RNA–Protein interactions for RNA: ENST00000349663.6

KDM5C-201, Transcript of lysine demethylase 5C, humanhuman

TSL 4

Gene KDM5C, Length 548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM5C-201ENST00000349663 TRAPPC3LQ5T215 181 aa25.66■■□□□ 1.7
KDM5C-201ENST00000349663 POLKQ9UBT6 870 aa25.66■■□□□ 1.7
KDM5C-201ENST00000349663 TGFB2P61812 414 aa25.65■■□□□ 1.7
KDM5C-201ENST00000349663 NLGN1Q8N2Q7 840 aa25.65■■□□□ 1.7
KDM5C-201ENST00000349663 RTCBQ9Y3I0 505 aaKnown RBP25.65■■□□□ 1.7
KDM5C-201ENST00000349663 A0A0G2JLW4 131 aa25.62■■□□□ 1.69
KDM5C-201ENST00000349663 BCS1LQ9Y276 419 aa25.62■■□□□ 1.69
KDM5C-201ENST00000349663 ERVV-2B6SEH9 535 aa25.61■■□□□ 1.69
KDM5C-201ENST00000349663 EIF4A2Q14240 407 aaKnown RBP25.61■■□□□ 1.69
KDM5C-201ENST00000349663 RBM42Q9BTD8 480 aaKnown RBP25.61■■□□□ 1.69
KDM5C-201ENST00000349663 PXDNLA1KZ92 1463 aa25.6■■□□□ 1.69
KDM5C-201ENST00000349663 RC3H1Q5TC82 1133 aaKnown RBP25.6■■□□□ 1.69
KDM5C-201ENST00000349663 ARHGEF1Q92888 912 aaKnown RBP25.6■■□□□ 1.69
KDM5C-201ENST00000349663 SLC4A9Q96Q91 983 aa25.6■■□□□ 1.69
KDM5C-201ENST00000349663 ANKRD26Q9UPS8 1709 aa25.6■■□□□ 1.69
KDM5C-201ENST00000349663 ADRA2BP18089 450 aa25.59■■□□□ 1.69
KDM5C-201ENST00000349663 ARHGAP27Q6ZUM4 889 aa25.59■■□□□ 1.69
KDM5C-201ENST00000349663 TNNT2P45379 298 aaPredicted RBP25.58■■□□□ 1.69
KDM5C-201ENST00000349663 APLP1P51693 650 aa25.58■■□□□ 1.69
KDM5C-201ENST00000349663 CCDC87Q9NVE4 849 aa25.58■■□□□ 1.69
KDM5C-201ENST00000349663 CICQ96RK0 1608 aaPredicted RBP25.58■■□□□ 1.69
KDM5C-201ENST00000349663 KDRP35968 1356 aa25.57■■□□□ 1.68
KDM5C-201ENST00000349663 PLEKHG2Q9H7P9 1386 aa25.57■■□□□ 1.68
KDM5C-201ENST00000349663 TOMM70O94826 608 aa25.57■■□□□ 1.68
KDM5C-201ENST00000349663 HSP90AB1P08238 724 aaKnown RBP25.57■■□□□ 1.68
KDM5C-201ENST00000349663 RFC4P35249 363 aa25.57■■□□□ 1.68
KDM5C-201ENST00000349663 DCAF5Q96JK2 942 aa25.57■■□□□ 1.68
KDM5C-201ENST00000349663 GYS1P13807 737 aa25.56■■□□□ 1.68
KDM5C-201ENST00000349663 DPEP1P16444 411 aa25.56■■□□□ 1.68
KDM5C-201ENST00000349663 RPS6KA4O75676 772 aa25.55■■□□□ 1.68
KDM5C-201ENST00000349663 PARP3Q9Y6F1 533 aa25.55■■□□□ 1.68
KDM5C-201ENST00000349663 C10orf71Q711Q0 1435 aa25.54■■□□□ 1.68
KDM5C-201ENST00000349663 FCHSD2O94868 740 aa25.54■■□□□ 1.68
KDM5C-201ENST00000349663 PLEKHO1Q53GL0 409 aaPredicted RBP25.54■■□□□ 1.68
KDM5C-201ENST00000349663 CNTNAP4Q9C0A0 1308 aa25.54■■□□□ 1.68
KDM5C-201ENST00000349663 KIF13BQ9NQT8 1826 aa25.53■■□□□ 1.68
KDM5C-201ENST00000349663 CABP4P57796 275 aa25.52■■□□□ 1.68
KDM5C-201ENST00000349663 POLR3GLQ9BT43 218 aa25.52■■□□□ 1.68
KDM5C-201ENST00000349663 N4BP2Q86UW6 1770 aaPredicted RBP25.51■■□□□ 1.67
KDM5C-201ENST00000349663 AMOTQ4VCS5 1084 aa25.5■■□□□ 1.67
KDM5C-201ENST00000349663 ZNF530Q6P9A1 599 aaPredicted RBP25.5■■□□□ 1.67
KDM5C-201ENST00000349663 DNAJC5GQ8N7S2 189 aa25.5■■□□□ 1.67
KDM5C-201ENST00000349663 KIAA1551Q9HCM1 1747 aa25.5■■□□□ 1.67
KDM5C-201ENST00000349663 NMRK2Q9NPI5 230 aa25.5■■□□□ 1.67
KDM5C-201ENST00000349663 KCNA3P22001 575 aa25.49■■□□□ 1.67
KDM5C-201ENST00000349663 ZNF831Q5JPB2 1677 aa25.48■■□□□ 1.67
KDM5C-201ENST00000349663 MTHFSP49914 203 aa25.48■■□□□ 1.67
KDM5C-201ENST00000349663 PTCD1O75127 700 aaKnown RBP25.47■■□□□ 1.67
KDM5C-201ENST00000349663 C9orf131Q5VYM1 1079 aa25.47■■□□□ 1.67
KDM5C-201ENST00000349663 PIM2Q9P1W9 311 aa25.47■■□□□ 1.67
KDM5C-201ENST00000349663 TIMELESSQ9UNS1 1208 aa25.47■■□□□ 1.67
KDM5C-201ENST00000349663 C4AP0C0L4 1744 aa25.46■■□□□ 1.67
KDM5C-201ENST00000349663 KDM6AO15550 1401 aaPredicted RBP25.46■■□□□ 1.67
KDM5C-201ENST00000349663 CRKLP46109 303 aaKnown RBP25.45■■□□□ 1.66
KDM5C-201ENST00000349663 C1orf141Q5JVX7 400 aa25.45■■□□□ 1.66
KDM5C-201ENST00000349663 NFATC2IPQ8NCF5 419 aa25.45■■□□□ 1.66
KDM5C-201ENST00000349663 DALRD3Q5D0E6 543 aaKnown RBP25.44■■□□□ 1.66
KDM5C-201ENST00000349663 C16orf71Q8IYS4 520 aaPredicted RBP25.44■■□□□ 1.66
KDM5C-201ENST00000349663 RBM46Q8TBY0 533 aaKnown RBP25.44■■□□□ 1.66
KDM5C-201ENST00000349663 FKBP8Q14318 412 aa25.43■■□□□ 1.66
KDM5C-201ENST00000349663 SRP68Q9UHB9 627 aaKnown RBP25.43■■□□□ 1.66
KDM5C-201ENST00000349663 COL5A3P25940 1745 aaPredicted RBP25.43■■□□□ 1.66
KDM5C-201ENST00000349663 USP42Q9H9J4 1324 aaKnown RBP25.41■■□□□ 1.66
KDM5C-201ENST00000349663 AEBP1Q8IUX7 1158 aa25.41■■□□□ 1.66
KDM5C-201ENST00000349663 PANK3Q9H999 370 aa25.41■■□□□ 1.66
KDM5C-201ENST00000349663 MYH14Q7Z406 1995 aaKnown RBP25.41■■□□□ 1.66
KDM5C-201ENST00000349663 DDR1Q08345 913 aa25.4■■□□□ 1.66
KDM5C-201ENST00000349663 KDM2BQ8NHM5 1336 aa25.38■■□□□ 1.65
KDM5C-201ENST00000349663 FSTL1Q12841 308 aa25.38■■□□□ 1.65
KDM5C-201ENST00000349663 TRIM26Q12899 539 aaPredicted RBP25.38■■□□□ 1.65
KDM5C-201ENST00000349663 RNF181Q9P0P0 153 aa25.38■■□□□ 1.65
KDM5C-201ENST00000349663 BRCA1P38398 1863 aaKnown RBP25.38■■□□□ 1.65
KDM5C-201ENST00000349663 SULT6B1Q6IMI4 303 aa25.37■■□□□ 1.65
KDM5C-201ENST00000349663 INTS5Q6P9B9 1019 aaKnown RBP25.37■■□□□ 1.65
KDM5C-201ENST00000349663 TM4SF1P30408 202 aa25.36■■□□□ 1.65
KDM5C-201ENST00000349663 CHRNA5P30532 468 aa25.36■■□□□ 1.65
KDM5C-201ENST00000349663 MORC1Q86VD1 984 aa25.36■■□□□ 1.65
KDM5C-201ENST00000349663 PCNTO95613 3336 aa25.35■■□□□ 1.65
KDM5C-201ENST00000349663 ZPR1O75312 459 aa25.35■■□□□ 1.65
KDM5C-201ENST00000349663 ARFGEF1Q9Y6D6 1849 aa25.35■■□□□ 1.65
KDM5C-201ENST00000349663 POLRMTO00411 1230 aaKnown RBP25.34■■□□□ 1.65
KDM5C-201ENST00000349663 RRAGCQ9HB90 399 aa25.34■■□□□ 1.65
KDM5C-201ENST00000349663 HTRA3P83110 453 aa25.33■■□□□ 1.65
KDM5C-201ENST00000349663 KLRG1Q96E93 195 aa25.33■■□□□ 1.65
KDM5C-201ENST00000349663 KCPQ6ZWJ8 1503 aa25.32■■□□□ 1.64
KDM5C-201ENST00000349663 EIF4G2P78344 907 aaKnown RBP eCLIP25.31■■□□□ 1.64
KDM5C-201ENST00000349663 USPL1Q5W0Q7 1092 aa25.31■■□□□ 1.64
KDM5C-201ENST00000349663 DNAJC10Q8IXB1 793 aa25.31■■□□□ 1.64
KDM5C-201ENST00000349663 IL13P35225 146 aa25.3■■□□□ 1.64
KDM5C-201ENST00000349663 AKAP4Q5JQC9 854 aa25.3■■□□□ 1.64
KDM5C-201ENST00000349663 JMYQ8N9B5 988 aa25.29■■□□□ 1.64
KDM5C-201ENST00000349663 SLC52A2Q9HAB3 445 aa25.29■■□□□ 1.64
KDM5C-201ENST00000349663 WDR90Q96KV7 1748 aa25.29■■□□□ 1.64
KDM5C-201ENST00000349663 HSPA5P11021 654 aaKnown RBP25.28■■□□□ 1.64
KDM5C-201ENST00000349663 SOS1Q07889 1333 aaPredicted RBP25.28■■□□□ 1.64
KDM5C-201ENST00000349663 CYP19A1P11511 503 aaPredicted RBP25.27■■□□□ 1.64
KDM5C-201ENST00000349663 LGR6Q9HBX8 967 aa25.27■■□□□ 1.64
KDM5C-201ENST00000349663 TJP1Q07157 1748 aa25.26■■□□□ 1.63
KDM5C-201ENST00000349663 SMC1BQ8NDV3 1235 aa25.26■■□□□ 1.63
KDM5C-201ENST00000349663 NARFQ9UHQ1 456 aa25.26■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms