RNA–Protein interactions for RNA: ENST00000356316.7

CAPN3-204, Transcript of calpain 3, humanhuman

TSL 5 BASIC

Gene CAPN3, Length 1,291 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-204ENST00000356316 MSL1Q68DK7 614 aa14.54□□□□□ -0.08
CAPN3-204ENST00000356316 COL24A1Q17RW2 1714 aa14.54□□□□□ -0.08
CAPN3-204ENST00000356316 TOGARAM1Q9Y4F4 1720 aa14.53□□□□□ -0.08
CAPN3-204ENST00000356316 ATP6V1AP38606 617 aa14.53□□□□□ -0.08
CAPN3-204ENST00000356316 AMOTQ4VCS5 1084 aa14.53□□□□□ -0.08
CAPN3-204ENST00000356316 GOLGB1Q14789 3259 aaKnown RBP14.52□□□□□ -0.08
CAPN3-204ENST00000356316 IGSF1Q8N6C5 1336 aa14.52□□□□□ -0.08
CAPN3-204ENST00000356316 ERVV-2B6SEH9 535 aa14.52□□□□□ -0.09
CAPN3-204ENST00000356316 PHF14O94880 888 aa14.52□□□□□ -0.09
CAPN3-204ENST00000356316 DCAF5Q96JK2 942 aa14.52□□□□□ -0.09
CAPN3-204ENST00000356316 ASAP1Q9ULH1 1129 aa14.52□□□□□ -0.09
CAPN3-204ENST00000356316 C4BP0C0L5 1744 aa14.52□□□□□ -0.09
CAPN3-204ENST00000356316 PLEKHG2Q9H7P9 1386 aa14.51□□□□□ -0.09
CAPN3-204ENST00000356316 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.51□□□□□ -0.09
CAPN3-204ENST00000356316 C1orf141Q5JVX7 400 aa14.51□□□□□ -0.09
CAPN3-204ENST00000356316 NLGN2Q8NFZ4 835 aa14.51□□□□□ -0.09
CAPN3-204ENST00000356316 GRIN3BO60391 1043 aa14.5□□□□□ -0.09
CAPN3-204ENST00000356316 SSFA2P28290 1259 aa14.5□□□□□ -0.09
CAPN3-204ENST00000356316 MTHFSP49914 203 aa14.5□□□□□ -0.09
CAPN3-204ENST00000356316 CABP4P57796 275 aa14.5□□□□□ -0.09
CAPN3-204ENST00000356316 ZNF530Q6P9A1 599 aaPredicted RBP14.5□□□□□ -0.09
CAPN3-204ENST00000356316 ZNF784Q8NCA9 323 aaPredicted RBP14.5□□□□□ -0.09
CAPN3-204ENST00000356316 ATG3Q9NT62 314 aa14.5□□□□□ -0.09
CAPN3-204ENST00000356316 CD2APQ9Y5K6 639 aa14.5□□□□□ -0.09
CAPN3-204ENST00000356316 GNPATO15228 680 aa14.49□□□□□ -0.09
CAPN3-204ENST00000356316 SULT6B1Q6IMI4 303 aa14.49□□□□□ -0.09
CAPN3-204ENST00000356316 LINC00116Q8NCU8 138 aa14.49□□□□□ -0.09
CAPN3-204ENST00000356316 RBM42Q9BTD8 480 aaKnown RBP14.49□□□□□ -0.09
CAPN3-204ENST00000356316 ITPK1Q13572 414 aa14.47□□□□□ -0.09
CAPN3-204ENST00000356316 UBR3Q6ZT12 1888 aa14.46□□□□□ -0.09
CAPN3-204ENST00000356316 KIF7Q2M1P5 1343 aa14.46□□□□□ -0.09
CAPN3-204ENST00000356316 TRAPPC3LQ5T215 181 aa14.46□□□□□ -0.09
CAPN3-204ENST00000356316 SMIM5Q71RC9 77 aa14.46□□□□□ -0.09
CAPN3-204ENST00000356316 AEBP1Q8IUX7 1158 aa14.46□□□□□ -0.09
CAPN3-204ENST00000356316 RTCBQ9Y3I0 505 aaKnown RBP14.46□□□□□ -0.09
CAPN3-204ENST00000356316 IL13P35225 146 aa14.45□□□□□ -0.1
CAPN3-204ENST00000356316 AMER1Q5JTC6 1135 aaPredicted RBP14.45□□□□□ -0.1
CAPN3-204ENST00000356316 SAMD1Q6SPF0 538 aaPredicted RBP14.45□□□□□ -0.1
CAPN3-204ENST00000356316 AMIGO3Q86WK7 504 aa14.44□□□□□ -0.1
CAPN3-204ENST00000356316 NFATC2IPQ8NCF5 419 aa14.44□□□□□ -0.1
CAPN3-204ENST00000356316 YBX3P16989 372 aaKnown RBP eCLIP14.43□□□□□ -0.1
CAPN3-204ENST00000356316 RFC4P35249 363 aa14.43□□□□□ -0.1
CAPN3-204ENST00000356316 CC2D1BQ5T0F9 858 aaKnown RBP14.43□□□□□ -0.1
CAPN3-204ENST00000356316 RC3H1Q5TC82 1133 aaKnown RBP14.43□□□□□ -0.1
CAPN3-204ENST00000356316 NLGN1Q8N2Q7 840 aa14.43□□□□□ -0.1
CAPN3-204ENST00000356316 PTCD1O75127 700 aaKnown RBP14.42□□□□□ -0.1
CAPN3-204ENST00000356316 AKAP4Q5JQC9 854 aa14.42□□□□□ -0.1
CAPN3-204ENST00000356316 DIAPH1O60610 1272 aaKnown RBP14.41□□□□□ -0.1
CAPN3-204ENST00000356316 CNGB1Q14028 1251 aaPredicted RBP14.41□□□□□ -0.1
CAPN3-204ENST00000356316 KDM6AO15550 1401 aaPredicted RBP14.41□□□□□ -0.1
CAPN3-204ENST00000356316 ZNF831Q5JPB2 1677 aa14.4□□□□□ -0.1
CAPN3-204ENST00000356316 KDRP35968 1356 aa14.4□□□□□ -0.1
CAPN3-204ENST00000356316 PER1O15534 1290 aaPredicted RBP14.4□□□□□ -0.1
CAPN3-204ENST00000356316 RPS6KA4O75676 772 aa14.4□□□□□ -0.1
CAPN3-204ENST00000356316 MMP10P09238 476 aa14.4□□□□□ -0.1
CAPN3-204ENST00000356316 HMOX1P09601 288 aa14.4□□□□□ -0.1
CAPN3-204ENST00000356316 ARHGEF1Q92888 912 aaKnown RBP14.4□□□□□ -0.1
CAPN3-204ENST00000356316 SLC4A9Q96Q91 983 aa14.4□□□□□ -0.1
CAPN3-204ENST00000356316 CNTNAP4Q9C0A0 1308 aa14.4□□□□□ -0.1
CAPN3-204ENST00000356316 GIGYF1O75420 1035 aaPredicted RBP14.38□□□□□ -0.11
CAPN3-204ENST00000356316 PARP3Q9Y6F1 533 aa14.38□□□□□ -0.11
CAPN3-204ENST00000356316 SCN11AQ9UI33 1791 aa14.37□□□□□ -0.11
CAPN3-204ENST00000356316 C1QTNF8P60827 252 aa14.37□□□□□ -0.11
CAPN3-204ENST00000356316 WWC3Q9ULE0 1092 aa14.37□□□□□ -0.11
CAPN3-204ENST00000356316 COL5A3P25940 1745 aaPredicted RBP14.36□□□□□ -0.11
CAPN3-204ENST00000356316 U2SURPO15042 1029 aaKnown RBP14.36□□□□□ -0.11
CAPN3-204ENST00000356316 CRKLP46109 303 aaKnown RBP14.36□□□□□ -0.11
CAPN3-204ENST00000356316 TGFB2P61812 414 aa14.36□□□□□ -0.11
CAPN3-204ENST00000356316 SLC52A2Q9HAB3 445 aa14.36□□□□□ -0.11
CAPN3-204ENST00000356316 LGR6Q9HBX8 967 aa14.36□□□□□ -0.11
CAPN3-204ENST00000356316 CCDC87Q9NVE4 849 aa14.36□□□□□ -0.11
CAPN3-204ENST00000356316 GYS1P13807 737 aa14.35□□□□□ -0.11
CAPN3-204ENST00000356316 MTHFSDQ2M296 383 aaKnown RBP14.35□□□□□ -0.11
CAPN3-204ENST00000356316 RNMTO43148 476 aaKnown RBP14.34□□□□□ -0.11
CAPN3-204ENST00000356316 SENP3-EIF4A1A0A087X0R7 540 aa14.33□□□□□ -0.12
CAPN3-204ENST00000356316 A0A0G2JLW4 131 aa14.33□□□□□ -0.12
CAPN3-204ENST00000356316 ZPR1O75312 459 aa14.33□□□□□ -0.12
CAPN3-204ENST00000356316 CFAP53Q96M91 514 aa14.33□□□□□ -0.12
CAPN3-204ENST00000356316 GPBP1L1Q9HC44 474 aaPredicted RBP14.33□□□□□ -0.12
CAPN3-204ENST00000356316 NPC1L1Q9UHC9 1359 aa14.33□□□□□ -0.12
CAPN3-204ENST00000356316 MYH14Q7Z406 1995 aaKnown RBP14.33□□□□□ -0.12
CAPN3-204ENST00000356316 VIRMAQ69YN4 1812 aaKnown RBP14.32□□□□□ -0.12
CAPN3-204ENST00000356316 CICQ96RK0 1608 aaPredicted RBP14.31□□□□□ -0.12
CAPN3-204ENST00000356316 SLC39A6Q13433 755 aa14.31□□□□□ -0.12
CAPN3-204ENST00000356316 INTS5Q6P9B9 1019 aaKnown RBP14.31□□□□□ -0.12
CAPN3-204ENST00000356316 DNAJC10Q8IXB1 793 aa14.31□□□□□ -0.12
CAPN3-204ENST00000356316 TTC5Q8N0Z6 440 aa14.31□□□□□ -0.12
CAPN3-204ENST00000356316 GAS2L2Q8NHY3 880 aa14.31□□□□□ -0.12
CAPN3-204ENST00000356316 BCS1LQ9Y276 419 aa14.31□□□□□ -0.12
CAPN3-204ENST00000356316 C4AP0C0L4 1744 aa14.3□□□□□ -0.12
CAPN3-204ENST00000356316 GNAT3A8MTJ3 354 aa14.3□□□□□ -0.12
CAPN3-204ENST00000356316 TEFQ10587 303 aa14.3□□□□□ -0.12
CAPN3-204ENST00000356316 ARHGAP27Q6ZUM4 889 aa14.3□□□□□ -0.12
CAPN3-204ENST00000356316 VSIG10Q8N0Z9 540 aa14.3□□□□□ -0.12
CAPN3-204ENST00000356316 ZNF526Q8TF50 670 aaPredicted RBP14.3□□□□□ -0.12
CAPN3-204ENST00000356316 SPINK5Q9NQ38 1064 aaPredicted RBP14.3□□□□□ -0.12
CAPN3-204ENST00000356316 SRP68Q9UHB9 627 aaKnown RBP14.3□□□□□ -0.12
CAPN3-204ENST00000356316 NUDCQ9Y266 331 aa14.3□□□□□ -0.12
CAPN3-204ENST00000356316 ATP10DQ9P241 1426 aa14.3□□□□□ -0.12
CAPN3-204ENST00000356316 TJP1Q07157 1748 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms