RNA–Protein interactions for RNA: ENST00000347652.6

VCAM1-202, Transcript of vascular cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene VCAM1, Length 2,812 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAM1-202ENST00000347652 PRDM11Q9NQV5 511 aa6.8□□□□□ -1.32
VCAM1-202ENST00000347652 SUGT1Q9Y2Z0 365 aa6.8□□□□□ -1.32
VCAM1-202ENST00000347652 SLIT3O75094 1523 aa6.8□□□□□ -1.32
VCAM1-202ENST00000347652 NRAPQ86VF7 1730 aa6.8□□□□□ -1.32
VCAM1-202ENST00000347652 GPR37O15354 613 aa6.8□□□□□ -1.32
VCAM1-202ENST00000347652 FOXD4L6Q3SYB3 417 aaPredicted RBP6.8□□□□□ -1.32
VCAM1-202ENST00000347652 ZNF772Q68DY9 489 aaPredicted RBP6.8□□□□□ -1.32
VCAM1-202ENST00000347652 FOXD4L3Q6VB84 417 aaPredicted RBP6.8□□□□□ -1.32
VCAM1-202ENST00000347652 CCDC102AQ96A19 550 aa6.8□□□□□ -1.32
VCAM1-202ENST00000347652 AXIN2Q9Y2T1 843 aa6.8□□□□□ -1.32
VCAM1-202ENST00000347652 ZC3H4Q9UPT8 1303 aaKnown RBP6.8□□□□□ -1.32
VCAM1-202ENST00000347652 CENPBP07199 599 aaPredicted RBP6.79□□□□□ -1.32
VCAM1-202ENST00000347652 MS4A1P11836 297 aa6.79□□□□□ -1.32
VCAM1-202ENST00000347652 SGSM3Q96HU1 749 aa6.79□□□□□ -1.32
VCAM1-202ENST00000347652 DRC1Q96MC2 740 aa6.79□□□□□ -1.32
VCAM1-202ENST00000347652 NFAT5O94916 1531 aa6.79□□□□□ -1.32
VCAM1-202ENST00000347652 CAMTA1Q9Y6Y1 1673 aa6.79□□□□□ -1.32
VCAM1-202ENST00000347652 RGPD5Q99666 1765 aa6.79□□□□□ -1.32
VCAM1-202ENST00000347652 ATRNO75882 1429 aa6.79□□□□□ -1.32
VCAM1-202ENST00000347652 UNC5CLQ8IV45 518 aa6.79□□□□□ -1.32
VCAM1-202ENST00000347652 CNPY4Q8N129 248 aa6.79□□□□□ -1.32
VCAM1-202ENST00000347652 STRN4Q9NRL3 753 aa6.79□□□□□ -1.32
VCAM1-202ENST00000347652 COL14A1Q05707 1796 aaKnown RBP6.79□□□□□ -1.32
VCAM1-202ENST00000347652 LMO7Q8WWI1 1683 aa6.79□□□□□ -1.32
VCAM1-202ENST00000347652 GLI3P10071 1580 aa6.78□□□□□ -1.32
VCAM1-202ENST00000347652 MYBBP1AQ9BQG0 1328 aaKnown RBP6.78□□□□□ -1.32
VCAM1-202ENST00000347652 DCAF8L1A6NGE4 600 aa6.78□□□□□ -1.32
VCAM1-202ENST00000347652 PPP2R1AP30153 589 aa6.78□□□□□ -1.32
VCAM1-202ENST00000347652 SREK1Q8WXA9 508 aaKnown RBP6.78□□□□□ -1.32
VCAM1-202ENST00000347652 AATKQ6ZMQ8 1374 aa6.78□□□□□ -1.32
VCAM1-202ENST00000347652 GPATCH3Q96I76 525 aa6.78□□□□□ -1.32
VCAM1-202ENST00000347652 SPINK5Q9NQ38 1064 aaPredicted RBP6.78□□□□□ -1.32
VCAM1-202ENST00000347652 COL18A1P39060 1754 aa6.78□□□□□ -1.32
VCAM1-202ENST00000347652 NWD2Q9ULI1 1742 aa6.78□□□□□ -1.32
VCAM1-202ENST00000347652 RGS12O14924 1447 aa6.78□□□□□ -1.32
VCAM1-202ENST00000347652 TNKS1BP1Q9C0C2 1729 aaKnown RBP6.78□□□□□ -1.32
VCAM1-202ENST00000347652 TCF3P15923 654 aa6.77□□□□□ -1.32
VCAM1-202ENST00000347652 RXRBP28702 533 aa6.77□□□□□ -1.32
VCAM1-202ENST00000347652 TNNT2P45379 298 aaPredicted RBP6.77□□□□□ -1.32
VCAM1-202ENST00000347652 ARHGEF25Q86VW2 580 aa6.77□□□□□ -1.32
VCAM1-202ENST00000347652 EXOC8Q8IYI6 725 aa6.77□□□□□ -1.32
VCAM1-202ENST00000347652 EVI5LQ96CN4 794 aa6.77□□□□□ -1.32
VCAM1-202ENST00000347652 SNRKQ9NRH2 765 aa6.77□□□□□ -1.32
VCAM1-202ENST00000347652 RYDENQ9NUL5 291 aaKnown RBP6.77□□□□□ -1.32
VCAM1-202ENST00000347652 TRPC5Q9UL62 973 aaPredicted RBP6.77□□□□□ -1.32
VCAM1-202ENST00000347652 LTN1O94822 1766 aa6.77□□□□□ -1.33
VCAM1-202ENST00000347652 CPDO75976 1380 aa6.77□□□□□ -1.33
VCAM1-202ENST00000347652 PEX14O75381 377 aa6.77□□□□□ -1.33
VCAM1-202ENST00000347652 RRS1Q15050 365 aaKnown RBP6.77□□□□□ -1.33
VCAM1-202ENST00000347652 SMYD5Q6GMV2 418 aa6.77□□□□□ -1.33
VCAM1-202ENST00000347652 LARP1Q6PKG0 1096 aaKnown RBP6.77□□□□□ -1.33
VCAM1-202ENST00000347652 KCNH5Q8NCM2 988 aa6.77□□□□□ -1.33
VCAM1-202ENST00000347652 GJD4Q96KN9 370 aaPredicted RBP6.77□□□□□ -1.33
VCAM1-202ENST00000347652 KLHL42Q9P2K6 505 aa6.77□□□□□ -1.33
VCAM1-202ENST00000347652 CCER2I3L3R5 266 aa6.77□□□□□ -1.33
VCAM1-202ENST00000347652 DCAF8Q5TAQ9 597 aa6.77□□□□□ -1.33
VCAM1-202ENST00000347652 REPIN1Q9BWE0 567 aaKnown RBP6.77□□□□□ -1.33
VCAM1-202ENST00000347652 COL5A2P05997 1499 aaPredicted RBP6.76□□□□□ -1.33
VCAM1-202ENST00000347652 NCLP19338 710 aaKnown RBP6.76□□□□□ -1.33
VCAM1-202ENST00000347652 NUBP1P53384 320 aa6.76□□□□□ -1.33
VCAM1-202ENST00000347652 RBM6P78332 1123 aaKnown RBP6.76□□□□□ -1.33
VCAM1-202ENST00000347652 PROCA1Q8NCQ7 364 aaPredicted RBP6.76□□□□□ -1.33
VCAM1-202ENST00000347652 POLKQ9UBT6 870 aa6.76□□□□□ -1.33
VCAM1-202ENST00000347652 SMG6Q86US8 1419 aaKnown RBP6.76□□□□□ -1.33
VCAM1-202ENST00000347652 ZNF16P17020 682 aaPredicted RBP6.76□□□□□ -1.33
VCAM1-202ENST00000347652 ANAPC15P60006 121 aa6.76□□□□□ -1.33
VCAM1-202ENST00000347652 VPS72Q15906 364 aa6.76□□□□□ -1.33
VCAM1-202ENST00000347652 FAM98CQ17RN3 349 aaKnown RBP6.76□□□□□ -1.33
VCAM1-202ENST00000347652 MAP3K19Q56UN5 1328 aa6.75□□□□□ -1.33
VCAM1-202ENST00000347652 MTHFSP49914 203 aa6.75□□□□□ -1.33
VCAM1-202ENST00000347652 CCDC184Q52MB2 194 aa6.75□□□□□ -1.33
VCAM1-202ENST00000347652 FAM43BQ6ZT52 329 aaPredicted RBP6.75□□□□□ -1.33
VCAM1-202ENST00000347652 CALR3Q96L12 384 aaKnown RBP6.75□□□□□ -1.33
VCAM1-202ENST00000347652 PEAK1Q9H792 1746 aa6.75□□□□□ -1.33
VCAM1-202ENST00000347652 SRCAPQ6ZRS2 3230 aa6.75□□□□□ -1.33
VCAM1-202ENST00000347652 BRWD3Q6RI45 1802 aa6.75□□□□□ -1.33
VCAM1-202ENST00000347652 TPD52L2O43399 206 aaKnown RBP6.75□□□□□ -1.33
VCAM1-202ENST00000347652 FAM9BQ8IZU0 186 aa6.75□□□□□ -1.33
VCAM1-202ENST00000347652 GLMNQ92990 594 aa6.75□□□□□ -1.33
VCAM1-202ENST00000347652 PLCD4Q9BRC7 762 aa6.75□□□□□ -1.33
VCAM1-202ENST00000347652 EMILIN1Q9Y6C2 1016 aa6.75□□□□□ -1.33
VCAM1-202ENST00000347652 INSRP06213 1382 aa6.75□□□□□ -1.33
VCAM1-202ENST00000347652 SPATA31A5Q5VU36 1347 aa6.74□□□□□ -1.33
VCAM1-202ENST00000347652 SPATA31A7Q8IWB4 1347 aa6.74□□□□□ -1.33
VCAM1-202ENST00000347652 MAP2P11137 1827 aaKnown RBP6.74□□□□□ -1.33
VCAM1-202ENST00000347652 FECHP22830 423 aa6.74□□□□□ -1.33
VCAM1-202ENST00000347652 EVA1CP58658 441 aa6.74□□□□□ -1.33
VCAM1-202ENST00000347652 FAM182BQ5T319 152 aa6.74□□□□□ -1.33
VCAM1-202ENST00000347652 PCMTD1Q96MG8 357 aaPredicted RBP6.74□□□□□ -1.33
VCAM1-202ENST00000347652 KIF24Q5T7B8 1368 aa6.74□□□□□ -1.33
VCAM1-202ENST00000347652 LTV1Q96GA3 475 aaPredicted RBP6.74□□□□□ -1.33
VCAM1-202ENST00000347652 GDPD2Q9HCC8 539 aa6.74□□□□□ -1.33
VCAM1-202ENST00000347652 SPATA31A1Q5TZJ5 1347 aa6.74□□□□□ -1.33
VCAM1-202ENST00000347652 MAP4K4O95819 1239 aaPredicted RBP6.73□□□□□ -1.33
VCAM1-202ENST00000347652 TTLL12Q14166 644 aaPredicted RBP6.73□□□□□ -1.33
VCAM1-202ENST00000347652 COL3A1P02461 1466 aaPredicted RBP6.73□□□□□ -1.33
VCAM1-202ENST00000347652 RGPD2P0DJD1 1756 aa6.73□□□□□ -1.33
VCAM1-202ENST00000347652 CDK12Q9NYV4 1490 aaPredicted RBP6.73□□□□□ -1.33
VCAM1-202ENST00000347652 RTL1A6NKG5 1358 aa6.73□□□□□ -1.33
VCAM1-202ENST00000347652 A0A0G2JS52 829 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms