RNA–Protein interactions for RNA: ENST00000356017.8

TRIM13-201, Transcript of tripartite motif containing 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRIM13, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-201ENST00000356017 PLSCR1O15162 318 aa20.35■□□□□ 0.85
TRIM13-201ENST00000356017 BAG6P46379 1132 aa20.35■□□□□ 0.85
TRIM13-201ENST00000356017 TAF7Q15545 349 aaPredicted RBP20.35■□□□□ 0.85
TRIM13-201ENST00000356017 KAT6BQ8WYB5 2073 aa20.35■□□□□ 0.85
TRIM13-201ENST00000356017 WWC1Q8IX03 1113 aa20.34■□□□□ 0.85
TRIM13-201ENST00000356017 THUMPD2Q9BTF0 503 aaKnown RBP20.34■□□□□ 0.85
TRIM13-201ENST00000356017 BTBD11A6QL63 1104 aa20.33■□□□□ 0.84
TRIM13-201ENST00000356017 SALL2Q9Y467 1007 aaPredicted RBP20.33■□□□□ 0.84
TRIM13-201ENST00000356017 ITGB4P16144 1822 aa20.33■□□□□ 0.84
TRIM13-201ENST00000356017 SENP3-EIF4A1A0A087X0R7 540 aa20.32■□□□□ 0.84
TRIM13-201ENST00000356017 ATG3Q9NT62 314 aa20.32■□□□□ 0.84
TRIM13-201ENST00000356017 BABAM1Q9NWV8 329 aa20.32■□□□□ 0.84
TRIM13-201ENST00000356017 ASAP1Q9ULH1 1129 aa20.32■□□□□ 0.84
TRIM13-201ENST00000356017 TTC5Q8N0Z6 440 aa20.31■□□□□ 0.84
TRIM13-201ENST00000356017 PALLDQ8WX93 1383 aa20.3■□□□□ 0.84
TRIM13-201ENST00000356017 BTAF1O14981 1849 aa20.3■□□□□ 0.84
TRIM13-201ENST00000356017 ZNF790Q6PG37 636 aa20.3■□□□□ 0.84
TRIM13-201ENST00000356017 WDR63Q8IWG1 891 aa20.3■□□□□ 0.84
TRIM13-201ENST00000356017 TNS1Q9HBL0 1735 aaKnown RBP20.3■□□□□ 0.84
TRIM13-201ENST00000356017 SOCS7O14512 581 aa20.29■□□□□ 0.84
TRIM13-201ENST00000356017 VIRMAQ69YN4 1812 aaKnown RBP20.29■□□□□ 0.84
TRIM13-201ENST00000356017 HMGB2P26583 209 aaKnown RBP20.28■□□□□ 0.84
TRIM13-201ENST00000356017 CFAP44Q96MT7 982 aa20.28■□□□□ 0.84
TRIM13-201ENST00000356017 GNAI1P63096 354 aa20.27■□□□□ 0.84
TRIM13-201ENST00000356017 HNRNPUQ00839 825 aaKnown RBP eCLIP20.27■□□□□ 0.84
TRIM13-201ENST00000356017 EN1Q05925 392 aaPredicted RBP20.27■□□□□ 0.84
TRIM13-201ENST00000356017 SLC39A6Q13433 755 aa20.27■□□□□ 0.84
TRIM13-201ENST00000356017 CAMKK2Q96RR4 588 aa20.27■□□□□ 0.84
TRIM13-201ENST00000356017 IFT57Q9NWB7 429 aa20.27■□□□□ 0.84
TRIM13-201ENST00000356017 IL16Q14005 1332 aa20.27■□□□□ 0.84
TRIM13-201ENST00000356017 SLC27A3Q5K4L6 730 aa20.27■□□□□ 0.83
TRIM13-201ENST00000356017 DEFB132Q7Z7B7 95 aa20.27■□□□□ 0.83
TRIM13-201ENST00000356017 TSPYL4Q9UJ04 414 aa20.27■□□□□ 0.83
TRIM13-201ENST00000356017 SIPA1L3O60292 1781 aaPredicted RBP20.26■□□□□ 0.83
TRIM13-201ENST00000356017 CHL1O00533 1208 aa20.26■□□□□ 0.83
TRIM13-201ENST00000356017 MIS18AQ9NYP9 233 aa20.26■□□□□ 0.83
TRIM13-201ENST00000356017 LAS1LQ9Y4W2 734 aaKnown RBP20.26■□□□□ 0.83
TRIM13-201ENST00000356017 LOC102724428A0A0B4J2F2 783 aa20.25■□□□□ 0.83
TRIM13-201ENST00000356017 PTCD1O75127 700 aaKnown RBP20.25■□□□□ 0.83
TRIM13-201ENST00000356017 SIK1P57059 783 aa20.25■□□□□ 0.83
TRIM13-201ENST00000356017 TXNRD1Q16881 649 aa20.25■□□□□ 0.83
TRIM13-201ENST00000356017 RBM42Q9BTD8 480 aaKnown RBP20.25■□□□□ 0.83
TRIM13-201ENST00000356017 ZNF853P0CG23 659 aa20.24■□□□□ 0.83
TRIM13-201ENST00000356017 EZH2Q15910 746 aaKnown RBP20.24■□□□□ 0.83
TRIM13-201ENST00000356017 FMNL2Q96PY5 1086 aa20.24■□□□□ 0.83
TRIM13-201ENST00000356017 CCNL1Q9UK58 526 aaPredicted RBP20.24■□□□□ 0.83
TRIM13-201ENST00000356017 ZNF521Q96K83 1311 aa20.24■□□□□ 0.83
TRIM13-201ENST00000356017 RGPD3A6NKT7 1758 aaPredicted RBP20.24■□□□□ 0.83
TRIM13-201ENST00000356017 RGPD4Q7Z3J3 1758 aa20.24■□□□□ 0.83
TRIM13-201ENST00000356017 VSIG10Q8N0Z9 540 aa20.24■□□□□ 0.83
TRIM13-201ENST00000356017 PROM2Q8N271 834 aa20.23■□□□□ 0.83
TRIM13-201ENST00000356017 ATP6V1AP38606 617 aa20.22■□□□□ 0.83
TRIM13-201ENST00000356017 GOLGA2Q08379 1002 aa20.22■□□□□ 0.83
TRIM13-201ENST00000356017 ZNF496Q96IT1 587 aaPredicted RBP20.22■□□□□ 0.83
TRIM13-201ENST00000356017 PAPPAQ13219 1627 aa20.22■□□□□ 0.83
TRIM13-201ENST00000356017 KCNQ3O43525 872 aa20.21■□□□□ 0.83
TRIM13-201ENST00000356017 MBIPQ9NS73 344 aa20.21■□□□□ 0.83
TRIM13-201ENST00000356017 TEX13AQ9BXU3 409 aaPredicted RBP20.2■□□□□ 0.82
TRIM13-201ENST00000356017 MYH16Q9H6N6 1097 aa20.2■□□□□ 0.82
TRIM13-201ENST00000356017 HEG1Q9ULI3 1381 aa20.2■□□□□ 0.82
TRIM13-201ENST00000356017 EIF4A1P60842 406 aaKnown RBP20.2■□□□□ 0.82
TRIM13-201ENST00000356017 LY75O60449 1722 aa20.19■□□□□ 0.82
TRIM13-201ENST00000356017 KCPQ6ZWJ8 1503 aa20.19■□□□□ 0.82
TRIM13-201ENST00000356017 LRRC4BQ9NT99 713 aa20.19■□□□□ 0.82
TRIM13-201ENST00000356017 ZBED9Q6R2W3 1325 aa20.18■□□□□ 0.82
TRIM13-201ENST00000356017 E9PSI1 815 aa20.18■□□□□ 0.82
TRIM13-201ENST00000356017 SNRPA1P09661 255 aaKnown RBP20.18■□□□□ 0.82
TRIM13-201ENST00000356017 SLC4A9Q96Q91 983 aa20.18■□□□□ 0.82
TRIM13-201ENST00000356017 UBR2Q8IWV8 1755 aa20.17■□□□□ 0.82
TRIM13-201ENST00000356017 KDM3BQ7LBC6 1761 aa20.17■□□□□ 0.82
TRIM13-201ENST00000356017 KCNQ4P56696 695 aa20.16■□□□□ 0.82
TRIM13-201ENST00000356017 ZNF831Q5JPB2 1677 aa20.16■□□□□ 0.82
TRIM13-201ENST00000356017 STARD3NLO95772 234 aa20.16■□□□□ 0.82
TRIM13-201ENST00000356017 ITPK1Q13572 414 aa20.16■□□□□ 0.82
TRIM13-201ENST00000356017 GIGYF1O75420 1035 aaPredicted RBP20.15■□□□□ 0.82
TRIM13-201ENST00000356017 NBPF14Q5TI25 921 aa20.15■□□□□ 0.82
TRIM13-201ENST00000356017 TSR2Q969E8 191 aaKnown RBP20.15■□□□□ 0.82
TRIM13-201ENST00000356017 FANCIQ9NVI1 1328 aa20.14■□□□□ 0.82
TRIM13-201ENST00000356017 DNAJC10Q8IXB1 793 aa20.14■□□□□ 0.81
TRIM13-201ENST00000356017 SPINK5Q9NQ38 1064 aaPredicted RBP20.14■□□□□ 0.81
TRIM13-201ENST00000356017 HOXB7P09629 217 aa20.13■□□□□ 0.81
TRIM13-201ENST00000356017 SLFN5Q08AF3 891 aa20.13■□□□□ 0.81
TRIM13-201ENST00000356017 LINC00116Q8NCU8 138 aa20.13■□□□□ 0.81
TRIM13-201ENST00000356017 CHMP4AQ9BY43 222 aa20.13■□□□□ 0.81
TRIM13-201ENST00000356017 RREB1Q92766 1687 aa20.12■□□□□ 0.81
TRIM13-201ENST00000356017 SOS1Q07889 1333 aaPredicted RBP20.12■□□□□ 0.81
TRIM13-201ENST00000356017 CYP19A1P11511 503 aaPredicted RBP20.12■□□□□ 0.81
TRIM13-201ENST00000356017 RC3H1Q5TC82 1133 aaKnown RBP20.12■□□□□ 0.81
TRIM13-201ENST00000356017 CICQ96RK0 1608 aaPredicted RBP20.11■□□□□ 0.81
TRIM13-201ENST00000356017 CDCA7LQ96GN5 454 aa20.11■□□□□ 0.81
TRIM13-201ENST00000356017 USP16Q9Y5T5 823 aa20.11■□□□□ 0.81
TRIM13-201ENST00000356017 CNTNAP4Q9C0A0 1308 aa20.11■□□□□ 0.81
TRIM13-201ENST00000356017 DUSP27Q5VZP5 1158 aa20.1■□□□□ 0.81
TRIM13-201ENST00000356017 AK7Q96M32 723 aa20.1■□□□□ 0.81
TRIM13-201ENST00000356017 STK32BQ9NY57 414 aa20.1■□□□□ 0.81
TRIM13-201ENST00000356017 PRAMEF22A3QJZ6 481 aa20.09■□□□□ 0.81
TRIM13-201ENST00000356017 CRKLP46109 303 aaKnown RBP20.09■□□□□ 0.81
TRIM13-201ENST00000356017 TRMT2AQ8IZ69 625 aaKnown RBP20.09■□□□□ 0.81
TRIM13-201ENST00000356017 SLC15A2Q16348 729 aa20.09■□□□□ 0.81
TRIM13-201ENST00000356017 KRT24Q2M2I5 525 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms