RNA–Protein interactions for RNA: ENST00000350148.9

SMAD9-201, Transcript of SMAD family member 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMAD9, Length 5,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-201ENST00000350148 MYL6BP14649 208 aa14.7□□□□□ -0.06
SMAD9-201ENST00000350148 LRRC59Q96AG4 307 aaKnown RBP14.7□□□□□ -0.06
SMAD9-201ENST00000350148 ROBO2Q9HCK4 1378 aa14.7□□□□□ -0.06
SMAD9-201ENST00000350148 NEUROD6Q96NK8 337 aa14.69□□□□□ -0.06
SMAD9-201ENST00000350148 ZCRB1Q8TBF4 217 aaKnown RBP14.69□□□□□ -0.06
SMAD9-201ENST00000350148 CLTCQ00610 1675 aaKnown RBP14.69□□□□□ -0.06
SMAD9-201ENST00000350148 CCDC158Q5M9N0 1113 aa14.69□□□□□ -0.06
SMAD9-201ENST00000350148 VPS37DQ86XT2 251 aa14.69□□□□□ -0.06
SMAD9-201ENST00000350148 NRDCO43847 1150 aa14.69□□□□□ -0.06
SMAD9-201ENST00000350148 SYNE3Q6ZMZ3 975 aa14.69□□□□□ -0.06
SMAD9-201ENST00000350148 AEBP1Q8IUX7 1158 aa14.69□□□□□ -0.06
SMAD9-201ENST00000350148 RNF123Q5XPI4 1314 aa14.69□□□□□ -0.06
SMAD9-201ENST00000350148 TRDNQ13061 729 aa14.68□□□□□ -0.06
SMAD9-201ENST00000350148 FSD1Q9BTV5 496 aa14.68□□□□□ -0.06
SMAD9-201ENST00000350148 ZNF652Q9Y2D9 606 aa14.68□□□□□ -0.06
SMAD9-201ENST00000350148 USP6P35125 1406 aa14.68□□□□□ -0.06
SMAD9-201ENST00000350148 TBC1D2BQ9UPU7 963 aa14.68□□□□□ -0.06
SMAD9-201ENST00000350148 MED14O60244 1454 aa14.68□□□□□ -0.06
SMAD9-201ENST00000350148 FAM83GA6ND36 823 aa14.68□□□□□ -0.06
SMAD9-201ENST00000350148 ALDH1L1O75891 902 aa14.68□□□□□ -0.06
SMAD9-201ENST00000350148 NRXN1Q9ULB1 1477 aa14.68□□□□□ -0.06
SMAD9-201ENST00000350148 CCDC57Q2TAC2 916 aa14.68□□□□□ -0.06
SMAD9-201ENST00000350148 VAMP4O75379 141 aa14.67□□□□□ -0.06
SMAD9-201ENST00000350148 CDCA7Q9BWT1 371 aaPredicted RBP14.67□□□□□ -0.06
SMAD9-201ENST00000350148 FBLN1P23142 703 aa14.67□□□□□ -0.06
SMAD9-201ENST00000350148 PIP4K2BP78356 416 aa14.67□□□□□ -0.06
SMAD9-201ENST00000350148 ZSCAN25Q6NSZ9 544 aa14.67□□□□□ -0.06
SMAD9-201ENST00000350148 DCAF5Q96JK2 942 aa14.67□□□□□ -0.06
SMAD9-201ENST00000350148 NEXMIFQ5QGS0 1516 aa14.66□□□□□ -0.06
SMAD9-201ENST00000350148 PDE4CQ08493 712 aa14.66□□□□□ -0.06
SMAD9-201ENST00000350148 GNL3LQ9NVN8 582 aaKnown RBP14.66□□□□□ -0.06
SMAD9-201ENST00000350148 BCORL1Q5H9F3 1711 aa14.66□□□□□ -0.06
SMAD9-201ENST00000350148 FAM184AQ8NB25 1140 aa14.66□□□□□ -0.06
SMAD9-201ENST00000350148 KIAA0232Q92628 1395 aa14.66□□□□□ -0.06
SMAD9-201ENST00000350148 PHACTR3Q96KR7 559 aa14.65□□□□□ -0.06
SMAD9-201ENST00000350148 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.65□□□□□ -0.06
SMAD9-201ENST00000350148 CDK12Q9NYV4 1490 aaPredicted RBP14.65□□□□□ -0.06
SMAD9-201ENST00000350148 QRICH2Q9H0J4 1663 aa14.65□□□□□ -0.06
SMAD9-201ENST00000350148 IL2RBP14784 551 aa14.65□□□□□ -0.06
SMAD9-201ENST00000350148 HSPA2P54652 639 aa14.65□□□□□ -0.06
SMAD9-201ENST00000350148 DNAJC5Q9H3Z4 198 aa14.65□□□□□ -0.06
SMAD9-201ENST00000350148 GLRX3O76003 335 aaKnown RBP14.65□□□□□ -0.06
SMAD9-201ENST00000350148 AKAP2Q9Y2D5 859 aa14.64□□□□□ -0.07
SMAD9-201ENST00000350148 CNNM1Q9NRU3 951 aa14.64□□□□□ -0.07
SMAD9-201ENST00000350148 CEP126Q9P2H0 1117 aa14.64□□□□□ -0.07
SMAD9-201ENST00000350148 PCDH11XQ9BZA7 1347 aa14.64□□□□□ -0.07
SMAD9-201ENST00000350148 PCDH11YQ9BZA8 1340 aa14.64□□□□□ -0.07
SMAD9-201ENST00000350148 REREQ9P2R6 1566 aa14.64□□□□□ -0.07
SMAD9-201ENST00000350148 CHL1O00533 1208 aa14.63□□□□□ -0.07
SMAD9-201ENST00000350148 TRIM35Q9UPQ4 493 aa14.63□□□□□ -0.07
SMAD9-201ENST00000350148 C8orf58Q8NAV2 365 aa14.63□□□□□ -0.07
SMAD9-201ENST00000350148 TOMM22Q9NS69 142 aa14.63□□□□□ -0.07
SMAD9-201ENST00000350148 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.63□□□□□ -0.07
SMAD9-201ENST00000350148 H3BQV1 296 aa14.63□□□□□ -0.07
SMAD9-201ENST00000350148 TTC39AQ5SRH9 613 aa14.63□□□□□ -0.07
SMAD9-201ENST00000350148 IFFO2Q5TF58 517 aa14.63□□□□□ -0.07
SMAD9-201ENST00000350148 A0A087WZG4 1122 aa14.63□□□□□ -0.07
SMAD9-201ENST00000350148 RNMTO43148 476 aaKnown RBP14.63□□□□□ -0.07
SMAD9-201ENST00000350148 PDIA4P13667 645 aaKnown RBP14.63□□□□□ -0.07
SMAD9-201ENST00000350148 CHRNA2Q15822 529 aa14.63□□□□□ -0.07
SMAD9-201ENST00000350148 MX1P20591 662 aa14.62□□□□□ -0.07
SMAD9-201ENST00000350148 AACSQ86V21 672 aa14.62□□□□□ -0.07
SMAD9-201ENST00000350148 ORAI2Q96SN7 254 aa14.62□□□□□ -0.07
SMAD9-201ENST00000350148 MYD88Q99836 296 aa14.62□□□□□ -0.07
SMAD9-201ENST00000350148 POLR1AO95602 1720 aaPredicted RBP14.62□□□□□ -0.07
SMAD9-201ENST00000350148 PREX1Q8TCU6 1659 aa14.62□□□□□ -0.07
SMAD9-201ENST00000350148 SPATA31D1Q6ZQQ2 1576 aa14.62□□□□□ -0.07
SMAD9-201ENST00000350148 PTCH1Q13635 1447 aa14.62□□□□□ -0.07
SMAD9-201ENST00000350148 ANKRD44Q8N8A2 993 aa14.62□□□□□ -0.07
SMAD9-201ENST00000350148 SMARCC1Q92922 1105 aaPredicted RBP14.62□□□□□ -0.07
SMAD9-201ENST00000350148 BMP2KLQ5H9B9 411 aa14.61□□□□□ -0.07
SMAD9-201ENST00000350148 CWC22Q9HCG8 908 aaKnown RBP14.61□□□□□ -0.07
SMAD9-201ENST00000350148 TULP4Q9NRJ4 1543 aa14.61□□□□□ -0.07
SMAD9-201ENST00000350148 AKAP17AQ02040 695 aaKnown RBP14.61□□□□□ -0.07
SMAD9-201ENST00000350148 ANKRD1Q15327 319 aa14.61□□□□□ -0.07
SMAD9-201ENST00000350148 PIK3C2BO00750 1634 aa14.61□□□□□ -0.07
SMAD9-201ENST00000350148 GOLGA6L3A6NEY3 463 aa14.61□□□□□ -0.07
SMAD9-201ENST00000350148 NOL8Q76FK4 1167 aaKnown RBP14.61□□□□□ -0.07
SMAD9-201ENST00000350148 RALYLQ86SE5 291 aaKnown RBP14.61□□□□□ -0.07
SMAD9-201ENST00000350148 KSR2Q6VAB6 950 aa14.61□□□□□ -0.07
SMAD9-201ENST00000350148 SMC3Q9UQE7 1217 aa14.61□□□□□ -0.07
SMAD9-201ENST00000350148 WASHC4Q2M389 1173 aa14.6□□□□□ -0.07
SMAD9-201ENST00000350148 UBE2Q2Q8WVN8 375 aa14.6□□□□□ -0.07
SMAD9-201ENST00000350148 MAP3K2Q9Y2U5 619 aa14.6□□□□□ -0.07
SMAD9-201ENST00000350148 LRRFIP2Q9Y608 721 aaKnown RBP14.6□□□□□ -0.07
SMAD9-201ENST00000350148 ERICH2A1L162 156 aa14.6□□□□□ -0.07
SMAD9-201ENST00000350148 NUCB1Q02818 461 aa14.59□□□□□ -0.07
SMAD9-201ENST00000350148 NGLY1Q96IV0 654 aa14.59□□□□□ -0.07
SMAD9-201ENST00000350148 LMTK3Q96Q04 1460 aa14.59□□□□□ -0.07
SMAD9-201ENST00000350148 F6X3S4 739 aa14.59□□□□□ -0.07
SMAD9-201ENST00000350148 MPHOSPH8Q99549 860 aa14.59□□□□□ -0.07
SMAD9-201ENST00000350148 TMEM94Q12767 1356 aa14.59□□□□□ -0.07
SMAD9-201ENST00000350148 TPM4P67936 248 aa14.59□□□□□ -0.07
SMAD9-201ENST00000350148 CWC25Q9NXE8 425 aaPredicted RBP14.59□□□□□ -0.07
SMAD9-201ENST00000350148 SLAIN2Q9P270 581 aa14.59□□□□□ -0.07
SMAD9-201ENST00000350148 IQGAP1P46940 1657 aa14.59□□□□□ -0.07
SMAD9-201ENST00000350148 PTCD1O75127 700 aaKnown RBP14.59□□□□□ -0.07
SMAD9-201ENST00000350148 KRT32Q14532 448 aa14.59□□□□□ -0.07
SMAD9-201ENST00000350148 TPRNQ4KMQ1 711 aa14.59□□□□□ -0.07
SMAD9-201ENST00000350148 TRMT2AQ8IZ69 625 aaKnown RBP14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms