RNA–Protein interactions for RNA: ENST00000346213.8

RAB5C-201, Transcript of RAB5C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5C, Length 1,671 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-201ENST00000346213 ERVV-2B6SEH9 535 aa21.64■■□□□ 1.05
RAB5C-201ENST00000346213 PELP1Q8IZL8 1130 aaKnown RBP21.64■■□□□ 1.05
RAB5C-201ENST00000346213 COL23A1Q86Y22 540 aaPredicted RBP21.63■■□□□ 1.05
RAB5C-201ENST00000346213 COL24A1Q17RW2 1714 aa21.63■■□□□ 1.05
RAB5C-201ENST00000346213 AKAP4Q5JQC9 854 aa21.63■■□□□ 1.05
RAB5C-201ENST00000346213 NFATC2IPQ8NCF5 419 aa21.63■■□□□ 1.05
RAB5C-201ENST00000346213 C1orf141Q5JVX7 400 aa21.62■■□□□ 1.05
RAB5C-201ENST00000346213 MIER1Q8N108 512 aa21.62■■□□□ 1.05
RAB5C-201ENST00000346213 TFCP2L1Q9NZI6 479 aa21.62■■□□□ 1.05
RAB5C-201ENST00000346213 RNMTO43148 476 aaKnown RBP21.61■■□□□ 1.05
RAB5C-201ENST00000346213 SMARCC1Q92922 1105 aaPredicted RBP21.61■■□□□ 1.05
RAB5C-201ENST00000346213 PRKAR2BP31323 418 aa21.6■■□□□ 1.05
RAB5C-201ENST00000346213 MTFR1LQ9H019 292 aa21.6■■□□□ 1.05
RAB5C-201ENST00000346213 UBR3Q6ZT12 1888 aa21.6■■□□□ 1.05
RAB5C-201ENST00000346213 HSP90AB1P08238 724 aaKnown RBP21.6■■□□□ 1.05
RAB5C-201ENST00000346213 CABP4P57796 275 aa21.6■■□□□ 1.05
RAB5C-201ENST00000346213 TJP1Q07157 1748 aa21.59■■□□□ 1.05
RAB5C-201ENST00000346213 VIRMAQ69YN4 1812 aaKnown RBP21.59■■□□□ 1.05
RAB5C-201ENST00000346213 COL5A3P25940 1745 aaPredicted RBP21.59■■□□□ 1.05
RAB5C-201ENST00000346213 KCPQ6ZWJ8 1503 aa21.58■■□□□ 1.05
RAB5C-201ENST00000346213 IL17REQ8NFR9 667 aa21.57■■□□□ 1.04
RAB5C-201ENST00000346213 SLC52A2Q9HAB3 445 aa21.57■■□□□ 1.04
RAB5C-201ENST00000346213 ZNF831Q5JPB2 1677 aa21.57■■□□□ 1.04
RAB5C-201ENST00000346213 ATP6V1AP38606 617 aa21.56■■□□□ 1.04
RAB5C-201ENST00000346213 SLC39A6Q13433 755 aa21.56■■□□□ 1.04
RAB5C-201ENST00000346213 MSL1Q68DK7 614 aa21.56■■□□□ 1.04
RAB5C-201ENST00000346213 CFAP53Q96M91 514 aa21.56■■□□□ 1.04
RAB5C-201ENST00000346213 MAP3K5Q99683 1374 aa21.56■■□□□ 1.04
RAB5C-201ENST00000346213 UTRNP46939 3433 aa21.55■■□□□ 1.04
RAB5C-201ENST00000346213 PTCD1O75127 700 aaKnown RBP21.55■■□□□ 1.04
RAB5C-201ENST00000346213 U2AF1L5P0DN76 240 aaPredicted RBP21.55■■□□□ 1.04
RAB5C-201ENST00000346213 U2AF1Q01081 240 aaKnown RBP eCLIP21.55■■□□□ 1.04
RAB5C-201ENST00000346213 RBM42Q9BTD8 480 aaKnown RBP21.55■■□□□ 1.04
RAB5C-201ENST00000346213 CICQ96RK0 1608 aaPredicted RBP21.54■■□□□ 1.04
RAB5C-201ENST00000346213 PHF14O94880 888 aa21.54■■□□□ 1.04
RAB5C-201ENST00000346213 SIPA1L3O60292 1781 aaPredicted RBP21.54■■□□□ 1.04
RAB5C-201ENST00000346213 GOLGB1Q14789 3259 aaKnown RBP21.53■■□□□ 1.04
RAB5C-201ENST00000346213 FHDC1Q9C0D6 1143 aaPredicted RBP21.53■■□□□ 1.04
RAB5C-201ENST00000346213 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.52■■□□□ 1.04
RAB5C-201ENST00000346213 MYH14Q7Z406 1995 aaKnown RBP21.52■■□□□ 1.04
RAB5C-201ENST00000346213 CEMIPQ8WUJ3 1361 aa21.51■■□□□ 1.03
RAB5C-201ENST00000346213 AK7Q96M32 723 aa21.51■■□□□ 1.03
RAB5C-201ENST00000346213 PPP1R1BQ9UD71 204 aaPredicted RBP21.51■■□□□ 1.03
RAB5C-201ENST00000346213 UBR2Q8IWV8 1755 aa21.51■■□□□ 1.03
RAB5C-201ENST00000346213 GNPATO15228 680 aa21.5■■□□□ 1.03
RAB5C-201ENST00000346213 PLEKHF1Q96S99 279 aa21.5■■□□□ 1.03
RAB5C-201ENST00000346213 MSH5O43196 834 aa21.49■■□□□ 1.03
RAB5C-201ENST00000346213 DCTN1Q14203 1278 aa21.49■■□□□ 1.03
RAB5C-201ENST00000346213 SLC16A10Q8TF71 515 aa21.49■■□□□ 1.03
RAB5C-201ENST00000346213 GNAT3A8MTJ3 354 aa21.48■■□□□ 1.03
RAB5C-201ENST00000346213 KCNQ3O43525 872 aa21.48■■□□□ 1.03
RAB5C-201ENST00000346213 FCHSD2O94868 740 aa21.48■■□□□ 1.03
RAB5C-201ENST00000346213 DNAJC10Q8IXB1 793 aa21.48■■□□□ 1.03
RAB5C-201ENST00000346213 GAS2L2Q8NHY3 880 aa21.48■■□□□ 1.03
RAB5C-201ENST00000346213 ARXQ96QS3 562 aa21.48■■□□□ 1.03
RAB5C-201ENST00000346213 MCM10Q7L590 875 aa21.47■■□□□ 1.03
RAB5C-201ENST00000346213 SYT17Q9BSW7 474 aa21.47■■□□□ 1.03
RAB5C-201ENST00000346213 NUDCQ9Y266 331 aa21.47■■□□□ 1.03
RAB5C-201ENST00000346213 RALBP1Q15311 655 aa21.47■■□□□ 1.03
RAB5C-201ENST00000346213 C4AP0C0L4 1744 aa21.46■■□□□ 1.03
RAB5C-201ENST00000346213 CNTNAP4Q9C0A0 1308 aa21.46■■□□□ 1.03
RAB5C-201ENST00000346213 SSFA2P28290 1259 aa21.45■■□□□ 1.02
RAB5C-201ENST00000346213 CRKLP46109 303 aaKnown RBP21.45■■□□□ 1.02
RAB5C-201ENST00000346213 INTS5Q6P9B9 1019 aaKnown RBP21.45■■□□□ 1.02
RAB5C-201ENST00000346213 MYBBP1AQ9BQG0 1328 aaKnown RBP21.45■■□□□ 1.02
RAB5C-201ENST00000346213 NLGN2Q8NFZ4 835 aa21.44■■□□□ 1.02
RAB5C-201ENST00000346213 PRKRIP1Q9H875 184 aaPredicted RBP21.44■■□□□ 1.02
RAB5C-201ENST00000346213 ZNF496Q96IT1 587 aaPredicted RBP21.43■■□□□ 1.02
RAB5C-201ENST00000346213 RC3H1Q5TC82 1133 aaKnown RBP21.42■■□□□ 1.02
RAB5C-201ENST00000346213 ARHGEF1Q92888 912 aaKnown RBP21.42■■□□□ 1.02
RAB5C-201ENST00000346213 CYP19A1P11511 503 aaPredicted RBP21.41■■□□□ 1.02
RAB5C-201ENST00000346213 THUMPD2Q9BTF0 503 aaKnown RBP21.41■■□□□ 1.02
RAB5C-201ENST00000346213 DLG5Q8TDM6 1919 aa21.41■■□□□ 1.02
RAB5C-201ENST00000346213 RPS6KA4O75676 772 aa21.4■■□□□ 1.02
RAB5C-201ENST00000346213 PRAMEF22A3QJZ6 481 aa21.4■■□□□ 1.02
RAB5C-201ENST00000346213 CCDC184Q52MB2 194 aa21.4■■□□□ 1.02
RAB5C-201ENST00000346213 ZNF790Q6PG37 636 aa21.4■■□□□ 1.02
RAB5C-201ENST00000346213 SRP68Q9UHB9 627 aaKnown RBP21.4■■□□□ 1.02
RAB5C-201ENST00000346213 FLAD1Q8NFF5 587 aa21.39■■□□□ 1.01
RAB5C-201ENST00000346213 ZBTB1Q9Y2K1 713 aa21.39■■□□□ 1.01
RAB5C-201ENST00000346213 TEFQ10587 303 aa21.38■■□□□ 1.01
RAB5C-201ENST00000346213 RTCBQ9Y3I0 505 aaKnown RBP21.38■■□□□ 1.01
RAB5C-201ENST00000346213 GYS1P13807 737 aa21.37■■□□□ 1.01
RAB5C-201ENST00000346213 POLD1P28340 1107 aa21.37■■□□□ 1.01
RAB5C-201ENST00000346213 KLHL34Q8N239 644 aa21.37■■□□□ 1.01
RAB5C-201ENST00000346213 SOS1Q07889 1333 aaPredicted RBP21.37■■□□□ 1.01
RAB5C-201ENST00000346213 HEG1Q9ULI3 1381 aa21.37■■□□□ 1.01
RAB5C-201ENST00000346213 CCDC87Q9NVE4 849 aa21.36■■□□□ 1.01
RAB5C-201ENST00000346213 MIS18AQ9NYP9 233 aa21.36■■□□□ 1.01
RAB5C-201ENST00000346213 NFE2L2Q16236 605 aa21.35■■□□□ 1.01
RAB5C-201ENST00000346213 CCDC146Q8IYE0 955 aa21.35■■□□□ 1.01
RAB5C-201ENST00000346213 TRAPPC3LQ5T215 181 aa21.34■■□□□ 1.01
RAB5C-201ENST00000346213 BTBD11A6QL63 1104 aa21.34■■□□□ 1.01
RAB5C-201ENST00000346213 USP42Q9H9J4 1324 aaKnown RBP21.33■■□□□ 1.01
RAB5C-201ENST00000346213 KIAA1551Q9HCM1 1747 aa21.33■■□□□ 1
RAB5C-201ENST00000346213 VSIG10Q8N0Z9 540 aa21.33■■□□□ 1
RAB5C-201ENST00000346213 MMP10P09238 476 aa21.32■■□□□ 1
RAB5C-201ENST00000346213 FKBP8Q14318 412 aa21.32■■□□□ 1
RAB5C-201ENST00000346213 BCL2L12Q9HB09 334 aa21.32■■□□□ 1
RAB5C-201ENST00000346213 RRP7AQ9Y3A4 280 aaKnown RBP21.32■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms