61
SMC1B-201ENST00000357450 PLCH1Q4KWH8 1693 aa4.97□□□□□ -1.61
SMC1B-201ENST00000357450 ANKRD24Q8TF21 1146 aa4.97□□□□□ -1.61
SMC1B-201ENST00000357450 NCAPD2Q15021 1401 aa4.97□□□□□ -1.61
SMC1B-201ENST00000357450 FAM83GA6ND36 823 aa4.97□□□□□ -1.61
SMC1B-201ENST00000357450 U2AF1L5P0DN76 240 aaPredicted RBP4.97□□□□□ -1.61
SMC1B-201ENST00000357450 CANXP27824 592 aaKnown RBP4.97□□□□□ -1.61
SMC1B-201ENST00000357450 U2AF1Q01081 240 aaKnown RBP eCLIP4.97□□□□□ -1.61
SMC1B-201ENST00000357450 AMER1Q5JTC6 1135 aaPredicted RBP4.97□□□□□ -1.61
SMC1B-201ENST00000357450 L3MBTL3Q96JM7 780 aaPredicted RBP4.97□□□□□ -1.61
SMC1B-201ENST00000357450 ZNF408Q9H9D4 720 aa4.97□□□□□ -1.61
SMC1B-201ENST00000357450 SPG7Q9UQ90 795 aa4.97□□□□□ -1.61
SMC1B-201ENST00000357450 FRAT2O75474 233 aaPredicted RBP4.96□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms