RNA–Protein interactions for RNA: ENST00000354757.4

PCDHB11-201, Transcript of protocadherin beta 11, humanhuman

APPRIS P1 BASIC

Gene PCDHB11, Length 4,198 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-201ENST00000354757 CHMP4CQ96CF2 233 aa14.95□□□□□ -0.02
PCDHB11-201ENST00000354757 TMEM94Q12767 1356 aa14.95□□□□□ -0.02
PCDHB11-201ENST00000354757 CWF19L2Q2TBE0 894 aaKnown RBP14.95□□□□□ -0.02
PCDHB11-201ENST00000354757 PPP1R42Q7Z4L9 355 aa14.95□□□□□ -0.02
PCDHB11-201ENST00000354757 DNTTIP2Q5QJE6 756 aaKnown RBP14.94□□□□□ -0.02
PCDHB11-201ENST00000354757 KDM5CP41229 1560 aa14.94□□□□□ -0.02
PCDHB11-201ENST00000354757 RNF20Q5VTR2 975 aa14.94□□□□□ -0.02
PCDHB11-201ENST00000354757 SNRPA1P09661 255 aaKnown RBP14.94□□□□□ -0.02
PCDHB11-201ENST00000354757 DNAJC5Q9H3Z4 198 aa14.94□□□□□ -0.02
PCDHB11-201ENST00000354757 NPC1L1Q9UHC9 1359 aa14.93□□□□□ -0.02
PCDHB11-201ENST00000354757 LRRFIP1Q32MZ4 808 aaKnown RBP14.93□□□□□ -0.02
PCDHB11-201ENST00000354757 UPF3BQ9BZI7 483 aaKnown RBP14.93□□□□□ -0.02
PCDHB11-201ENST00000354757 HYPKQ9NX55 129 aa14.93□□□□□ -0.02
PCDHB11-201ENST00000354757 TRMT112Q9UI30 125 aaKnown RBP14.93□□□□□ -0.02
PCDHB11-201ENST00000354757 TRDNQ13061 729 aa14.93□□□□□ -0.02
PCDHB11-201ENST00000354757 ANKRD13DQ6ZTN6 518 aa14.93□□□□□ -0.02
PCDHB11-201ENST00000354757 C16orf71Q8IYS4 520 aaPredicted RBP14.93□□□□□ -0.02
PCDHB11-201ENST00000354757 SAMD1Q6SPF0 538 aaPredicted RBP14.92□□□□□ -0.02
PCDHB11-201ENST00000354757 ERC1Q8IUD2 1116 aa14.92□□□□□ -0.02
PCDHB11-201ENST00000354757 SBNO2Q9Y2G9 1366 aa14.92□□□□□ -0.02
PCDHB11-201ENST00000354757 IL2RBP14784 551 aa14.92□□□□□ -0.02
PCDHB11-201ENST00000354757 MX1P20591 662 aa14.92□□□□□ -0.02
PCDHB11-201ENST00000354757 TTC39AQ5SRH9 613 aa14.92□□□□□ -0.02
PCDHB11-201ENST00000354757 CPLX1O14810 134 aa14.92□□□□□ -0.02
PCDHB11-201ENST00000354757 PHF14O94880 888 aa14.92□□□□□ -0.02
PCDHB11-201ENST00000354757 RRP12Q5JTH9 1297 aaKnown RBP14.92□□□□□ -0.02
PCDHB11-201ENST00000354757 CLTCL1P53675 1640 aa14.91□□□□□ -0.02
PCDHB11-201ENST00000354757 PTPRCP08575 1304 aa14.91□□□□□ -0.02
PCDHB11-201ENST00000354757 SF3A1Q15459 793 aaKnown RBP14.91□□□□□ -0.02
PCDHB11-201ENST00000354757 DDB1Q16531 1140 aa14.91□□□□□ -0.02
PCDHB11-201ENST00000354757 CCDC158Q5M9N0 1113 aa14.91□□□□□ -0.02
PCDHB11-201ENST00000354757 KIF1BPQ96EK5 621 aa14.91□□□□□ -0.02
PCDHB11-201ENST00000354757 ZFYVE9O95405 1425 aa14.91□□□□□ -0.02
PCDHB11-201ENST00000354757 NFXL1Q6ZNB6 911 aa14.91□□□□□ -0.02
PCDHB11-201ENST00000354757 RALYLQ86SE5 291 aaKnown RBP14.91□□□□□ -0.02
PCDHB11-201ENST00000354757 TBC1D2BQ9UPU7 963 aa14.91□□□□□ -0.02
PCDHB11-201ENST00000354757 PLXNC1O60486 1568 aa14.9□□□□□ -0.02
PCDHB11-201ENST00000354757 ZNF335Q9H4Z2 1342 aaPredicted RBP14.9□□□□□ -0.02
PCDHB11-201ENST00000354757 KCNQ3O43525 872 aa14.9□□□□□ -0.02
PCDHB11-201ENST00000354757 SBNO1A3KN83 1393 aa14.9□□□□□ -0.02
PCDHB11-201ENST00000354757 METTL24Q5JXM2 366 aa14.9□□□□□ -0.02
PCDHB11-201ENST00000354757 SNRKQ9NRH2 765 aa14.9□□□□□ -0.02
PCDHB11-201ENST00000354757 CHMP5Q9NZZ3 219 aa14.9□□□□□ -0.02
PCDHB11-201ENST00000354757 PA2G4Q9UQ80 394 aaKnown RBP14.9□□□□□ -0.02
PCDHB11-201ENST00000354757 IDH1O75874 414 aaKnown RBP14.9□□□□□ -0.02
PCDHB11-201ENST00000354757 STK3Q13188 491 aa14.9□□□□□ -0.02
PCDHB11-201ENST00000354757 MAP3K5Q99683 1374 aa14.9□□□□□ -0.02
PCDHB11-201ENST00000354757 PLEKHG1Q9ULL1 1385 aa14.9□□□□□ -0.02
PCDHB11-201ENST00000354757 ABCF2Q9UG63 623 aa14.89□□□□□ -0.03
PCDHB11-201ENST00000354757 SMC3Q9UQE7 1217 aa14.89□□□□□ -0.03
PCDHB11-201ENST00000354757 RNMTO43148 476 aaKnown RBP14.89□□□□□ -0.03
PCDHB11-201ENST00000354757 LARP6Q9BRS8 491 aaKnown RBP14.89□□□□□ -0.03
PCDHB11-201ENST00000354757 NOL10Q9BSC4 688 aaKnown RBP14.89□□□□□ -0.03
PCDHB11-201ENST00000354757 PKNOX2Q96KN3 472 aa14.88□□□□□ -0.03
PCDHB11-201ENST00000354757 PIK3R4Q99570 1358 aa14.88□□□□□ -0.03
PCDHB11-201ENST00000354757 ABCA9Q8IUA7 1624 aa14.88□□□□□ -0.03
PCDHB11-201ENST00000354757 MYOM2P54296 1465 aa14.88□□□□□ -0.03
PCDHB11-201ENST00000354757 A2ML1A8K2U0 1454 aa14.88□□□□□ -0.03
PCDHB11-201ENST00000354757 DRC7Q8IY82 874 aa14.87□□□□□ -0.03
PCDHB11-201ENST00000354757 TET3O43151 1660 aa14.87□□□□□ -0.03
PCDHB11-201ENST00000354757 IQGAP3Q86VI3 1631 aa14.87□□□□□ -0.03
PCDHB11-201ENST00000354757 DHX16O60231 1041 aaKnown RBP14.87□□□□□ -0.03
PCDHB11-201ENST00000354757 SYNE3Q6ZMZ3 975 aa14.87□□□□□ -0.03
PCDHB11-201ENST00000354757 ARAP3Q8WWN8 1544 aa14.87□□□□□ -0.03
PCDHB11-201ENST00000354757 IL17REQ8NFR9 667 aa14.87□□□□□ -0.03
PCDHB11-201ENST00000354757 RASSF8Q8NHQ8 419 aa14.87□□□□□ -0.03
PCDHB11-201ENST00000354757 UBE2Q2Q8WVN8 375 aa14.87□□□□□ -0.03
PCDHB11-201ENST00000354757 KIF1BO60333 1816 aa14.86□□□□□ -0.03
PCDHB11-201ENST00000354757 RIMBP3CA6NJZ7 1639 aa14.86□□□□□ -0.03
PCDHB11-201ENST00000354757 RIMBP3BA6NNM3 1639 aa14.86□□□□□ -0.03
PCDHB11-201ENST00000354757 RIMBP3Q9UFD9 1639 aa14.86□□□□□ -0.03
PCDHB11-201ENST00000354757 IFIT5Q13325 482 aaKnown RBP14.86□□□□□ -0.03
PCDHB11-201ENST00000354757 CHL1O00533 1208 aa14.86□□□□□ -0.03
PCDHB11-201ENST00000354757 ZPR1O75312 459 aa14.86□□□□□ -0.03
PCDHB11-201ENST00000354757 CHAF1AQ13111 956 aaPredicted RBP14.86□□□□□ -0.03
PCDHB11-201ENST00000354757 ZNF219Q9P2Y4 722 aaPredicted RBP14.86□□□□□ -0.03
PCDHB11-201ENST00000354757 ATP6V1AP38606 617 aa14.85□□□□□ -0.03
PCDHB11-201ENST00000354757 SIRT1Q96EB6 747 aa14.85□□□□□ -0.03
PCDHB11-201ENST00000354757 AKAP17AQ02040 695 aaKnown RBP14.85□□□□□ -0.03
PCDHB11-201ENST00000354757 WWC3Q9ULE0 1092 aa14.85□□□□□ -0.03
PCDHB11-201ENST00000354757 NLRP1Q9C000 1473 aa14.85□□□□□ -0.03
PCDHB11-201ENST00000354757 A1BGP04217 495 aa14.85□□□□□ -0.03
PCDHB11-201ENST00000354757 ZNF790Q6PG37 636 aa14.85□□□□□ -0.03
PCDHB11-201ENST00000354757 LMBR1LQ6UX01 489 aa14.85□□□□□ -0.03
PCDHB11-201ENST00000354757 LDHAL6AQ6ZMR3 332 aa14.85□□□□□ -0.03
PCDHB11-201ENST00000354757 ARHGAP45Q92619 1136 aa14.85□□□□□ -0.03
PCDHB11-201ENST00000354757 DCAF5Q96JK2 942 aa14.85□□□□□ -0.03
PCDHB11-201ENST00000354757 NPHP4O75161 1426 aaPredicted RBP14.84□□□□□ -0.03
PCDHB11-201ENST00000354757 CPLX2Q6PUV4 134 aaKnown RBP14.84□□□□□ -0.03
PCDHB11-201ENST00000354757 CREBRFQ8IUR6 639 aa14.84□□□□□ -0.03
PCDHB11-201ENST00000354757 ZNF496Q96IT1 587 aaPredicted RBP14.84□□□□□ -0.03
PCDHB11-201ENST00000354757 KIF3AQ9Y496 699 aa14.84□□□□□ -0.03
PCDHB11-201ENST00000354757 RNF17Q9BXT8 1623 aaKnown RBP14.84□□□□□ -0.03
PCDHB11-201ENST00000354757 ZBTB40Q9NUA8 1239 aa14.84□□□□□ -0.03
PCDHB11-201ENST00000354757 ATP2B1P20020 1258 aa14.84□□□□□ -0.03
PCDHB11-201ENST00000354757 FAM43AQ8N2R8 423 aa14.84□□□□□ -0.03
PCDHB11-201ENST00000354757 SF3B2Q13435 895 aaKnown RBP14.83□□□□□ -0.03
PCDHB11-201ENST00000354757 VPS53Q5VIR6 699 aa14.83□□□□□ -0.03
PCDHB11-201ENST00000354757 KSR2Q6VAB6 950 aa14.83□□□□□ -0.03
PCDHB11-201ENST00000354757 CWC25Q9NXE8 425 aaPredicted RBP14.83□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms