RNA–Protein interactions for RNA: ENST00000354534.10

SCN8A-201, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCN8A, Length 11,556 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-201ENST00000354534 CCDC155Q8N6L0 562 aa9.31□□□□□ -0.92
SCN8A-201ENST00000354534 CCDC170Q8IYT3 715 aa9.31□□□□□ -0.92
SCN8A-201ENST00000354534 CCDC150Q8NCX0 1101 aa9.31□□□□□ -0.92
SCN8A-201ENST00000354534 EID1Q9Y6B2 187 aa9.31□□□□□ -0.92
SCN8A-201ENST00000354534 SETDB1Q15047 1291 aa9.31□□□□□ -0.92
SCN8A-201ENST00000354534 PAXIP1Q6ZW49 1069 aaPredicted RBP9.31□□□□□ -0.92
SCN8A-201ENST00000354534 CCDC63Q8NA47 563 aa9.31□□□□□ -0.92
SCN8A-201ENST00000354534 SPATA32Q96LK8 384 aa9.31□□□□□ -0.92
SCN8A-201ENST00000354534 PRPF31Q8WWY3 499 aaKnown RBP9.31□□□□□ -0.92
SCN8A-201ENST00000354534 CAMK4Q16566 473 aa9.31□□□□□ -0.92
SCN8A-201ENST00000354534 NOL7Q9UMY1 257 aaKnown RBP9.31□□□□□ -0.92
SCN8A-201ENST00000354534 RABGAP1Q9Y3P9 1069 aa9.31□□□□□ -0.92
SCN8A-201ENST00000354534 MAP3K9P80192 1104 aa9.31□□□□□ -0.92
SCN8A-201ENST00000354534 RGS22Q8NE09 1264 aa9.31□□□□□ -0.92
SCN8A-201ENST00000354534 PIBF1Q8WXW3 757 aa9.31□□□□□ -0.92
SCN8A-201ENST00000354534 BICDL2A1A5D9 508 aa9.31□□□□□ -0.92
SCN8A-201ENST00000354534 NDC80O14777 642 aa9.31□□□□□ -0.92
SCN8A-201ENST00000354534 CCDC57Q2TAC2 916 aa9.31□□□□□ -0.92
SCN8A-201ENST00000354534 CTAGE6Q86UF2 777 aa9.31□□□□□ -0.92
SCN8A-201ENST00000354534 IQCGQ9H095 443 aaKnown RBP9.31□□□□□ -0.92
SCN8A-201ENST00000354534 FKBP15Q5T1M5 1219 aa9.3□□□□□ -0.92
SCN8A-201ENST00000354534 DACT3Q96B18 629 aaPredicted RBP9.3□□□□□ -0.92
SCN8A-201ENST00000354534 SFPQP23246 707 aaKnown RBP eCLIP9.3□□□□□ -0.92
SCN8A-201ENST00000354534 NUP88Q99567 741 aaPredicted RBP9.3□□□□□ -0.92
SCN8A-201ENST00000354534 TRAK1Q9UPV9 953 aa9.3□□□□□ -0.92
SCN8A-201ENST00000354534 OTUD6BQ8N6M0 293 aa9.3□□□□□ -0.92
SCN8A-201ENST00000354534 UBE2Q2Q8WVN8 375 aa9.3□□□□□ -0.92
SCN8A-201ENST00000354534 C16orf45Q96MC5 204 aaPredicted RBP9.3□□□□□ -0.92
SCN8A-201ENST00000354534 KLHL10Q6JEL2 608 aa9.3□□□□□ -0.92
SCN8A-201ENST00000354534 ERCC5P28715 1186 aaPredicted RBP9.3□□□□□ -0.92
SCN8A-201ENST00000354534 BANK1Q8NDB2 785 aa9.3□□□□□ -0.92
SCN8A-201ENST00000354534 GOLIM4O00461 696 aa9.3□□□□□ -0.92
SCN8A-201ENST00000354534 LARP1BQ659C4 914 aaKnown RBP9.3□□□□□ -0.92
SCN8A-201ENST00000354534 MORC4Q8TE76 937 aa9.3□□□□□ -0.92
SCN8A-201ENST00000354534 POTEB2H3BUK9 544 aa9.3□□□□□ -0.92
SCN8A-201ENST00000354534 MYCNP04198 464 aaPredicted RBP9.3□□□□□ -0.92
SCN8A-201ENST00000354534 TDRD12Q587J7 1177 aaKnown RBP9.3□□□□□ -0.92
SCN8A-201ENST00000354534 ZSCAN30Q86W11 494 aa9.3□□□□□ -0.92
SCN8A-201ENST00000354534 TMEM87AQ8NBN3 555 aa9.29□□□□□ -0.92
SCN8A-201ENST00000354534 STIM2Q9P246 746 aa9.29□□□□□ -0.92
SCN8A-201ENST00000354534 WDR33Q9C0J8 1336 aaKnown RBP9.29□□□□□ -0.92
SCN8A-201ENST00000354534 CCDC83Q8IWF9 413 aa9.29□□□□□ -0.92
SCN8A-201ENST00000354534 GOLGA6L9A6NEM1 432 aa9.29□□□□□ -0.92
SCN8A-201ENST00000354534 CCDC144CPQ8IYA2 1237 aa9.29□□□□□ -0.92
SCN8A-201ENST00000354534 COG3Q96JB2 828 aa9.29□□□□□ -0.92
SCN8A-201ENST00000354534 ATRIPQ8WXE1 791 aa9.29□□□□□ -0.92
SCN8A-201ENST00000354534 WDR63Q8IWG1 891 aa9.29□□□□□ -0.92
SCN8A-201ENST00000354534 FERMT1Q9BQL6 677 aa9.29□□□□□ -0.92
SCN8A-201ENST00000354534 A0A1B0GUL7 405 aa9.29□□□□□ -0.92
SCN8A-201ENST00000354534 CASQ2O14958 399 aaPredicted RBP9.29□□□□□ -0.92
SCN8A-201ENST00000354534 NOP2P46087 812 aaKnown RBP9.29□□□□□ -0.92
SCN8A-201ENST00000354534 ANKRD1Q15327 319 aa9.29□□□□□ -0.92
SCN8A-201ENST00000354534 CCDC121Q6ZUS5 278 aa9.29□□□□□ -0.92
SCN8A-201ENST00000354534 LCA5Q86VQ0 697 aa9.29□□□□□ -0.92
SCN8A-201ENST00000354534 TOP1P11387 765 aaKnown RBP9.29□□□□□ -0.92
SCN8A-201ENST00000354534 STMN1P16949 149 aa9.29□□□□□ -0.92
SCN8A-201ENST00000354534 JADE2Q9NQC1 790 aa9.29□□□□□ -0.92
SCN8A-201ENST00000354534 CKAP4Q07065 602 aaKnown RBP9.29□□□□□ -0.92
SCN8A-201ENST00000354534 TSPYL2Q9H2G4 693 aaPredicted RBP9.29□□□□□ -0.92
SCN8A-201ENST00000354534 EVC2Q86UK5 1308 aa9.29□□□□□ -0.92
SCN8A-201ENST00000354534 KIF5AQ12840 1032 aa9.28□□□□□ -0.92
SCN8A-201ENST00000354534 USP47Q96K76 1375 aa9.28□□□□□ -0.92
SCN8A-201ENST00000354534 HIP1O00291 1037 aa9.28□□□□□ -0.92
SCN8A-201ENST00000354534 GMNNO75496 209 aa9.28□□□□□ -0.92
SCN8A-201ENST00000354534 WDR78Q5VTH9 848 aa9.28□□□□□ -0.92
SCN8A-201ENST00000354534 TSG101Q99816 390 aa9.28□□□□□ -0.92
SCN8A-201ENST00000354534 SYCE3A1L190 88 aa9.28□□□□□ -0.92
SCN8A-201ENST00000354534 PPP1R12CQ9BZL4 782 aa9.28□□□□□ -0.92
SCN8A-201ENST00000354534 CYP46A1Q9Y6A2 500 aa9.28□□□□□ -0.92
SCN8A-201ENST00000354534 CHMP2AO43633 222 aa9.28□□□□□ -0.92
SCN8A-201ENST00000354534 PPFIA2O75334 1257 aa9.28□□□□□ -0.92
SCN8A-201ENST00000354534 MAP4K4O95819 1239 aaPredicted RBP9.28□□□□□ -0.92
SCN8A-201ENST00000354534 RBM5P52756 815 aaKnown RBP eCLIP9.28□□□□□ -0.92
SCN8A-201ENST00000354534 FAM160A1Q05DH4 1040 aa9.28□□□□□ -0.92
SCN8A-201ENST00000354534 MAP3K11Q16584 847 aa9.28□□□□□ -0.92
SCN8A-201ENST00000354534 TTC39AQ5SRH9 613 aa9.28□□□□□ -0.92
SCN8A-201ENST00000354534 UBA5Q9GZZ9 404 aa9.28□□□□□ -0.92
SCN8A-201ENST00000354534 LUC7L2Q9Y383 392 aaKnown RBP9.28□□□□□ -0.92
SCN8A-201ENST00000354534 LIG1P18858 919 aa9.28□□□□□ -0.92
SCN8A-201ENST00000354534 PRC1O43663 620 aa9.27□□□□□ -0.92
SCN8A-201ENST00000354534 SPTY2D1Q68D10 685 aaPredicted RBP9.27□□□□□ -0.92
SCN8A-201ENST00000354534 NBPF1Q3BBV0 1214 aa9.27□□□□□ -0.92
SCN8A-201ENST00000354534 ALS2CR12Q96Q35 445 aa9.27□□□□□ -0.92
SCN8A-201ENST00000354534 ATP11AP98196 1134 aa9.27□□□□□ -0.93
SCN8A-201ENST00000354534 WASHC2AQ641Q2 1341 aa9.27□□□□□ -0.93
SCN8A-201ENST00000354534 CCDC114Q96M63 670 aa9.27□□□□□ -0.93
SCN8A-201ENST00000354534 XPCQ01831 940 aaPredicted RBP9.27□□□□□ -0.93
SCN8A-201ENST00000354534 RSPH3Q86UC2 560 aa9.27□□□□□ -0.93
SCN8A-201ENST00000354534 ZNF354CQ86Y25 554 aa9.27□□□□□ -0.93
SCN8A-201ENST00000354534 ZC4H2Q9NQZ6 224 aa9.27□□□□□ -0.93
SCN8A-201ENST00000354534 TERF1P54274 439 aa9.27□□□□□ -0.93
SCN8A-201ENST00000354534 STMN2Q93045 179 aa9.27□□□□□ -0.93
SCN8A-201ENST00000354534 ZBTB9Q96C00 473 aa9.27□□□□□ -0.93
SCN8A-201ENST00000354534 CLIP2Q9UDT6 1046 aa9.27□□□□□ -0.93
SCN8A-201ENST00000354534 PCK1P35558 622 aa9.27□□□□□ -0.93
SCN8A-201ENST00000354534 UBTFL1P0CB47 393 aaPredicted RBP9.27□□□□□ -0.93
SCN8A-201ENST00000354534 PDCD7Q8N8D1 485 aaKnown RBP9.27□□□□□ -0.93
SCN8A-201ENST00000354534 USP5P45974 858 aa9.26□□□□□ -0.93
SCN8A-201ENST00000354534 DNAJC21Q5F1R6 531 aaKnown RBP9.26□□□□□ -0.93
SCN8A-201ENST00000354534 PPFIBP2Q8ND30 876 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms