RNA–Protein interactions for RNA: ENST00000345165.8

CCDC78-202, Transcript of coiled-coil domain containing 78, humanhuman

APPRIS ALT2 TSL 5

Gene CCDC78, Length 1,055 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-202ENST00000345165 RSPH6AQ9H0K4 717 aa25.34■■□□□ 1.65
CCDC78-202ENST00000345165 COL5A3P25940 1745 aaPredicted RBP25.34■■□□□ 1.65
CCDC78-202ENST00000345165 UBR3Q6ZT12 1888 aa25.34■■□□□ 1.65
CCDC78-202ENST00000345165 PNPLA7Q6ZV29 1317 aa25.34■■□□□ 1.65
CCDC78-202ENST00000345165 DDX10Q13206 875 aaKnown RBP25.33■■□□□ 1.65
CCDC78-202ENST00000345165 FLAD1Q8NFF5 587 aa25.33■■□□□ 1.65
CCDC78-202ENST00000345165 PDGFDQ9GZP0 370 aaPredicted RBP25.33■■□□□ 1.65
CCDC78-202ENST00000345165 TFCP2L1Q9NZI6 479 aa25.33■■□□□ 1.65
CCDC78-202ENST00000345165 KCNQ4P56696 695 aa25.32■■□□□ 1.64
CCDC78-202ENST00000345165 MAP3K5Q99683 1374 aa25.31■■□□□ 1.64
CCDC78-202ENST00000345165 SLC52A2Q9HAB3 445 aa25.31■■□□□ 1.64
CCDC78-202ENST00000345165 RNMTO43148 476 aaKnown RBP25.3■■□□□ 1.64
CCDC78-202ENST00000345165 SGIP1Q9BQI5 828 aa25.3■■□□□ 1.64
CCDC78-202ENST00000345165 SIPA1L3O60292 1781 aaPredicted RBP25.29■■□□□ 1.64
CCDC78-202ENST00000345165 PTGER2P43116 358 aa25.29■■□□□ 1.64
CCDC78-202ENST00000345165 NFATC2IPQ8NCF5 419 aa25.29■■□□□ 1.64
CCDC78-202ENST00000345165 U2AF1L5P0DN76 240 aaPredicted RBP25.28■■□□□ 1.64
CCDC78-202ENST00000345165 PRKAR2BP31323 418 aa25.28■■□□□ 1.64
CCDC78-202ENST00000345165 U2AF1Q01081 240 aaKnown RBP eCLIP25.28■■□□□ 1.64
CCDC78-202ENST00000345165 UBR2Q8IWV8 1755 aa25.28■■□□□ 1.64
CCDC78-202ENST00000345165 GNAT3A8MTJ3 354 aa25.27■■□□□ 1.64
CCDC78-202ENST00000345165 ZBTB7AO95365 584 aa25.27■■□□□ 1.64
CCDC78-202ENST00000345165 CEMIPQ8WUJ3 1361 aa25.27■■□□□ 1.64
CCDC78-202ENST00000345165 ATP6V1AP38606 617 aa25.26■■□□□ 1.63
CCDC78-202ENST00000345165 MYBBP1AQ9BQG0 1328 aaKnown RBP25.26■■□□□ 1.63
CCDC78-202ENST00000345165 SSFA2P28290 1259 aa25.25■■□□□ 1.63
CCDC78-202ENST00000345165 AK7Q96M32 723 aa25.25■■□□□ 1.63
CCDC78-202ENST00000345165 LGR6Q9HBX8 967 aa25.25■■□□□ 1.63
CCDC78-202ENST00000345165 TJP1Q07157 1748 aa25.25■■□□□ 1.63
CCDC78-202ENST00000345165 CNTNAP4Q9C0A0 1308 aa25.24■■□□□ 1.63
CCDC78-202ENST00000345165 ITPK1Q13572 414 aa25.24■■□□□ 1.63
CCDC78-202ENST00000345165 RC3H1Q5TC82 1133 aaKnown RBP25.24■■□□□ 1.63
CCDC78-202ENST00000345165 LINC00116Q8NCU8 138 aa25.24■■□□□ 1.63
CCDC78-202ENST00000345165 PPP1R1BQ9UD71 204 aaPredicted RBP25.24■■□□□ 1.63
CCDC78-202ENST00000345165 PHACTR3Q96KR7 559 aa25.23■■□□□ 1.63
CCDC78-202ENST00000345165 SLC4A9Q96Q91 983 aa25.22■■□□□ 1.63
CCDC78-202ENST00000345165 PNNQ9H307 717 aaKnown RBP25.22■■□□□ 1.63
CCDC78-202ENST00000345165 KCPQ6ZWJ8 1503 aa25.22■■□□□ 1.63
CCDC78-202ENST00000345165 HTATSF1O43719 755 aaKnown RBP25.21■■□□□ 1.63
CCDC78-202ENST00000345165 COL23A1Q86Y22 540 aaPredicted RBP25.21■■□□□ 1.63
CCDC78-202ENST00000345165 ATF5Q9Y2D1 282 aaPredicted RBP25.2■■□□□ 1.62
CCDC78-202ENST00000345165 ADRA2BP18089 450 aa25.19■■□□□ 1.62
CCDC78-202ENST00000345165 VSIG10Q8N0Z9 540 aa25.19■■□□□ 1.62
CCDC78-202ENST00000345165 IL17REQ8NFR9 667 aa25.19■■□□□ 1.62
CCDC78-202ENST00000345165 RBM42Q9BTD8 480 aaKnown RBP25.19■■□□□ 1.62
CCDC78-202ENST00000345165 NEFMP07197 916 aa25.18■■□□□ 1.62
CCDC78-202ENST00000345165 PRKRIP1Q9H875 184 aaPredicted RBP25.18■■□□□ 1.62
CCDC78-202ENST00000345165 MYH14Q7Z406 1995 aaKnown RBP25.18■■□□□ 1.62
CCDC78-202ENST00000345165 POLD1P28340 1107 aa25.17■■□□□ 1.62
CCDC78-202ENST00000345165 TEFQ10587 303 aa25.17■■□□□ 1.62
CCDC78-202ENST00000345165 DLG5Q8TDM6 1919 aa25.16■■□□□ 1.62
CCDC78-202ENST00000345165 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.16■■□□□ 1.62
CCDC78-202ENST00000345165 ARXQ96QS3 562 aa25.16■■□□□ 1.62
CCDC78-202ENST00000345165 PLEKHF1Q96S99 279 aa25.16■■□□□ 1.62
CCDC78-202ENST00000345165 GNPATO15228 680 aa25.15■■□□□ 1.62
CCDC78-202ENST00000345165 PTCD1O75127 700 aaKnown RBP25.15■■□□□ 1.62
CCDC78-202ENST00000345165 RTCBQ9Y3I0 505 aaKnown RBP25.14■■□□□ 1.62
CCDC78-202ENST00000345165 C4AP0C0L4 1744 aa25.13■■□□□ 1.61
CCDC78-202ENST00000345165 AMIGO3Q86WK7 504 aa25.13■■□□□ 1.61
CCDC78-202ENST00000345165 RTF1Q92541 710 aaKnown RBP25.13■■□□□ 1.61
CCDC78-202ENST00000345165 ZNF316A6NFI3 1004 aaPredicted RBP25.12■■□□□ 1.61
CCDC78-202ENST00000345165 RPS6KA4O75676 772 aa25.12■■□□□ 1.61
CCDC78-202ENST00000345165 MSH5O43196 834 aa25.11■■□□□ 1.61
CCDC78-202ENST00000345165 ZNF790Q6PG37 636 aa25.11■■□□□ 1.61
CCDC78-202ENST00000345165 TTC5Q8N0Z6 440 aa25.11■■□□□ 1.61
CCDC78-202ENST00000345165 CRKLP46109 303 aaKnown RBP25.1■■□□□ 1.61
CCDC78-202ENST00000345165 SLC39A6Q13433 755 aa25.09■■□□□ 1.61
CCDC78-202ENST00000345165 FHDC1Q9C0D6 1143 aaPredicted RBP25.09■■□□□ 1.61
CCDC78-202ENST00000345165 MAPK8IP3Q9UPT6 1336 aa25.09■■□□□ 1.61
CCDC78-202ENST00000345165 NFE2L2Q16236 605 aa25.08■■□□□ 1.61
CCDC78-202ENST00000345165 TRAPPC3LQ5T215 181 aa25.08■■□□□ 1.61
CCDC78-202ENST00000345165 SYT17Q9BSW7 474 aa25.08■■□□□ 1.61
CCDC78-202ENST00000345165 TEX13AQ9BXU3 409 aaPredicted RBP25.08■■□□□ 1.61
CCDC78-202ENST00000345165 HEG1Q9ULI3 1381 aa25.07■■□□□ 1.6
CCDC78-202ENST00000345165 PHF14O94880 888 aa25.07■■□□□ 1.6
CCDC78-202ENST00000345165 CYP19A1P11511 503 aaPredicted RBP25.06■■□□□ 1.6
CCDC78-202ENST00000345165 CCDC87Q9NVE4 849 aa25.06■■□□□ 1.6
CCDC78-202ENST00000345165 INTS5Q6P9B9 1019 aaKnown RBP25.05■■□□□ 1.6
CCDC78-202ENST00000345165 DNAJC10Q8IXB1 793 aa25.05■■□□□ 1.6
CCDC78-202ENST00000345165 FMNL2Q96PY5 1086 aa25.05■■□□□ 1.6
CCDC78-202ENST00000345165 BTBD11A6QL63 1104 aa25.04■■□□□ 1.6
CCDC78-202ENST00000345165 ZNF496Q96IT1 587 aaPredicted RBP25.04■■□□□ 1.6
CCDC78-202ENST00000345165 KDM3BQ7LBC6 1761 aa25.03■■□□□ 1.6
CCDC78-202ENST00000345165 STARD3NLO95772 234 aa25.03■■□□□ 1.6
CCDC78-202ENST00000345165 MCM10Q7L590 875 aa25.03■■□□□ 1.6
CCDC78-202ENST00000345165 NLGN1Q8N2Q7 840 aa25.03■■□□□ 1.6
CCDC78-202ENST00000345165 ARHGEF1Q92888 912 aaKnown RBP25.03■■□□□ 1.6
CCDC78-202ENST00000345165 SOS1Q07889 1333 aaPredicted RBP25.02■■□□□ 1.6
CCDC78-202ENST00000345165 RFC4P35249 363 aa25.01■■□□□ 1.59
CCDC78-202ENST00000345165 WDR43Q15061 677 aaKnown RBP eCLIP25.01■■□□□ 1.59
CCDC78-202ENST00000345165 TAF7Q15545 349 aaPredicted RBP25.01■■□□□ 1.59
CCDC78-202ENST00000345165 PNISRQ8TF01 805 aaKnown RBP25.01■■□□□ 1.59
CCDC78-202ENST00000345165 DCAF8L1A6NGE4 600 aa25■■□□□ 1.59
CCDC78-202ENST00000345165 LMOD3Q0VAK6 560 aa25■■□□□ 1.59
CCDC78-202ENST00000345165 MSL1Q68DK7 614 aa25■■□□□ 1.59
CCDC78-202ENST00000345165 CD2APQ9Y5K6 639 aa25■■□□□ 1.59
CCDC78-202ENST00000345165 USP42Q9H9J4 1324 aaKnown RBP25■■□□□ 1.59
CCDC78-202ENST00000345165 KIF13BQ9NQT8 1826 aa25■■□□□ 1.59
CCDC78-202ENST00000345165 LAMB4A4D0S4 1761 aa24.98■■□□□ 1.59
CCDC78-202ENST00000345165 GYS1P13807 737 aa24.98■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms