RNA–Protein interactions for RNA: ENST00000355396.7

SUSD1-201, Transcript of sushi domain containing 1, humanhuman

APPRIS ALT2 TSL 2

Gene SUSD1, Length 2,861 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUSD1-201ENST00000355396 WDR63Q8IWG1 891 aa15.18■□□□□ 0.02
SUSD1-201ENST00000355396 CICQ96RK0 1608 aaPredicted RBP15.17■□□□□ 0.02
SUSD1-201ENST00000355396 DCTN1Q14203 1278 aa15.17■□□□□ 0.02
SUSD1-201ENST00000355396 ZNF853P0CG23 659 aa15.17■□□□□ 0.02
SUSD1-201ENST00000355396 PRIM1P49642 420 aaKnown RBP15.17■□□□□ 0.02
SUSD1-201ENST00000355396 NEUROD2Q15784 382 aa15.17■□□□□ 0.02
SUSD1-201ENST00000355396 CALD1Q05682 793 aaKnown RBP15.16■□□□□ 0.02
SUSD1-201ENST00000355396 CABP4P57796 275 aa15.16■□□□□ 0.02
SUSD1-201ENST00000355396 PIGBQ92521 554 aa15.16■□□□□ 0.02
SUSD1-201ENST00000355396 LY75O60449 1722 aa15.16■□□□□ 0.02
SUSD1-201ENST00000355396 KCNQ2O43526 872 aa15.15■□□□□ 0.02
SUSD1-201ENST00000355396 TAF7Q15545 349 aaPredicted RBP15.15■□□□□ 0.02
SUSD1-201ENST00000355396 NFATC2IPQ8NCF5 419 aa15.15■□□□□ 0.02
SUSD1-201ENST00000355396 TMOD3Q9NYL9 352 aa15.15■□□□□ 0.02
SUSD1-201ENST00000355396 TEFQ10587 303 aa15.14■□□□□ 0.01
SUSD1-201ENST00000355396 CCDC125Q86Z20 511 aa15.14■□□□□ 0.01
SUSD1-201ENST00000355396 THUMPD2Q9BTF0 503 aaKnown RBP15.14■□□□□ 0.01
SUSD1-201ENST00000355396 CHL1O00533 1208 aa15.14■□□□□ 0.01
SUSD1-201ENST00000355396 ACSBG1Q96GR2 724 aa15.14■□□□□ 0.01
SUSD1-201ENST00000355396 ZBED9Q6R2W3 1325 aa15.14■□□□□ 0.01
SUSD1-201ENST00000355396 CFAP44Q96MT7 982 aa15.14■□□□□ 0.01
SUSD1-201ENST00000355396 IFT57Q9NWB7 429 aa15.14■□□□□ 0.01
SUSD1-201ENST00000355396 KCPQ6ZWJ8 1503 aa15.14■□□□□ 0.01
SUSD1-201ENST00000355396 PTF1AQ7RTS3 328 aa15.13■□□□□ 0.01
SUSD1-201ENST00000355396 HEG1Q9ULI3 1381 aa15.12■□□□□ 0.01
SUSD1-201ENST00000355396 PLSCR1O15162 318 aa15.12■□□□□ 0.01
SUSD1-201ENST00000355396 TRIM37O94972 964 aa15.12■□□□□ 0.01
SUSD1-201ENST00000355396 ATG3Q9NT62 314 aa15.12■□□□□ 0.01
SUSD1-201ENST00000355396 GNAI1P63096 354 aa15.11■□□□□ 0.01
SUSD1-201ENST00000355396 HNRNPUQ00839 825 aaKnown RBP eCLIP15.11■□□□□ 0.01
SUSD1-201ENST00000355396 TRMT2AQ8IZ69 625 aaKnown RBP15.11■□□□□ 0.01
SUSD1-201ENST00000355396 SMARCC1Q92922 1105 aaPredicted RBP15.11■□□□□ 0.01
SUSD1-201ENST00000355396 BTBD11A6QL63 1104 aa15.1■□□□□ 0.01
SUSD1-201ENST00000355396 ZNF790Q6PG37 636 aa15.1■□□□□ 0.01
SUSD1-201ENST00000355396 SYTL4Q96C24 671 aaPredicted RBP15.09■□□□□ 0.01
SUSD1-201ENST00000355396 ASAP1Q9ULH1 1129 aa15.09■□□□□ 0.01
SUSD1-201ENST00000355396 GOLGA2Q08379 1002 aa15.09■□□□□ 0.01
SUSD1-201ENST00000355396 RREB1Q92766 1687 aa15.09■□□□□ 0.01
SUSD1-201ENST00000355396 PALLDQ8WX93 1383 aa15.08■□□□□ 0.01
SUSD1-201ENST00000355396 TJP1Q07157 1748 aa15.08■□□□□ 0
SUSD1-201ENST00000355396 SLFN5Q08AF3 891 aa15.08■□□□□ 0
SUSD1-201ENST00000355396 VSIG10Q8N0Z9 540 aa15.08■□□□□ 0
SUSD1-201ENST00000355396 SPINK5Q9NQ38 1064 aaPredicted RBP15.08■□□□□ 0
SUSD1-201ENST00000355396 SALL2Q9Y467 1007 aaPredicted RBP15.08■□□□□ 0
SUSD1-201ENST00000355396 SENP3-EIF4A1A0A087X0R7 540 aa15.07■□□□□ 0
SUSD1-201ENST00000355396 UPF1Q92900 1129 aaKnown RBP eCLIP15.07■□□□□ 0
SUSD1-201ENST00000355396 MBIPQ9NS73 344 aa15.07■□□□□ 0
SUSD1-201ENST00000355396 EP400Q96L91 3159 aa15.07■□□□□ 0
SUSD1-201ENST00000355396 E9PSI1 815 aa15.07■□□□□ 0
SUSD1-201ENST00000355396 EIF4A1P60842 406 aaKnown RBP15.07■□□□□ 0
SUSD1-201ENST00000355396 KAT6BQ8WYB5 2073 aa15.07■□□□□ 0
SUSD1-201ENST00000355396 C5P01031 1676 aa15.07■□□□□ 0
SUSD1-201ENST00000355396 COL5A3P25940 1745 aaPredicted RBP15.07■□□□□ 0
SUSD1-201ENST00000355396 TSPYL4Q9UJ04 414 aa15.07■□□□□ 0
SUSD1-201ENST00000355396 LAMB4A4D0S4 1761 aa15.06■□□□□ 0
SUSD1-201ENST00000355396 TAF1LQ8IZX4 1826 aa15.06■□□□□ 0
SUSD1-201ENST00000355396 KCNQ3O43525 872 aa15.06■□□□□ 0
SUSD1-201ENST00000355396 SLC39A6Q13433 755 aa15.06■□□□□ 0
SUSD1-201ENST00000355396 SOS1Q07889 1333 aaPredicted RBP15.06■□□□□ 0
SUSD1-201ENST00000355396 CAMKK2Q96RR4 588 aa15.05■□□□□ 0
SUSD1-201ENST00000355396 MYH16Q9H6N6 1097 aa15.05■□□□□ 0
SUSD1-201ENST00000355396 MIS18AQ9NYP9 233 aa15.05■□□□□ 0
SUSD1-201ENST00000355396 APBA3O96018 575 aa15.05■□□□□ -0
SUSD1-201ENST00000355396 TTC5Q8N0Z6 440 aa15.05■□□□□ -0
SUSD1-201ENST00000355396 ZNF496Q96IT1 587 aaPredicted RBP15.05■□□□□ -0
SUSD1-201ENST00000355396 FMNL2Q96PY5 1086 aa15.05■□□□□ -0
SUSD1-201ENST00000355396 SLC4A9Q96Q91 983 aa15.05■□□□□ -0
SUSD1-201ENST00000355396 FANCIQ9NVI1 1328 aa15.05■□□□□ -0
SUSD1-201ENST00000355396 PRKCSHP14314 528 aaPredicted RBP15.04■□□□□ -0
SUSD1-201ENST00000355396 SLC27A3Q5K4L6 730 aa15.04■□□□□ -0
SUSD1-201ENST00000355396 HOXB7P09629 217 aa15.04■□□□□ -0
SUSD1-201ENST00000355396 PROM2Q8N271 834 aa15.04■□□□□ -0
SUSD1-201ENST00000355396 LOC102724428A0A0B4J2F2 783 aa15.03■□□□□ -0
SUSD1-201ENST00000355396 HMGB2P26583 209 aaKnown RBP15.03■□□□□ -0
SUSD1-201ENST00000355396 SIK1P57059 783 aa15.03■□□□□ -0
SUSD1-201ENST00000355396 DUSP27Q5VZP5 1158 aa15.03■□□□□ -0
SUSD1-201ENST00000355396 NUP188Q5SRE5 1749 aa15.03■□□□□ -0
SUSD1-201ENST00000355396 BAG6P46379 1132 aa15.03■□□□□ -0
SUSD1-201ENST00000355396 CDCA7LQ96GN5 454 aa15.03■□□□□ -0
SUSD1-201ENST00000355396 GIGYF1O75420 1035 aaPredicted RBP15.02■□□□□ -0
SUSD1-201ENST00000355396 SF3B2Q13435 895 aaKnown RBP15.02■□□□□ -0
SUSD1-201ENST00000355396 TEX13AQ9BXU3 409 aaPredicted RBP15.02□□□□□ -0.01
SUSD1-201ENST00000355396 LAS1LQ9Y4W2 734 aaKnown RBP15.02□□□□□ -0.01
SUSD1-201ENST00000355396 TXNRD1Q16881 649 aa15.01□□□□□ -0.01
SUSD1-201ENST00000355396 TSR2Q969E8 191 aaKnown RBP15.01□□□□□ -0.01
SUSD1-201ENST00000355396 SNRPA1P09661 255 aaKnown RBP15.01□□□□□ -0.01
SUSD1-201ENST00000355396 LRRC4BQ9NT99 713 aa15□□□□□ -0.01
SUSD1-201ENST00000355396 C4BP0C0L5 1744 aa15□□□□□ -0.01
SUSD1-201ENST00000355396 PTCD1O75127 700 aaKnown RBP14.99□□□□□ -0.01
SUSD1-201ENST00000355396 ITPK1Q13572 414 aa14.99□□□□□ -0.01
SUSD1-201ENST00000355396 CCNL1Q9UK58 526 aaPredicted RBP14.99□□□□□ -0.01
SUSD1-201ENST00000355396 CT47B1P0C2W7 299 aaPredicted RBP14.99□□□□□ -0.01
SUSD1-201ENST00000355396 EN1Q05925 392 aaPredicted RBP14.99□□□□□ -0.01
SUSD1-201ENST00000355396 C8orf58Q8NAV2 365 aa14.99□□□□□ -0.01
SUSD1-201ENST00000355396 RBM42Q9BTD8 480 aaKnown RBP14.99□□□□□ -0.01
SUSD1-201ENST00000355396 QSER1Q2KHR3 1735 aa14.98□□□□□ -0.01
SUSD1-201ENST00000355396 ATP6V1AP38606 617 aa14.98□□□□□ -0.01
SUSD1-201ENST00000355396 RC3H1Q5TC82 1133 aaKnown RBP14.98□□□□□ -0.01
SUSD1-201ENST00000355396 CNTNAP4Q9C0A0 1308 aa14.98□□□□□ -0.01
SUSD1-201ENST00000355396 CYP19A1P11511 503 aaPredicted RBP14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 309.3 ms