RNA–Protein interactions for RNA: ENST00000353507.9

DDX4-201, Transcript of DEAD-box helicase 4, humanhuman

TSL 1 (best) BASIC

Gene DDX4, Length 2,778 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX4-201ENST00000353507 EYA1Q99502 592 aa14.85□□□□□ -0.03
DDX4-201ENST00000353507 PTPRUQ92729 1446 aa14.85□□□□□ -0.03
DDX4-201ENST00000353507 FLIIQ13045 1269 aa14.85□□□□□ -0.03
DDX4-201ENST00000353507 CCDC30Q5VVM6 783 aa14.85□□□□□ -0.03
DDX4-201ENST00000353507 LRRCC1Q9C099 1032 aa14.85□□□□□ -0.03
DDX4-201ENST00000353507 RGPD8O14715 1765 aaPredicted RBP14.84□□□□□ -0.03
DDX4-201ENST00000353507 PKP1Q13835 747 aa14.84□□□□□ -0.03
DDX4-201ENST00000353507 ZGPATQ8N5A5 531 aaKnown RBP14.84□□□□□ -0.03
DDX4-201ENST00000353507 CACNA1FO60840 1977 aa14.84□□□□□ -0.03
DDX4-201ENST00000353507 MCCP23508 829 aa14.84□□□□□ -0.03
DDX4-201ENST00000353507 CCDC173Q0VFZ6 552 aa14.84□□□□□ -0.03
DDX4-201ENST00000353507 AMOTL2Q9Y2J4 779 aa14.84□□□□□ -0.03
DDX4-201ENST00000353507 TSHZ3Q63HK5 1081 aa14.83□□□□□ -0.04
DDX4-201ENST00000353507 CAVIN1Q6NZI2 390 aaKnown RBP14.83□□□□□ -0.04
DDX4-201ENST00000353507 LRRC37A3O60309 1634 aa14.83□□□□□ -0.04
DDX4-201ENST00000353507 HTATSF1O43719 755 aaKnown RBP14.83□□□□□ -0.04
DDX4-201ENST00000353507 MX1P20591 662 aa14.83□□□□□ -0.04
DDX4-201ENST00000353507 NECTIN2Q92692 538 aa14.83□□□□□ -0.04
DDX4-201ENST00000353507 DIP2AQ14689 1571 aa14.83□□□□□ -0.04
DDX4-201ENST00000353507 PIK3C2AO00443 1686 aa14.83□□□□□ -0.04
DDX4-201ENST00000353507 XRN1Q8IZH2 1706 aaKnown RBP14.82□□□□□ -0.04
DDX4-201ENST00000353507 GNAT3A8MTJ3 354 aa14.82□□□□□ -0.04
DDX4-201ENST00000353507 TRIM6-TRIM34B2RNG4 842 aa14.82□□□□□ -0.04
DDX4-201ENST00000353507 NEK4P51957 841 aa14.82□□□□□ -0.04
DDX4-201ENST00000353507 LMBRD1Q9NUN5 540 aa14.82□□□□□ -0.04
DDX4-201ENST00000353507 TUBGCP6Q96RT7 1819 aa14.82□□□□□ -0.04
DDX4-201ENST00000353507 NLRP6P59044 892 aa14.81□□□□□ -0.04
DDX4-201ENST00000353507 ERBB4Q15303 1308 aa14.81□□□□□ -0.04
DDX4-201ENST00000353507 RILPL2Q969X0 211 aa14.81□□□□□ -0.04
DDX4-201ENST00000353507 ESYT1Q9BSJ8 1104 aa14.81□□□□□ -0.04
DDX4-201ENST00000353507 ZNF445P59923 1031 aa14.8□□□□□ -0.04
DDX4-201ENST00000353507 PNMA6EA0A0J9YXQ4 647 aa14.8□□□□□ -0.04
DDX4-201ENST00000353507 MCM2P49736 904 aa14.8□□□□□ -0.04
DDX4-201ENST00000353507 ATP8B2P98198 1209 aa14.8□□□□□ -0.04
DDX4-201ENST00000353507 ZSCAN23Q3MJ62 389 aa14.8□□□□□ -0.04
DDX4-201ENST00000353507 ANO2Q9NQ90 1003 aa14.8□□□□□ -0.04
DDX4-201ENST00000353507 N4BP2Q86UW6 1770 aaPredicted RBP14.8□□□□□ -0.04
DDX4-201ENST00000353507 PRPF40AO75400 957 aaKnown RBP14.79□□□□□ -0.04
DDX4-201ENST00000353507 LRRFIP2Q9Y608 721 aaKnown RBP14.79□□□□□ -0.04
DDX4-201ENST00000353507 SALL3Q9BXA9 1300 aa14.79□□□□□ -0.04
DDX4-201ENST00000353507 MAP3K5Q99683 1374 aa14.79□□□□□ -0.04
DDX4-201ENST00000353507 TMX3Q96JJ7 454 aa14.79□□□□□ -0.04
DDX4-201ENST00000353507 SRCIN1Q9C0H9 1055 aa14.79□□□□□ -0.04
DDX4-201ENST00000353507 SOS1Q07889 1333 aaPredicted RBP14.78□□□□□ -0.04
DDX4-201ENST00000353507 UBTFL1P0CB47 393 aaPredicted RBP14.78□□□□□ -0.04
DDX4-201ENST00000353507 PPP1R9BQ96SB3 815 aa14.78□□□□□ -0.04
DDX4-201ENST00000353507 PXDNLA1KZ92 1463 aa14.78□□□□□ -0.04
DDX4-201ENST00000353507 HOXC9P31274 260 aa14.78□□□□□ -0.04
DDX4-201ENST00000353507 CEBPAP49715 358 aaPredicted RBP14.78□□□□□ -0.04
DDX4-201ENST00000353507 NUTM2GQ5VZR2 741 aa14.77□□□□□ -0.04
DDX4-201ENST00000353507 PLPPR3Q6T4P5 718 aa14.77□□□□□ -0.04
DDX4-201ENST00000353507 LTV1Q96GA3 475 aaPredicted RBP14.77□□□□□ -0.04
DDX4-201ENST00000353507 ZDHHC9Q9Y397 364 aa14.77□□□□□ -0.04
DDX4-201ENST00000353507 TBX22Q9Y458 520 aa14.77□□□□□ -0.04
DDX4-201ENST00000353507 CHMLP26374 656 aa14.77□□□□□ -0.05
DDX4-201ENST00000353507 ANAPC15P60006 121 aa14.77□□□□□ -0.05
DDX4-201ENST00000353507 TAF7Q15545 349 aaPredicted RBP14.77□□□□□ -0.05
DDX4-201ENST00000353507 FOXD4L5Q5VV16 416 aaPredicted RBP14.77□□□□□ -0.05
DDX4-201ENST00000353507 FOXD4L4Q8WXT5 416 aaPredicted RBP14.77□□□□□ -0.05
DDX4-201ENST00000353507 NOL8Q76FK4 1167 aaKnown RBP14.76□□□□□ -0.05
DDX4-201ENST00000353507 HDGFL1Q5TGJ6 251 aa14.76□□□□□ -0.05
DDX4-201ENST00000353507 SLIT1O75093 1534 aa14.75□□□□□ -0.05
DDX4-201ENST00000353507 STAP2Q9UGK3 403 aa14.75□□□□□ -0.05
DDX4-201ENST00000353507 PALD1Q9ULE6 856 aa14.75□□□□□ -0.05
DDX4-201ENST00000353507 IL17REQ8NFR9 667 aa14.75□□□□□ -0.05
DDX4-201ENST00000353507 GPT2Q8TD30 523 aa14.75□□□□□ -0.05
DDX4-201ENST00000353507 BABAM1Q9NWV8 329 aa14.75□□□□□ -0.05
DDX4-201ENST00000353507 RBM27Q9P2N5 1060 aaKnown RBP14.75□□□□□ -0.05
DDX4-201ENST00000353507 AOX1Q06278 1338 aa14.74□□□□□ -0.05
DDX4-201ENST00000353507 C14orf37Q86TY3 774 aa14.74□□□□□ -0.05
DDX4-201ENST00000353507 IL1RAPL2Q9NP60 686 aa14.74□□□□□ -0.05
DDX4-201ENST00000353507 ANKARQ7Z5J8 1434 aa14.74□□□□□ -0.05
DDX4-201ENST00000353507 ABTB2Q8N961 1025 aa14.74□□□□□ -0.05
DDX4-201ENST00000353507 ARHGAP23Q9P227 1491 aa14.74□□□□□ -0.05
DDX4-201ENST00000353507 NWD1Q149M9 1564 aa14.74□□□□□ -0.05
DDX4-201ENST00000353507 MBD3O95983 291 aa14.73□□□□□ -0.05
DDX4-201ENST00000353507 MSNP26038 577 aaKnown RBP14.73□□□□□ -0.05
DDX4-201ENST00000353507 ZSCAN30Q86W11 494 aa14.73□□□□□ -0.05
DDX4-201ENST00000353507 USP44Q9H0E7 712 aa14.73□□□□□ -0.05
DDX4-201ENST00000353507 MARF1Q9Y4F3 1742 aaKnown RBP14.73□□□□□ -0.05
DDX4-201ENST00000353507 CUL4AQ13619 759 aa14.73□□□□□ -0.05
DDX4-201ENST00000353507 PRIM1P49642 420 aaKnown RBP14.73□□□□□ -0.05
DDX4-201ENST00000353507 SURF6O75683 361 aaKnown RBP14.72□□□□□ -0.05
DDX4-201ENST00000353507 NUTM1Q86Y26 1132 aa14.72□□□□□ -0.05
DDX4-201ENST00000353507 UNC5CLQ8IV45 518 aa14.72□□□□□ -0.05
DDX4-201ENST00000353507 USHBP1Q8N6Y0 703 aa14.72□□□□□ -0.05
DDX4-201ENST00000353507 INTS4Q96HW7 963 aaKnown RBP14.72□□□□□ -0.05
DDX4-201ENST00000353507 CHAMP1Q96JM3 812 aa14.72□□□□□ -0.05
DDX4-201ENST00000353507 RBSNQ9H1K0 784 aa14.72□□□□□ -0.05
DDX4-201ENST00000353507 RAB11FIP3O75154 756 aa14.72□□□□□ -0.05
DDX4-201ENST00000353507 BRD1O95696 1058 aa14.72□□□□□ -0.05
DDX4-201ENST00000353507 PRKCSHP14314 528 aaPredicted RBP14.72□□□□□ -0.05
DDX4-201ENST00000353507 SSH3Q8TE77 659 aa14.72□□□□□ -0.05
DDX4-201ENST00000353507 UPF3BQ9BZI7 483 aaKnown RBP14.72□□□□□ -0.05
DDX4-201ENST00000353507 PHAXQ9H814 394 aaKnown RBP14.72□□□□□ -0.05
DDX4-201ENST00000353507 USP54Q70EL1 1684 aa14.71□□□□□ -0.05
DDX4-201ENST00000353507 SYCE3A1L190 88 aa14.71□□□□□ -0.06
DDX4-201ENST00000353507 EIF2S2P20042 333 aaKnown RBP14.71□□□□□ -0.06
DDX4-201ENST00000353507 LRSAM1Q6UWE0 723 aa14.71□□□□□ -0.06
DDX4-201ENST00000353507 PPP1R42Q7Z4L9 355 aa14.71□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms