RNA–Protein interactions for RNA: ENST00000346416.6

CDK5RAP1-202, Transcript of CDK5 regulatory subunit associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP1, Length 2,122 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1-202ENST00000346416 DDRGK1Q96HY6 314 aa17.72■□□□□ 0.43
CDK5RAP1-202ENST00000346416 NLRP2Q9NX02 1062 aa17.72■□□□□ 0.43
CDK5RAP1-202ENST00000346416 RNMTO43148 476 aaKnown RBP17.72■□□□□ 0.43
CDK5RAP1-202ENST00000346416 EIF4A1P60842 406 aaKnown RBP17.72■□□□□ 0.43
CDK5RAP1-202ENST00000346416 ANKRD45Q5TZF3 282 aa17.72■□□□□ 0.43
CDK5RAP1-202ENST00000346416 MEIS3Q99687 375 aa17.72■□□□□ 0.43
CDK5RAP1-202ENST00000346416 COL18A1P39060 1754 aa17.71■□□□□ 0.43
CDK5RAP1-202ENST00000346416 BTBD11A6QL63 1104 aa17.71■□□□□ 0.43
CDK5RAP1-202ENST00000346416 CCT4P50991 539 aaKnown RBP17.71■□□□□ 0.43
CDK5RAP1-202ENST00000346416 FKBP5Q13451 457 aaPredicted RBP17.71■□□□□ 0.43
CDK5RAP1-202ENST00000346416 HDGFL1Q5TGJ6 251 aa17.71■□□□□ 0.43
CDK5RAP1-202ENST00000346416 KDM3BQ7LBC6 1761 aa17.71■□□□□ 0.43
CDK5RAP1-202ENST00000346416 CHRNA2Q15822 529 aa17.71■□□□□ 0.42
CDK5RAP1-202ENST00000346416 SLAIN2Q9P270 581 aa17.71■□□□□ 0.42
CDK5RAP1-202ENST00000346416 KCNQ3O43525 872 aa17.7■□□□□ 0.42
CDK5RAP1-202ENST00000346416 RAPGEF4Q8WZA2 1011 aa17.7■□□□□ 0.42
CDK5RAP1-202ENST00000346416 ATP10DQ9P241 1426 aa17.7■□□□□ 0.42
CDK5RAP1-202ENST00000346416 CRYBG1Q9Y4K1 1723 aa17.69■□□□□ 0.42
CDK5RAP1-202ENST00000346416 OVOS2A0A0G2JMS6 1433 aa17.69■□□□□ 0.42
CDK5RAP1-202ENST00000346416 RPAP2Q8IXW5 612 aaPredicted RBP17.69■□□□□ 0.42
CDK5RAP1-202ENST00000346416 ANKRD44Q8N8A2 993 aa17.69■□□□□ 0.42
CDK5RAP1-202ENST00000346416 HOXB7P09629 217 aa17.68■□□□□ 0.42
CDK5RAP1-202ENST00000346416 CSB-PGBD3P0DP91 1061 aa17.68■□□□□ 0.42
CDK5RAP1-202ENST00000346416 CEP85Q6P2H3 762 aa17.68■□□□□ 0.42
CDK5RAP1-202ENST00000346416 DCTPP1Q9H773 170 aa17.68■□□□□ 0.42
CDK5RAP1-202ENST00000346416 CPDO75976 1380 aa17.68■□□□□ 0.42
CDK5RAP1-202ENST00000346416 EIF2S2P20042 333 aaKnown RBP17.67■□□□□ 0.42
CDK5RAP1-202ENST00000346416 ABCC6O95255 1503 aa17.67■□□□□ 0.42
CDK5RAP1-202ENST00000346416 TATP17735 454 aaPredicted RBP17.66■□□□□ 0.42
CDK5RAP1-202ENST00000346416 PHAXQ9H814 394 aaKnown RBP17.66■□□□□ 0.42
CDK5RAP1-202ENST00000346416 SOS2Q07890 1332 aaPredicted RBP17.66■□□□□ 0.42
CDK5RAP1-202ENST00000346416 CHMP4AQ9BY43 222 aa17.65■□□□□ 0.42
CDK5RAP1-202ENST00000346416 MEGF6O75095 1541 aa17.64■□□□□ 0.41
CDK5RAP1-202ENST00000346416 UPF2Q9HAU5 1272 aaKnown RBP17.64■□□□□ 0.41
CDK5RAP1-202ENST00000346416 ADAMTS7Q9UKP4 1686 aa17.64■□□□□ 0.41
CDK5RAP1-202ENST00000346416 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.63■□□□□ 0.411e-6■□□□□ 8.7
CDK5RAP1-202ENST00000346416 CHPF2Q9P2E5 772 aa17.63■□□□□ 0.41
CDK5RAP1-202ENST00000346416 SPG7Q9UQ90 795 aa17.63■□□□□ 0.41
CDK5RAP1-202ENST00000346416 SIPA1L3O60292 1781 aaPredicted RBP17.63■□□□□ 0.41
CDK5RAP1-202ENST00000346416 GNAI2P04899 355 aa17.62■□□□□ 0.41
CDK5RAP1-202ENST00000346416 PXDNLA1KZ92 1463 aa17.62■□□□□ 0.41
CDK5RAP1-202ENST00000346416 PHKG2P15735 406 aa17.62■□□□□ 0.41
CDK5RAP1-202ENST00000346416 BMP2KLQ5H9B9 411 aa17.62■□□□□ 0.41
CDK5RAP1-202ENST00000346416 GIGYF1O75420 1035 aaPredicted RBP17.61■□□□□ 0.41
CDK5RAP1-202ENST00000346416 GNAI3P08754 354 aa17.61■□□□□ 0.41
CDK5RAP1-202ENST00000346416 PRDM11Q9NQV5 511 aa17.61■□□□□ 0.41
CDK5RAP1-202ENST00000346416 HEG1Q9ULI3 1381 aa17.61■□□□□ 0.41
CDK5RAP1-202ENST00000346416 HMMRO75330 724 aa17.6■□□□□ 0.41
CDK5RAP1-202ENST00000346416 TBC1D32Q96NH3 1257 aa17.6■□□□□ 0.41
CDK5RAP1-202ENST00000346416 KDM6AO15550 1401 aaPredicted RBP17.6■□□□□ 0.41
CDK5RAP1-202ENST00000346416 N4BP2Q86UW6 1770 aaPredicted RBP17.6■□□□□ 0.41
CDK5RAP1-202ENST00000346416 SLC4A3P48751 1232 aa17.6■□□□□ 0.41
CDK5RAP1-202ENST00000346416 IFNL2Q8IZJ0 200 aa17.6■□□□□ 0.41
CDK5RAP1-202ENST00000346416 DAXXQ9UER7 740 aaPredicted RBP17.6■□□□□ 0.41
CDK5RAP1-202ENST00000346416 SCN11AQ9UI33 1791 aa17.59■□□□□ 0.41
CDK5RAP1-202ENST00000346416 PLEKHG2Q9H7P9 1386 aa17.59■□□□□ 0.41
CDK5RAP1-202ENST00000346416 ANXA1P04083 346 aa17.59■□□□□ 0.41
CDK5RAP1-202ENST00000346416 SLC52A2Q9HAB3 445 aa17.59■□□□□ 0.41
CDK5RAP1-202ENST00000346416 DBF4Q9UBU7 674 aaPredicted RBP17.59■□□□□ 0.41
CDK5RAP1-202ENST00000346416 USP44Q9H0E7 712 aa17.58■□□□□ 0.4
CDK5RAP1-202ENST00000346416 PRAMEF22A3QJZ6 481 aa17.57■□□□□ 0.4
CDK5RAP1-202ENST00000346416 CYP27B1O15528 508 aa17.57■□□□□ 0.4
CDK5RAP1-202ENST00000346416 PLEKHM2Q8IWE5 1019 aa17.57■□□□□ 0.4
CDK5RAP1-202ENST00000346416 NFATC2IPQ8NCF5 419 aa17.57■□□□□ 0.4
CDK5RAP1-202ENST00000346416 BCL11AQ9H165 835 aa17.57■□□□□ 0.4
CDK5RAP1-202ENST00000346416 PI4KAP2A4QPH2 592 aa17.57■□□□□ 0.4
CDK5RAP1-202ENST00000346416 APBB1O00213 710 aa17.57■□□□□ 0.4
CDK5RAP1-202ENST00000346416 MFAP1P55081 439 aaKnown RBP17.57■□□□□ 0.4
CDK5RAP1-202ENST00000346416 ZNF790Q6PG37 636 aa17.57■□□□□ 0.4
CDK5RAP1-202ENST00000346416 PI4KAP1Q8N8J0 262 aa17.57■□□□□ 0.4
CDK5RAP1-202ENST00000346416 WDR17Q8IZU2 1322 aa17.56■□□□□ 0.4
CDK5RAP1-202ENST00000346416 SLC39A6Q13433 755 aa17.56■□□□□ 0.4
CDK5RAP1-202ENST00000346416 C16orf71Q8IYS4 520 aaPredicted RBP17.56■□□□□ 0.4
CDK5RAP1-202ENST00000346416 DNAAF4Q8WXU2 420 aa17.56■□□□□ 0.4
CDK5RAP1-202ENST00000346416 DCAF5Q96JK2 942 aa17.56■□□□□ 0.4
CDK5RAP1-202ENST00000346416 SRCIN1Q9C0H9 1055 aa17.56■□□□□ 0.4
CDK5RAP1-202ENST00000346416 PKD1L3Q7Z443 1732 aa17.56■□□□□ 0.4
CDK5RAP1-202ENST00000346416 LRRFIP2Q9Y608 721 aaKnown RBP17.56■□□□□ 0.4
CDK5RAP1-202ENST00000346416 SMARCA5O60264 1052 aaPredicted RBP17.55■□□□□ 0.4
CDK5RAP1-202ENST00000346416 UBTFL1P0CB47 393 aaPredicted RBP17.55■□□□□ 0.4
CDK5RAP1-202ENST00000346416 PROSER3Q2NL68 480 aa17.55■□□□□ 0.4
CDK5RAP1-202ENST00000346416 TOM1L2Q6ZVM7 507 aa17.55■□□□□ 0.4
CDK5RAP1-202ENST00000346416 ATP8B2P98198 1209 aa17.54■□□□□ 0.4
CDK5RAP1-202ENST00000346416 ADCY9O60503 1353 aa17.54■□□□□ 0.4
CDK5RAP1-202ENST00000346416 COL5A2P05997 1499 aaPredicted RBP17.54■□□□□ 0.4
CDK5RAP1-202ENST00000346416 PNMA6EA0A0J9YXQ4 647 aa17.54■□□□□ 0.4
CDK5RAP1-202ENST00000346416 BEND3Q5T5X7 828 aa17.54■□□□□ 0.4
CDK5RAP1-202ENST00000346416 C22orf23Q9BZE7 217 aa17.54■□□□□ 0.4
CDK5RAP1-202ENST00000346416 NHSL1Q5SYE7 1610 aa17.54■□□□□ 0.4
CDK5RAP1-202ENST00000346416 ABCA3Q99758 1704 aa17.54■□□□□ 0.4
CDK5RAP1-202ENST00000346416 HSP90AB1P08238 724 aaKnown RBP17.53■□□□□ 0.4
CDK5RAP1-202ENST00000346416 OTUD7AQ8TE49 926 aaPredicted RBP17.53■□□□□ 0.4
CDK5RAP1-202ENST00000346416 GSPT1P15170 499 aaKnown RBP17.53■□□□□ 0.4
CDK5RAP1-202ENST00000346416 EXOC6BQ9Y2D4 811 aa17.53■□□□□ 0.4
CDK5RAP1-202ENST00000346416 NBR1Q14596 966 aa17.52■□□□□ 0.4
CDK5RAP1-202ENST00000346416 HYPKQ9NX55 129 aa17.52■□□□□ 0.4
CDK5RAP1-202ENST00000346416 MRC1P22897 1456 aa17.51■□□□□ 0.39
CDK5RAP1-202ENST00000346416 TTC22Q5TAA0 569 aa17.51■□□□□ 0.39
CDK5RAP1-202ENST00000346416 DDX21Q9NR30 783 aaKnown RBP eCLIP17.51■□□□□ 0.39
CDK5RAP1-202ENST00000346416 NBPF7P0C2Y1 421 aaPredicted RBP17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms