RNA–Protein interactions for RNA: ENST00000349748.7

CAPN3-203, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-203ENST00000349748 GOLGA6L6A8MZA4 724 aa12.77□□□□□ -0.37
CAPN3-203ENST00000349748 CEBPAP49715 358 aaPredicted RBP12.77□□□□□ -0.37
CAPN3-203ENST00000349748 NUTM2DQ5VT03 806 aaPredicted RBP12.77□□□□□ -0.37
CAPN3-203ENST00000349748 CREBRFQ8IUR6 639 aa12.77□□□□□ -0.37
CAPN3-203ENST00000349748 JRKLQ9Y4A0 524 aa12.77□□□□□ -0.37
CAPN3-203ENST00000349748 ST5P78524 1137 aa12.76□□□□□ -0.37
CAPN3-203ENST00000349748 CTR9Q6PD62 1173 aa12.76□□□□□ -0.37
CAPN3-203ENST00000349748 E2F4Q16254 413 aa12.76□□□□□ -0.37
CAPN3-203ENST00000349748 ANKRD45Q5TZF3 282 aa12.76□□□□□ -0.37
CAPN3-203ENST00000349748 ATG3Q9NT62 314 aa12.76□□□□□ -0.37
CAPN3-203ENST00000349748 LRRFIP2Q9Y608 721 aaKnown RBP12.76□□□□□ -0.37
CAPN3-203ENST00000349748 MUM1L1Q5H9M0 696 aa12.75□□□□□ -0.37
CAPN3-203ENST00000349748 EXOC6BQ9Y2D4 811 aa12.75□□□□□ -0.37
CAPN3-203ENST00000349748 TRIM27P14373 513 aa12.75□□□□□ -0.37
CAPN3-203ENST00000349748 EGFL6Q8IUX8 553 aa12.75□□□□□ -0.37
CAPN3-203ENST00000349748 USP26Q9BXU7 913 aa12.75□□□□□ -0.37
CAPN3-203ENST00000349748 PAXBP1Q9Y5B6 917 aa12.75□□□□□ -0.37
CAPN3-203ENST00000349748 BMS1Q14692 1282 aaKnown RBP12.74□□□□□ -0.37
CAPN3-203ENST00000349748 CFAP65Q6ZU64 1925 aaKnown RBP12.74□□□□□ -0.37
CAPN3-203ENST00000349748 NPATQ14207 1427 aa12.74□□□□□ -0.37
CAPN3-203ENST00000349748 ZSCAN26Q16670 478 aa12.74□□□□□ -0.37
CAPN3-203ENST00000349748 TPD52L1Q16890 204 aaPredicted RBP12.74□□□□□ -0.37
CAPN3-203ENST00000349748 CCDC186Q7Z3E2 898 aa12.74□□□□□ -0.37
CAPN3-203ENST00000349748 USP48Q86UV5 1035 aa12.74□□□□□ -0.37
CAPN3-203ENST00000349748 SMARCE1Q969G3 411 aa12.74□□□□□ -0.37
CAPN3-203ENST00000349748 BRMS1Q9HCU9 246 aa12.74□□□□□ -0.37
CAPN3-203ENST00000349748 STAG3Q9UJ98 1225 aa12.74□□□□□ -0.37
CAPN3-203ENST00000349748 FHOD1Q9Y613 1164 aa12.74□□□□□ -0.37
CAPN3-203ENST00000349748 ARHGEF40Q8TER5 1519 aa12.73□□□□□ -0.37
CAPN3-203ENST00000349748 MADDQ8WXG6 1647 aa12.73□□□□□ -0.37
CAPN3-203ENST00000349748 IQGAP1P46940 1657 aa12.73□□□□□ -0.37
CAPN3-203ENST00000349748 PLA2G4AP47712 749 aa12.73□□□□□ -0.37
CAPN3-203ENST00000349748 CEP135Q66GS9 1140 aa12.73□□□□□ -0.37
CAPN3-203ENST00000349748 PACS2Q86VP3 889 aa12.73□□□□□ -0.37
CAPN3-203ENST00000349748 TXLNBQ8N3L3 684 aa12.73□□□□□ -0.37
CAPN3-203ENST00000349748 FAM212AQ96EL1 285 aa12.73□□□□□ -0.37
CAPN3-203ENST00000349748 NRBP1Q9UHY1 535 aa12.73□□□□□ -0.37
CAPN3-203ENST00000349748 SIGLEC1Q9BZZ2 1709 aa12.73□□□□□ -0.37
CAPN3-203ENST00000349748 MROH1Q8NDA8 1641 aa12.73□□□□□ -0.37
CAPN3-203ENST00000349748 ERBB3P21860 1342 aa12.72□□□□□ -0.37
CAPN3-203ENST00000349748 TPM3P06753 285 aa12.72□□□□□ -0.37
CAPN3-203ENST00000349748 GIMAP6Q6P9H5 292 aa12.72□□□□□ -0.37
CAPN3-203ENST00000349748 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.72□□□□□ -0.37
CAPN3-203ENST00000349748 DDX19BQ9UMR2 479 aa12.72□□□□□ -0.37
CAPN3-203ENST00000349748 UGGT1Q9NYU2 1555 aa12.72□□□□□ -0.37
CAPN3-203ENST00000349748 CDC45O75419 566 aa12.72□□□□□ -0.37
CAPN3-203ENST00000349748 BRD1O95696 1058 aa12.72□□□□□ -0.37
CAPN3-203ENST00000349748 IDI1Q13907 227 aa12.72□□□□□ -0.37
CAPN3-203ENST00000349748 CCDC183Q5T5S1 534 aa12.72□□□□□ -0.37
CAPN3-203ENST00000349748 ZCCHC17Q9NP64 241 aaKnown RBP12.72□□□□□ -0.37
CAPN3-203ENST00000349748 STK26Q9P289 416 aa12.72□□□□□ -0.37
CAPN3-203ENST00000349748 RRP15Q9Y3B9 282 aaKnown RBP12.72□□□□□ -0.37
CAPN3-203ENST00000349748 PTPRCP08575 1304 aa12.71□□□□□ -0.37
CAPN3-203ENST00000349748 ST18O60284 1047 aa12.71□□□□□ -0.37
CAPN3-203ENST00000349748 SRLQ86TD4 932 aa12.71□□□□□ -0.37
CAPN3-203ENST00000349748 TMEM57Q8N5G2 664 aa12.71□□□□□ -0.37
CAPN3-203ENST00000349748 MYOM1P52179 1685 aa12.71□□□□□ -0.37
CAPN3-203ENST00000349748 PIK3C2GO75747 1445 aa12.71□□□□□ -0.38
CAPN3-203ENST00000349748 NOL8Q76FK4 1167 aaKnown RBP12.71□□□□□ -0.38
CAPN3-203ENST00000349748 ABCC3O15438 1527 aa12.71□□□□□ -0.38
CAPN3-203ENST00000349748 ASXL1Q8IXJ9 1541 aa12.71□□□□□ -0.38
CAPN3-203ENST00000349748 PNMA6AP0CW24 399 aaPredicted RBP12.7□□□□□ -0.38
CAPN3-203ENST00000349748 CNKSR2Q8WXI2 1034 aa12.7□□□□□ -0.38
CAPN3-203ENST00000349748 CXorf56Q9H5V9 222 aa12.7□□□□□ -0.38
CAPN3-203ENST00000349748 ZBTB40Q9NUA8 1239 aa12.7□□□□□ -0.38
CAPN3-203ENST00000349748 TEX35Q5T0J7 233 aa12.7□□□□□ -0.38
CAPN3-203ENST00000349748 SYNMO15061 1565 aa12.7□□□□□ -0.38
CAPN3-203ENST00000349748 USP27XA6NNY8 438 aa12.69□□□□□ -0.38
CAPN3-203ENST00000349748 TTC31Q49AM3 519 aaPredicted RBP12.69□□□□□ -0.38
CAPN3-203ENST00000349748 A0A1B0GUL7 405 aa12.69□□□□□ -0.38
CAPN3-203ENST00000349748 ATP2B1P20020 1258 aa12.69□□□□□ -0.38
CAPN3-203ENST00000349748 DRC7Q8IY82 874 aa12.69□□□□□ -0.38
CAPN3-203ENST00000349748 CEP152O94986 1710 aa12.69□□□□□ -0.38
CAPN3-203ENST00000349748 GSPT1P15170 499 aaKnown RBP12.69□□□□□ -0.38
CAPN3-203ENST00000349748 CLCN6P51797 869 aa12.69□□□□□ -0.38
CAPN3-203ENST00000349748 ERCC6LQ2NKX8 1250 aa12.69□□□□□ -0.38
CAPN3-203ENST00000349748 TCP11L2Q8N4U5 519 aa12.69□□□□□ -0.38
CAPN3-203ENST00000349748 GOLGA6L1Q8N7Z2 621 aa12.69□□□□□ -0.38
CAPN3-203ENST00000349748 TSR2Q969E8 191 aaKnown RBP12.69□□□□□ -0.38
CAPN3-203ENST00000349748 SUFUQ9UMX1 484 aa12.69□□□□□ -0.38
CAPN3-203ENST00000349748 DEPDC5O75140 1603 aa12.68□□□□□ -0.38
CAPN3-203ENST00000349748 MX1P20591 662 aa12.68□□□□□ -0.38
CAPN3-203ENST00000349748 SATB1Q01826 763 aa12.68□□□□□ -0.38
CAPN3-203ENST00000349748 GRIPAP1Q4V328 841 aa12.68□□□□□ -0.38
CAPN3-203ENST00000349748 FAM43BQ6ZT52 329 aaPredicted RBP12.68□□□□□ -0.38
CAPN3-203ENST00000349748 ERO1AQ96HE7 468 aa12.68□□□□□ -0.38
CAPN3-203ENST00000349748 C1orf115Q9H7X2 142 aa12.68□□□□□ -0.38
CAPN3-203ENST00000349748 DONSONQ9NYP3 566 aa12.68□□□□□ -0.38
CAPN3-203ENST00000349748 IRF6O14896 467 aa12.68□□□□□ -0.38
CAPN3-203ENST00000349748 SLFNL1Q499Z3 407 aa12.68□□□□□ -0.38
CAPN3-203ENST00000349748 LRRN4CLQ8ND94 238 aa12.68□□□□□ -0.38
CAPN3-203ENST00000349748 VWDEQ8N2E2 1590 aa12.67□□□□□ -0.38
CAPN3-203ENST00000349748 SCAF11Q99590 1463 aaKnown RBP12.67□□□□□ -0.38
CAPN3-203ENST00000349748 ZSCAN25Q6NSZ9 544 aa12.67□□□□□ -0.38
CAPN3-203ENST00000349748 TMX3Q96JJ7 454 aa12.67□□□□□ -0.38
CAPN3-203ENST00000349748 DEF6Q9H4E7 631 aa12.67□□□□□ -0.38
CAPN3-203ENST00000349748 NOB1Q9ULX3 412 aaKnown RBP12.67□□□□□ -0.38
CAPN3-203ENST00000349748 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.67□□□□□ -0.38
CAPN3-203ENST00000349748 EFCAB6Q5THR3 1501 aa12.67□□□□□ -0.38
CAPN3-203ENST00000349748 SPHKAPQ2M3C7 1700 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms