RNA–Protein interactions for RNA: ENST00000356020.2

LINC01565-201, Transcript of long intergenic non-protein coding RNA 1565, humanhuman

TSL 2 BASIC

Gene LINC01565, Length 2,697 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01565-201ENST00000356020 PKNOX2Q96KN3 472 aa19.13■□□□□ 0.65
LINC01565-201ENST00000356020 CCDC173Q0VFZ6 552 aa19.13■□□□□ 0.65
LINC01565-201ENST00000356020 CACNA1FO60840 1977 aa19.13■□□□□ 0.65
LINC01565-201ENST00000356020 DIP2AQ14689 1571 aa19.12■□□□□ 0.65
LINC01565-201ENST00000356020 RGPD8O14715 1765 aaPredicted RBP19.12■□□□□ 0.65
LINC01565-201ENST00000356020 STK31Q9BXU1 1019 aa19.12■□□□□ 0.65
LINC01565-201ENST00000356020 SALL3Q9BXA9 1300 aa19.11■□□□□ 0.65
LINC01565-201ENST00000356020 HTATSF1O43719 755 aaKnown RBP19.11■□□□□ 0.65
LINC01565-201ENST00000356020 MCTP1Q6DN14 999 aa19.11■□□□□ 0.65
LINC01565-201ENST00000356020 EYA1Q99502 592 aa19.11■□□□□ 0.65
LINC01565-201ENST00000356020 AMPHP49418 695 aa19.1■□□□□ 0.65
LINC01565-201ENST00000356020 PPP1R9BQ96SB3 815 aa19.1■□□□□ 0.65
LINC01565-201ENST00000356020 GNAI3P08754 354 aa19.09■□□□□ 0.65
LINC01565-201ENST00000356020 PKP1Q13835 747 aa19.09■□□□□ 0.65
LINC01565-201ENST00000356020 LMBRD1Q9NUN5 540 aa19.09■□□□□ 0.65
LINC01565-201ENST00000356020 EXOC6BQ9Y2D4 811 aa19.09■□□□□ 0.65
LINC01565-201ENST00000356020 ZNF445P59923 1031 aa19.08■□□□□ 0.65
LINC01565-201ENST00000356020 FLIIQ13045 1269 aa19.08■□□□□ 0.65
LINC01565-201ENST00000356020 ZGPATQ8N5A5 531 aaKnown RBP19.08■□□□□ 0.65
LINC01565-201ENST00000356020 SLC26A8Q96RN1 970 aa19.08■□□□□ 0.65
LINC01565-201ENST00000356020 PXDNLA1KZ92 1463 aa19.08■□□□□ 0.64
LINC01565-201ENST00000356020 NASPP49321 788 aaPredicted RBP19.08■□□□□ 0.64
LINC01565-201ENST00000356020 CCDC30Q5VVM6 783 aa19.08■□□□□ 0.64
LINC01565-201ENST00000356020 SLIT1O75093 1534 aa19.08■□□□□ 0.64
LINC01565-201ENST00000356020 SOS1Q07889 1333 aaPredicted RBP19.08■□□□□ 0.64
LINC01565-201ENST00000356020 VSIG10Q8N0Z9 540 aa19.08■□□□□ 0.64
LINC01565-201ENST00000356020 ANP32BQ92688 251 aaKnown RBP19.08■□□□□ 0.64
LINC01565-201ENST00000356020 LRRCC1Q9C099 1032 aa19.08■□□□□ 0.64
LINC01565-201ENST00000356020 USP54Q70EL1 1684 aa19.07■□□□□ 0.64
LINC01565-201ENST00000356020 NGDNQ8NEJ9 315 aaKnown RBP19.07■□□□□ 0.64
LINC01565-201ENST00000356020 AMOTL2Q9Y2J4 779 aa19.07■□□□□ 0.64
LINC01565-201ENST00000356020 MARF1Q9Y4F3 1742 aaKnown RBP19.07■□□□□ 0.64
LINC01565-201ENST00000356020 ARHGAP23Q9P227 1491 aa19.07■□□□□ 0.64
LINC01565-201ENST00000356020 EID1Q9Y6B2 187 aa19.07■□□□□ 0.64
LINC01565-201ENST00000356020 NWD1Q149M9 1564 aa19.06■□□□□ 0.64
LINC01565-201ENST00000356020 FKBP5Q13451 457 aaPredicted RBP19.06■□□□□ 0.64
LINC01565-201ENST00000356020 ESYT1Q9BSJ8 1104 aa19.06■□□□□ 0.64
LINC01565-201ENST00000356020 MX1P20591 662 aa19.06■□□□□ 0.64
LINC01565-201ENST00000356020 ATP8B2P98198 1209 aa19.06■□□□□ 0.64
LINC01565-201ENST00000356020 GNAT3A8MTJ3 354 aa19.05■□□□□ 0.64
LINC01565-201ENST00000356020 ZDHHC9Q9Y397 364 aa19.05■□□□□ 0.64
LINC01565-201ENST00000356020 MCM2P49736 904 aa19.04■□□□□ 0.64
LINC01565-201ENST00000356020 CAVIN1Q6NZI2 390 aaKnown RBP19.04■□□□□ 0.64
LINC01565-201ENST00000356020 ZSCAN30Q86W11 494 aa19.04■□□□□ 0.64
LINC01565-201ENST00000356020 TBX22Q9Y458 520 aa19.04■□□□□ 0.64
LINC01565-201ENST00000356020 PNMA6EA0A0J9YXQ4 647 aa19.04■□□□□ 0.64
LINC01565-201ENST00000356020 MCCP23508 829 aa19.04■□□□□ 0.64
LINC01565-201ENST00000356020 TERF1P54274 439 aa19.04■□□□□ 0.64
LINC01565-201ENST00000356020 MAP3K5Q99683 1374 aa19.04■□□□□ 0.64
LINC01565-201ENST00000356020 ZSCAN23Q3MJ62 389 aa19.03■□□□□ 0.64
LINC01565-201ENST00000356020 TSHZ3Q63HK5 1081 aa19.03■□□□□ 0.64
LINC01565-201ENST00000356020 BABAM1Q9NWV8 329 aa19.03■□□□□ 0.64
LINC01565-201ENST00000356020 STAP2Q9UGK3 403 aa19.03■□□□□ 0.64
LINC01565-201ENST00000356020 ANKARQ7Z5J8 1434 aa19.02■□□□□ 0.64
LINC01565-201ENST00000356020 NEK4P51957 841 aa19.02■□□□□ 0.64
LINC01565-201ENST00000356020 ANAPC15P60006 121 aa19.02■□□□□ 0.64
LINC01565-201ENST00000356020 SRCIN1Q9C0H9 1055 aa19.02■□□□□ 0.64
LINC01565-201ENST00000356020 ZMYND15Q9H091 742 aa19.02■□□□□ 0.64
LINC01565-201ENST00000356020 PDCL3Q9H2J4 239 aa19.02■□□□□ 0.64
LINC01565-201ENST00000356020 NCLP19338 710 aaKnown RBP19.02■□□□□ 0.63
LINC01565-201ENST00000356020 TMX3Q96JJ7 454 aa19.02■□□□□ 0.63
LINC01565-201ENST00000356020 AOX1Q06278 1338 aa19.02■□□□□ 0.63
LINC01565-201ENST00000356020 HOXC9P31274 260 aa19.01■□□□□ 0.63
LINC01565-201ENST00000356020 CHMLP26374 656 aa19.01■□□□□ 0.63
LINC01565-201ENST00000356020 HS1BP3Q53T59 392 aa19.01■□□□□ 0.63
LINC01565-201ENST00000356020 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.01■□□□□ 0.63
LINC01565-201ENST00000356020 LRRFIP2Q9Y608 721 aaKnown RBP19.01■□□□□ 0.63
LINC01565-201ENST00000356020 NLRP6P59044 892 aa19■□□□□ 0.63
LINC01565-201ENST00000356020 PRPF40AO75400 957 aaKnown RBP19■□□□□ 0.63
LINC01565-201ENST00000356020 CUL4AQ13619 759 aa19■□□□□ 0.63
LINC01565-201ENST00000356020 IL17RAQ96F46 866 aa19■□□□□ 0.63
LINC01565-201ENST00000356020 OFD1O75665 1012 aa18.99■□□□□ 0.63
LINC01565-201ENST00000356020 NECTIN2Q92692 538 aa18.99■□□□□ 0.63
LINC01565-201ENST00000356020 TRIM6-TRIM34B2RNG4 842 aa18.99■□□□□ 0.63
LINC01565-201ENST00000356020 IL17REQ8NFR9 667 aa18.99■□□□□ 0.63
LINC01565-201ENST00000356020 GPT2Q8TD30 523 aa18.99■□□□□ 0.63
LINC01565-201ENST00000356020 MSNP26038 577 aaKnown RBP18.98■□□□□ 0.63
LINC01565-201ENST00000356020 TAF7Q15545 349 aaPredicted RBP18.98■□□□□ 0.63
LINC01565-201ENST00000356020 KIAA1211Q6ZU35 1233 aa18.98■□□□□ 0.63
LINC01565-201ENST00000356020 RILPL2Q969X0 211 aa18.98■□□□□ 0.63
LINC01565-201ENST00000356020 ANO2Q9NQ90 1003 aa18.98■□□□□ 0.63
LINC01565-201ENST00000356020 PALD1Q9ULE6 856 aa18.98■□□□□ 0.63
LINC01565-201ENST00000356020 USP44Q9H0E7 712 aa18.97■□□□□ 0.63
LINC01565-201ENST00000356020 EPB41L2O43491 1005 aaKnown RBP18.97■□□□□ 0.63
LINC01565-201ENST00000356020 UBTFL1P0CB47 393 aaPredicted RBP18.97■□□□□ 0.63
LINC01565-201ENST00000356020 INTS4Q96HW7 963 aaKnown RBP18.97■□□□□ 0.63
LINC01565-201ENST00000356020 BRD1O95696 1058 aa18.97■□□□□ 0.63
LINC01565-201ENST00000356020 CEBPAP49715 358 aaPredicted RBP18.97■□□□□ 0.63
LINC01565-201ENST00000356020 SSH3Q8TE77 659 aa18.96■□□□□ 0.63
LINC01565-201ENST00000356020 HDGFL1Q5TGJ6 251 aa18.95■□□□□ 0.62
LINC01565-201ENST00000356020 RBSNQ9H1K0 784 aa18.95■□□□□ 0.62
LINC01565-201ENST00000356020 RBM27Q9P2N5 1060 aaKnown RBP18.95■□□□□ 0.62
LINC01565-201ENST00000356020 MED1Q15648 1581 aaPredicted RBP18.95■□□□□ 0.62
LINC01565-201ENST00000356020 LTN1O94822 1766 aa18.95■□□□□ 0.62
LINC01565-201ENST00000356020 MBD3O95983 291 aa18.95■□□□□ 0.62
LINC01565-201ENST00000356020 UNC5CLQ8IV45 518 aa18.95■□□□□ 0.62
LINC01565-201ENST00000356020 RAB11FIP3O75154 756 aa18.94■□□□□ 0.62
LINC01565-201ENST00000356020 PRIM1P49642 420 aaKnown RBP18.94■□□□□ 0.62
LINC01565-201ENST00000356020 TMEM63CQ9P1W3 806 aa18.93■□□□□ 0.62
LINC01565-201ENST00000356020 KDM3BQ7LBC6 1761 aa18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms