RNA–Protein interactions for RNA: ENST00000355947.6

TRIM4-203, Transcript of tripartite motif containing 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRIM4, Length 3,383 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-203ENST00000355947 CEBPZQ03701 1054 aaKnown RBP16.37■□□□□ 0.21
TRIM4-203ENST00000355947 STK3Q13188 491 aa16.37■□□□□ 0.21
TRIM4-203ENST00000355947 CCDC94Q9BW85 323 aaPredicted RBP16.37■□□□□ 0.21
TRIM4-203ENST00000355947 IL25Q9H293 177 aa16.37■□□□□ 0.21
TRIM4-203ENST00000355947 ZFYVE16Q7Z3T8 1539 aa16.36■□□□□ 0.21
TRIM4-203ENST00000355947 CLEC17AQ6ZS10 378 aa16.36■□□□□ 0.21
TRIM4-203ENST00000355947 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.36■□□□□ 0.21
TRIM4-203ENST00000355947 PRDM4Q9UKN5 801 aa16.36■□□□□ 0.21
TRIM4-203ENST00000355947 V9GYY5 206 aaPredicted RBP16.36■□□□□ 0.21
TRIM4-203ENST00000355947 QRICH2Q9H0J4 1663 aa16.36■□□□□ 0.21
TRIM4-203ENST00000355947 CASTP20810 708 aaKnown RBP16.36■□□□□ 0.21
TRIM4-203ENST00000355947 CHMLP26374 656 aa16.36■□□□□ 0.21
TRIM4-203ENST00000355947 TFIP11Q9UBB9 837 aaKnown RBP16.36■□□□□ 0.21
TRIM4-203ENST00000355947 PYCARDQ9ULZ3 195 aa16.36■□□□□ 0.21
TRIM4-203ENST00000355947 MYOM2P54296 1465 aa16.36■□□□□ 0.21
TRIM4-203ENST00000355947 RTL1A6NKG5 1358 aa16.36■□□□□ 0.21
TRIM4-203ENST00000355947 ATP2B3Q16720 1220 aa16.35■□□□□ 0.21
TRIM4-203ENST00000355947 CCDC183Q5T5S1 534 aa16.35■□□□□ 0.21
TRIM4-203ENST00000355947 MYRIPQ8NFW9 859 aa16.35■□□□□ 0.21
TRIM4-203ENST00000355947 CFAP74Q9C0B2 1584 aa16.35■□□□□ 0.21
TRIM4-203ENST00000355947 TULP4Q9NRJ4 1543 aa16.35■□□□□ 0.21
TRIM4-203ENST00000355947 ANXA1P04083 346 aa16.35■□□□□ 0.21
TRIM4-203ENST00000355947 BCL2L12Q9HB09 334 aa16.35■□□□□ 0.21
TRIM4-203ENST00000355947 MCM5P33992 734 aa16.34■□□□□ 0.21
TRIM4-203ENST00000355947 CYB5RLQ6IPT4 315 aa16.34■□□□□ 0.21
TRIM4-203ENST00000355947 MTERF4Q7Z6M4 381 aaKnown RBP16.34■□□□□ 0.21
TRIM4-203ENST00000355947 KIF1BO60333 1816 aa16.34■□□□□ 0.21
TRIM4-203ENST00000355947 RPGRIP1LQ68CZ1 1315 aa16.34■□□□□ 0.21
TRIM4-203ENST00000355947 RIOK3O14730 519 aaKnown RBP16.34■□□□□ 0.21
TRIM4-203ENST00000355947 PTGS1P23219 599 aa16.34■□□□□ 0.21
TRIM4-203ENST00000355947 TRIM5Q9C035 493 aa16.33■□□□□ 0.2
TRIM4-203ENST00000355947 LRRC7Q96NW7 1537 aa16.33■□□□□ 0.2
TRIM4-203ENST00000355947 STX6O43752 255 aa16.33■□□□□ 0.2
TRIM4-203ENST00000355947 SYT1P21579 422 aa16.33■□□□□ 0.2
TRIM4-203ENST00000355947 AK2P54819 239 aa16.33■□□□□ 0.2
TRIM4-203ENST00000355947 HMGN5P82970 282 aaKnown RBP16.33■□□□□ 0.2
TRIM4-203ENST00000355947 NAA30Q147X3 362 aaPredicted RBP16.33■□□□□ 0.2
TRIM4-203ENST00000355947 JAKMIP1Q96N16 626 aaKnown RBP16.33■□□□□ 0.2
TRIM4-203ENST00000355947 RIMS2Q9UQ26 1411 aa16.33■□□□□ 0.2
TRIM4-203ENST00000355947 UBTFL1P0CB47 393 aaPredicted RBP16.32■□□□□ 0.2
TRIM4-203ENST00000355947 MCM2P49736 904 aa16.32■□□□□ 0.2
TRIM4-203ENST00000355947 DIAPH3Q9NSV4 1193 aa16.32■□□□□ 0.2
TRIM4-203ENST00000355947 LRMPQ12912 555 aa16.32■□□□□ 0.2
TRIM4-203ENST00000355947 EIF4A2Q14240 407 aaKnown RBP16.32■□□□□ 0.2
TRIM4-203ENST00000355947 LUZP1Q86V48 1076 aa16.32■□□□□ 0.2
TRIM4-203ENST00000355947 PIBF1Q8WXW3 757 aa16.32■□□□□ 0.2
TRIM4-203ENST00000355947 TET3O43151 1660 aa16.32■□□□□ 0.2
TRIM4-203ENST00000355947 PRPF40BQ6NWY9 871 aaKnown RBP16.32■□□□□ 0.2
TRIM4-203ENST00000355947 NUDT16Q96DE0 195 aaKnown RBP16.32■□□□□ 0.2
TRIM4-203ENST00000355947 ZNF853P0CG23 659 aa16.31■□□□□ 0.2
TRIM4-203ENST00000355947 HAP1P54257 671 aaPredicted RBP16.31■□□□□ 0.2
TRIM4-203ENST00000355947 ZNF710Q8N1W2 664 aa16.31■□□□□ 0.2
TRIM4-203ENST00000355947 GJB2P29033 226 aa16.31■□□□□ 0.2
TRIM4-203ENST00000355947 TERF1P54274 439 aa16.31■□□□□ 0.2
TRIM4-203ENST00000355947 MROH2AA6NES4 1674 aa16.31■□□□□ 0.2
TRIM4-203ENST00000355947 AMPHP49418 695 aa16.3■□□□□ 0.2
TRIM4-203ENST00000355947 SMAP1Q8IYB5 467 aaPredicted RBP16.3■□□□□ 0.2
TRIM4-203ENST00000355947 ZBTB9Q96C00 473 aa16.3■□□□□ 0.2
TRIM4-203ENST00000355947 PTCH1Q13635 1447 aa16.3■□□□□ 0.2
TRIM4-203ENST00000355947 SRGAP3O43295 1099 aa16.3■□□□□ 0.2
TRIM4-203ENST00000355947 RASEFQ8IZ41 740 aa16.3■□□□□ 0.2
TRIM4-203ENST00000355947 LARGE1O95461 756 aa16.3■□□□□ 0.2
TRIM4-203ENST00000355947 ZSCAN22P10073 491 aaPredicted RBP16.3■□□□□ 0.2
TRIM4-203ENST00000355947 BICD2Q8TD16 824 aa16.3■□□□□ 0.2
TRIM4-203ENST00000355947 YTHDC2Q9H6S0 1430 aaKnown RBP16.3■□□□□ 0.2
TRIM4-203ENST00000355947 CCDC186Q7Z3E2 898 aa16.29■□□□□ 0.2
TRIM4-203ENST00000355947 KDM4AO75164 1064 aa16.29■□□□□ 0.2
TRIM4-203ENST00000355947 FLIIQ13045 1269 aa16.29■□□□□ 0.2
TRIM4-203ENST00000355947 CGNQ9P2M7 1197 aaKnown RBP16.29■□□□□ 0.2
TRIM4-203ENST00000355947 FAM135BQ49AJ0 1406 aa16.28■□□□□ 0.2
TRIM4-203ENST00000355947 A0A087WWV3 80 aa16.28■□□□□ 0.2
TRIM4-203ENST00000355947 GOLGA6L6A8MZA4 724 aa16.28■□□□□ 0.2
TRIM4-203ENST00000355947 CCT4P50991 539 aaKnown RBP16.28■□□□□ 0.2
TRIM4-203ENST00000355947 FGD1P98174 961 aa16.28■□□□□ 0.2
TRIM4-203ENST00000355947 TRERF1Q96PN7 1200 aa16.28■□□□□ 0.2
TRIM4-203ENST00000355947 NRBP1Q9UHY1 535 aa16.28■□□□□ 0.2
TRIM4-203ENST00000355947 TPD52L1Q16890 204 aaPredicted RBP16.27■□□□□ 0.2
TRIM4-203ENST00000355947 LARP1BQ659C4 914 aaKnown RBP16.27■□□□□ 0.2
TRIM4-203ENST00000355947 FAM184AQ8NB25 1140 aa16.27■□□□□ 0.2
TRIM4-203ENST00000355947 SYTL4Q96C24 671 aaPredicted RBP16.27■□□□□ 0.2
TRIM4-203ENST00000355947 TRMT1Q9NXH9 659 aaKnown RBP16.27■□□□□ 0.2
TRIM4-203ENST00000355947 ERICH4A6NGS2 130 aa16.27■□□□□ 0.19
TRIM4-203ENST00000355947 USHBP1Q8N6Y0 703 aa16.27■□□□□ 0.19
TRIM4-203ENST00000355947 F13A1P00488 732 aa16.26■□□□□ 0.19
TRIM4-203ENST00000355947 BRPF1P55201 1214 aaPredicted RBP16.26■□□□□ 0.19
TRIM4-203ENST00000355947 UBE2HP62256 183 aa16.26■□□□□ 0.19
TRIM4-203ENST00000355947 NCBP3Q53F19 620 aaKnown RBP16.26■□□□□ 0.19
TRIM4-203ENST00000355947 PPP1R42Q7Z4L9 355 aa16.26■□□□□ 0.19
TRIM4-203ENST00000355947 FILIP1Q7Z7B0 1213 aa16.26■□□□□ 0.19
TRIM4-203ENST00000355947 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.26■□□□□ 0.19
TRIM4-203ENST00000355947 MED14O60244 1454 aa16.26■□□□□ 0.19
TRIM4-203ENST00000355947 GNAI3P08754 354 aa16.26■□□□□ 0.19
TRIM4-203ENST00000355947 CCDC192P0DO97 292 aa16.26■□□□□ 0.19
TRIM4-203ENST00000355947 PRIMPOLQ96LW4 560 aa16.26■□□□□ 0.19
TRIM4-203ENST00000355947 AP5Z1O43299 807 aa16.26■□□□□ 0.19
TRIM4-203ENST00000355947 MTHFSDQ2M296 383 aaKnown RBP16.26■□□□□ 0.19
TRIM4-203ENST00000355947 PHAXQ9H814 394 aaKnown RBP16.26■□□□□ 0.19
TRIM4-203ENST00000355947 PDRG1Q9NUG6 133 aa16.26■□□□□ 0.19
TRIM4-203ENST00000355947 LIMCH1Q9UPQ0 1083 aa16.25■□□□□ 0.19
TRIM4-203ENST00000355947 ATP6V1DQ9Y5K8 247 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms