RNA–Protein interactions for RNA: ENST00000355231.9

HMBOX1-202, Transcript of homeobox containing 1, humanhuman

TSL 5 BASIC

Gene HMBOX1, Length 1,694 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-202ENST00000355231 SHPRHQ149N8 1683 aa6□□□□□ -1.45
HMBOX1-202ENST00000355231 BCL9LQ86UU0 1499 aa6□□□□□ -1.45
HMBOX1-202ENST00000355231 RGL2O15211 777 aa6□□□□□ -1.45
HMBOX1-202ENST00000355231 OS9Q13438 667 aaPredicted RBP6□□□□□ -1.45
HMBOX1-202ENST00000355231 PMFBP1Q8TBY8 1022 aa6□□□□□ -1.45
HMBOX1-202ENST00000355231 BSDC1Q9NW68 430 aaPredicted RBP6□□□□□ -1.45
HMBOX1-202ENST00000355231 CALCOCO1Q9P1Z2 691 aa6□□□□□ -1.45
HMBOX1-202ENST00000355231 PCDHB8Q9UN66 801 aa6□□□□□ -1.45
HMBOX1-202ENST00000355231 PCDHB13Q9Y5F0 798 aa6□□□□□ -1.45
HMBOX1-202ENST00000355231 RGS12O14924 1447 aa5.99□□□□□ -1.45
HMBOX1-202ENST00000355231 FAM83GA6ND36 823 aa5.99□□□□□ -1.45
HMBOX1-202ENST00000355231 IGSF3O75054 1194 aa5.99□□□□□ -1.45
HMBOX1-202ENST00000355231 XRCC6P12956 609 aaKnown RBP eCLIP5.99□□□□□ -1.45
HMBOX1-202ENST00000355231 SATB1Q01826 763 aa5.99□□□□□ -1.45
HMBOX1-202ENST00000355231 NBPF9Q3BBW0 867 aa5.99□□□□□ -1.45
HMBOX1-202ENST00000355231 ZSCAN30Q86W11 494 aa5.99□□□□□ -1.45
HMBOX1-202ENST00000355231 TMC1Q8TDI8 760 aa5.99□□□□□ -1.45
HMBOX1-202ENST00000355231 TIGD1Q96MW7 591 aa5.99□□□□□ -1.45
HMBOX1-202ENST00000355231 PANK3Q9H999 370 aa5.99□□□□□ -1.45
HMBOX1-202ENST00000355231 BLMP54132 1417 aaPredicted RBP5.99□□□□□ -1.45
HMBOX1-202ENST00000355231 RNF123Q5XPI4 1314 aa5.98□□□□□ -1.45
HMBOX1-202ENST00000355231 MINK1Q8N4C8 1332 aaPredicted RBP5.98□□□□□ -1.45
HMBOX1-202ENST00000355231 FRAT2O75474 233 aaPredicted RBP5.98□□□□□ -1.45
HMBOX1-202ENST00000355231 MCM5P33992 734 aa5.98□□□□□ -1.45
HMBOX1-202ENST00000355231 MFAP1P55081 439 aaKnown RBP5.98□□□□□ -1.45
HMBOX1-202ENST00000355231 RIPK4P57078 832 aa5.98□□□□□ -1.45
HMBOX1-202ENST00000355231 PLCB2Q00722 1185 aa5.98□□□□□ -1.45
HMBOX1-202ENST00000355231 GABPB1Q06547 395 aaPredicted RBP5.98□□□□□ -1.45
HMBOX1-202ENST00000355231 FAM43BQ6ZT52 329 aaPredicted RBP5.98□□□□□ -1.45
HMBOX1-202ENST00000355231 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5.98□□□□□ -1.453e-6■□□□□ 9.3
HMBOX1-202ENST00000355231 MNS1Q8NEH6 495 aa5.98□□□□□ -1.45
HMBOX1-202ENST00000355231 MYCBPQ99417 103 aaPredicted RBP5.98□□□□□ -1.45
HMBOX1-202ENST00000355231 POGKQ9P215 609 aa5.98□□□□□ -1.45
HMBOX1-202ENST00000355231 TRPC5Q9UL62 973 aaPredicted RBP5.98□□□□□ -1.45
HMBOX1-202ENST00000355231 KIF1CO43896 1103 aaKnown RBP5.98□□□□□ -1.45
HMBOX1-202ENST00000355231 IRX5P78411 483 aaPredicted RBP5.98□□□□□ -1.45
HMBOX1-202ENST00000355231 PSME1Q06323 249 aa5.98□□□□□ -1.45
HMBOX1-202ENST00000355231 CCDC173Q0VFZ6 552 aa5.98□□□□□ -1.45
HMBOX1-202ENST00000355231 BANK1Q8NDB2 785 aa5.98□□□□□ -1.45
HMBOX1-202ENST00000355231 GJD4Q96KN9 370 aaPredicted RBP5.98□□□□□ -1.45
HMBOX1-202ENST00000355231 BRMS1Q9HCU9 246 aa5.98□□□□□ -1.45
HMBOX1-202ENST00000355231 TERF2IPQ9NYB0 399 aa5.98□□□□□ -1.45
HMBOX1-202ENST00000355231 CGNQ9P2M7 1197 aaKnown RBP5.98□□□□□ -1.45
HMBOX1-202ENST00000355231 CDK12Q9NYV4 1490 aaPredicted RBP5.97□□□□□ -1.45
HMBOX1-202ENST00000355231 ATRNO75882 1429 aa5.97□□□□□ -1.45
HMBOX1-202ENST00000355231 CDC42BPGQ6DT37 1551 aa5.97□□□□□ -1.45
HMBOX1-202ENST00000355231 ARHGEF28Q8N1W1 1705 aaKnown RBP5.97□□□□□ -1.45
HMBOX1-202ENST00000355231 QRICH2Q9H0J4 1663 aa5.97□□□□□ -1.45
HMBOX1-202ENST00000355231 WASLO00401 505 aaPredicted RBP5.97□□□□□ -1.45
HMBOX1-202ENST00000355231 SOX12O15370 315 aa5.97□□□□□ -1.45
HMBOX1-202ENST00000355231 HMGN5P82970 282 aaKnown RBP5.97□□□□□ -1.45
HMBOX1-202ENST00000355231 SASS6Q6UVJ0 657 aa5.97□□□□□ -1.45
HMBOX1-202ENST00000355231 UNC5CLQ8IV45 518 aa5.97□□□□□ -1.45
HMBOX1-202ENST00000355231 NUDCQ9Y266 331 aa5.97□□□□□ -1.45
HMBOX1-202ENST00000355231 CEP83Q9Y592 693 aa5.97□□□□□ -1.45
HMBOX1-202ENST00000355231 USP32Q8NFA0 1604 aa5.96□□□□□ -1.46
HMBOX1-202ENST00000355231 UQCRHLA0A096LP55 91 aa5.96□□□□□ -1.46
HMBOX1-202ENST00000355231 ECM2O94769 699 aaPredicted RBP5.96□□□□□ -1.46
HMBOX1-202ENST00000355231 UQCRHP07919 91 aa5.96□□□□□ -1.46
HMBOX1-202ENST00000355231 TNNT3P45378 269 aaPredicted RBP5.96□□□□□ -1.46
HMBOX1-202ENST00000355231 LMOD2Q6P5Q4 547 aa5.96□□□□□ -1.46
HMBOX1-202ENST00000355231 TMED8Q6PL24 325 aaPredicted RBP5.96□□□□□ -1.46
HMBOX1-202ENST00000355231 FEZ1Q99689 392 aa5.96□□□□□ -1.46
HMBOX1-202ENST00000355231 SGIP1Q9BQI5 828 aa5.96□□□□□ -1.46
HMBOX1-202ENST00000355231 ZNF500O60304 480 aaPredicted RBP5.95□□□□□ -1.46
HMBOX1-202ENST00000355231 ONECUT3O60422 494 aaPredicted RBP5.95□□□□□ -1.46
HMBOX1-202ENST00000355231 MAP2K1Q02750 393 aaPredicted RBP5.95□□□□□ -1.46
HMBOX1-202ENST00000355231 ZKSCAN8Q15776 578 aaPredicted RBP5.95□□□□□ -1.46
HMBOX1-202ENST00000355231 ZNF771Q7L3S4 317 aaPredicted RBP5.95□□□□□ -1.46
HMBOX1-202ENST00000355231 NUDT16Q96DE0 195 aaKnown RBP5.95□□□□□ -1.46
HMBOX1-202ENST00000355231 CDK19Q9BWU1 502 aa5.95□□□□□ -1.46
HMBOX1-202ENST00000355231 GRPEL1Q9HAV7 217 aa5.95□□□□□ -1.46
HMBOX1-202ENST00000355231 SLIT2O94813 1529 aa5.95□□□□□ -1.46
HMBOX1-202ENST00000355231 TULP4Q9NRJ4 1543 aa5.95□□□□□ -1.46
HMBOX1-202ENST00000355231 SBNO1A3KN83 1393 aa5.95□□□□□ -1.46
HMBOX1-202ENST00000355231 E9PSI1 815 aa5.94□□□□□ -1.46
HMBOX1-202ENST00000355231 NRDCO43847 1150 aa5.94□□□□□ -1.46
HMBOX1-202ENST00000355231 CCDC172P0C7W6 258 aa5.94□□□□□ -1.46
HMBOX1-202ENST00000355231 KCNJ4P48050 445 aa5.94□□□□□ -1.46
HMBOX1-202ENST00000355231 NBPF6Q5VWK0 638 aa5.94□□□□□ -1.46
HMBOX1-202ENST00000355231 NBPF5PQ86XG9 351 aaPredicted RBP5.94□□□□□ -1.46
HMBOX1-202ENST00000355231 PDCL2Q8N4E4 241 aa5.94□□□□□ -1.46
HMBOX1-202ENST00000355231 NBPF4Q96M43 638 aa5.94□□□□□ -1.46
HMBOX1-202ENST00000355231 NCAPGQ9BPX3 1015 aa5.94□□□□□ -1.46
HMBOX1-202ENST00000355231 BMP2KQ9NSY1 1161 aaPredicted RBP5.94□□□□□ -1.46
HMBOX1-202ENST00000355231 SMC4Q9NTJ3 1288 aa5.94□□□□□ -1.46
HMBOX1-202ENST00000355231 KNSTRNQ9Y448 316 aa5.94□□□□□ -1.46
HMBOX1-202ENST00000355231 DLC1Q96QB1 1528 aa5.94□□□□□ -1.46
HMBOX1-202ENST00000355231 TULP2O00295 520 aa5.94□□□□□ -1.46
HMBOX1-202ENST00000355231 GOLIM4O00461 696 aa5.94□□□□□ -1.46
HMBOX1-202ENST00000355231 PPP2R1AP30153 589 aa5.94□□□□□ -1.46
HMBOX1-202ENST00000355231 NBPF10Q6P3W6 841 aaKnown RBP5.94□□□□□ -1.46
HMBOX1-202ENST00000355231 CERS3Q8IU89 383 aa5.94□□□□□ -1.46
HMBOX1-202ENST00000355231 SEPT12Q8IYM1 358 aa5.94□□□□□ -1.46
HMBOX1-202ENST00000355231 OTUD6BQ8N6M0 293 aa5.94□□□□□ -1.46
HMBOX1-202ENST00000355231 PRIMPOLQ96LW4 560 aa5.94□□□□□ -1.46
HMBOX1-202ENST00000355231 COL22A1Q8NFW1 1626 aaPredicted RBP5.94□□□□□ -1.46
HMBOX1-202ENST00000355231 TNS3Q68CZ2 1445 aa5.93□□□□□ -1.46
HMBOX1-202ENST00000355231 FMN2Q9NZ56 1722 aa5.93□□□□□ -1.46
HMBOX1-202ENST00000355231 PDE3BQ13370 1112 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms