RNA–Protein interactions for RNA: ENST00000344935.8

CPSF4L-201, Transcript of cleavage and polyadenylation specific factor 4 like, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CPSF4L, Length 647 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4L-201ENST00000344935 ADRA2BP18089 450 aa11.38□□□□□ -0.59
CPSF4L-201ENST00000344935 CNTNAP4Q9C0A0 1308 aa11.37□□□□□ -0.59
CPSF4L-201ENST00000344935 PHKG2P15735 406 aa11.37□□□□□ -0.59
CPSF4L-201ENST00000344935 IFNL2Q8IZJ0 200 aa11.37□□□□□ -0.59
CPSF4L-201ENST00000344935 LINC00116Q8NCU8 138 aa11.37□□□□□ -0.59
CPSF4L-201ENST00000344935 EYA1Q99502 592 aa11.37□□□□□ -0.59
CPSF4L-201ENST00000344935 GPBP1L1Q9HC44 474 aaPredicted RBP11.37□□□□□ -0.59
CPSF4L-201ENST00000344935 TMOD3Q9NYL9 352 aa11.37□□□□□ -0.59
CPSF4L-201ENST00000344935 VIRMAQ69YN4 1812 aaKnown RBP11.37□□□□□ -0.59
CPSF4L-201ENST00000344935 DLEC1Q9Y238 1755 aa11.36□□□□□ -0.59
CPSF4L-201ENST00000344935 IFFO2Q5TF58 517 aa11.36□□□□□ -0.59
CPSF4L-201ENST00000344935 POLKQ9UBT6 870 aa11.36□□□□□ -0.59
CPSF4L-201ENST00000344935 MRC1P22897 1456 aa11.36□□□□□ -0.59
CPSF4L-201ENST00000344935 TNRC6CQ9HCJ0 1690 aaKnown RBP11.36□□□□□ -0.59
CPSF4L-201ENST00000344935 KDM6AO15550 1401 aaPredicted RBP11.35□□□□□ -0.59
CPSF4L-201ENST00000344935 ERVV-2B6SEH9 535 aa11.35□□□□□ -0.59
CPSF4L-201ENST00000344935 HSPA6P17066 643 aa11.35□□□□□ -0.59
CPSF4L-201ENST00000344935 ITPK1Q13572 414 aa11.35□□□□□ -0.59
CPSF4L-201ENST00000344935 RC3H1Q5TC82 1133 aaKnown RBP11.35□□□□□ -0.59
CPSF4L-201ENST00000344935 NRXN2Q9P2S2 1712 aa11.35□□□□□ -0.59
CPSF4L-201ENST00000344935 GNPATO15228 680 aa11.34□□□□□ -0.59
CPSF4L-201ENST00000344935 HSP90AB1P08238 724 aaKnown RBP11.34□□□□□ -0.59
CPSF4L-201ENST00000344935 TGFB2P61812 414 aa11.34□□□□□ -0.59
CPSF4L-201ENST00000344935 DCAF5Q96JK2 942 aa11.34□□□□□ -0.59
CPSF4L-201ENST00000344935 ASAP1Q9ULH1 1129 aa11.34□□□□□ -0.59
CPSF4L-201ENST00000344935 WDR90Q96KV7 1748 aa11.33□□□□□ -0.6
CPSF4L-201ENST00000344935 EIF4A2Q14240 407 aaKnown RBP11.33□□□□□ -0.6
CPSF4L-201ENST00000344935 NLGN1Q8N2Q7 840 aa11.33□□□□□ -0.6
CPSF4L-201ENST00000344935 ATG3Q9NT62 314 aa11.33□□□□□ -0.6
CPSF4L-201ENST00000344935 UBR2Q8IWV8 1755 aa11.33□□□□□ -0.6
CPSF4L-201ENST00000344935 SBF1O95248 1867 aa11.32□□□□□ -0.6
CPSF4L-201ENST00000344935 KIF3CO14782 793 aa11.32□□□□□ -0.6
CPSF4L-201ENST00000344935 PHF14O94880 888 aa11.32□□□□□ -0.6
CPSF4L-201ENST00000344935 MMP10P09238 476 aa11.32□□□□□ -0.6
CPSF4L-201ENST00000344935 ATP6V1AP38606 617 aa11.32□□□□□ -0.6
CPSF4L-201ENST00000344935 AMOTQ4VCS5 1084 aa11.31□□□□□ -0.6
CPSF4L-201ENST00000344935 RTCBQ9Y3I0 505 aaKnown RBP11.31□□□□□ -0.6
CPSF4L-201ENST00000344935 RPS6KA4O75676 772 aa11.3□□□□□ -0.6
CPSF4L-201ENST00000344935 SLC4A9Q96Q91 983 aa11.3□□□□□ -0.6
CPSF4L-201ENST00000344935 PPM1GO15355 546 aaPredicted RBP11.29□□□□□ -0.6
CPSF4L-201ENST00000344935 GYS1P13807 737 aa11.29□□□□□ -0.6
CPSF4L-201ENST00000344935 TRAPPC3LQ5T215 181 aa11.29□□□□□ -0.6
CPSF4L-201ENST00000344935 AFDNP55196 1824 aaKnown RBP11.29□□□□□ -0.6
CPSF4L-201ENST00000344935 APLP1P51693 650 aa11.28□□□□□ -0.6
CPSF4L-201ENST00000344935 TRIM26Q12899 539 aaPredicted RBP11.28□□□□□ -0.6
CPSF4L-201ENST00000344935 CCDC87Q9NVE4 849 aa11.28□□□□□ -0.6
CPSF4L-201ENST00000344935 ZC3H4Q9UPT8 1303 aaKnown RBP11.28□□□□□ -0.6
CPSF4L-201ENST00000344935 SCN7AQ01118 1682 aa11.27□□□□□ -0.6
CPSF4L-201ENST00000344935 KCPQ6ZWJ8 1503 aa11.27□□□□□ -0.61
CPSF4L-201ENST00000344935 TOMM70O94826 608 aa11.27□□□□□ -0.61
CPSF4L-201ENST00000344935 PLEKHO1Q53GL0 409 aaPredicted RBP11.27□□□□□ -0.61
CPSF4L-201ENST00000344935 ARHGEF1Q92888 912 aaKnown RBP11.27□□□□□ -0.61
CPSF4L-201ENST00000344935 USP42Q9H9J4 1324 aaKnown RBP11.27□□□□□ -0.61
CPSF4L-201ENST00000344935 TIAM2Q8IVF5 1701 aa11.26□□□□□ -0.61
CPSF4L-201ENST00000344935 SIPA1L3O60292 1781 aaPredicted RBP11.26□□□□□ -0.61
CPSF4L-201ENST00000344935 SMIM5Q71RC9 77 aa11.26□□□□□ -0.61
CPSF4L-201ENST00000344935 RFC4P35249 363 aa11.25□□□□□ -0.61
CPSF4L-201ENST00000344935 ZNF530Q6P9A1 599 aaPredicted RBP11.25□□□□□ -0.61
CPSF4L-201ENST00000344935 PARP3Q9Y6F1 533 aa11.25□□□□□ -0.61
CPSF4L-201ENST00000344935 ARFGEF2Q9Y6D5 1785 aa11.24□□□□□ -0.61
CPSF4L-201ENST00000344935 KCNA3P22001 575 aa11.24□□□□□ -0.61
CPSF4L-201ENST00000344935 CRKLP46109 303 aaKnown RBP11.24□□□□□ -0.61
CPSF4L-201ENST00000344935 CABP4P57796 275 aa11.24□□□□□ -0.61
CPSF4L-201ENST00000344935 RBM46Q8TBY0 533 aaKnown RBP11.24□□□□□ -0.61
CPSF4L-201ENST00000344935 ZNF526Q8TF50 670 aaPredicted RBP11.24□□□□□ -0.61
CPSF4L-201ENST00000344935 DICER1Q9UPY3 1922 aaKnown RBP11.24□□□□□ -0.61
CPSF4L-201ENST00000344935 PCNTO95613 3336 aa11.24□□□□□ -0.61
CPSF4L-201ENST00000344935 DPEP1P16444 411 aa11.23□□□□□ -0.61
CPSF4L-201ENST00000344935 C1orf141Q5JVX7 400 aa11.23□□□□□ -0.61
CPSF4L-201ENST00000344935 RBM42Q9BTD8 480 aaKnown RBP11.23□□□□□ -0.61
CPSF4L-201ENST00000344935 BCS1LQ9Y276 419 aa11.23□□□□□ -0.61
CPSF4L-201ENST00000344935 A0A0G2JLW4 131 aa11.22□□□□□ -0.61
CPSF4L-201ENST00000344935 MTHFSP49914 203 aa11.22□□□□□ -0.61
CPSF4L-201ENST00000344935 EIF4G2P78344 907 aaKnown RBP eCLIP11.22□□□□□ -0.61
CPSF4L-201ENST00000344935 SOS1Q07889 1333 aaPredicted RBP11.22□□□□□ -0.61
CPSF4L-201ENST00000344935 FSTL1Q12841 308 aa11.22□□□□□ -0.61
CPSF4L-201ENST00000344935 BCORQ6W2J9 1755 aa11.22□□□□□ -0.61
CPSF4L-201ENST00000344935 DNAJC5GQ8N7S2 189 aa11.22□□□□□ -0.61
CPSF4L-201ENST00000344935 ANKRD31Q8N7Z5 1873 aa11.22□□□□□ -0.61
CPSF4L-201ENST00000344935 PIM2Q9P1W9 311 aa11.22□□□□□ -0.61
CPSF4L-201ENST00000344935 KDM2BQ8NHM5 1336 aa11.21□□□□□ -0.61
CPSF4L-201ENST00000344935 POLRMTO00411 1230 aaKnown RBP11.21□□□□□ -0.61
CPSF4L-201ENST00000344935 FCHSD2O94868 740 aa11.21□□□□□ -0.61
CPSF4L-201ENST00000344935 TM4SF1P30408 202 aa11.21□□□□□ -0.61
CPSF4L-201ENST00000344935 IL13P35225 146 aa11.21□□□□□ -0.61
CPSF4L-201ENST00000344935 DDR1Q08345 913 aa11.21□□□□□ -0.61
CPSF4L-201ENST00000344935 AKAP4Q5JQC9 854 aa11.21□□□□□ -0.61
CPSF4L-201ENST00000344935 AEBP1Q8IUX7 1158 aa11.21□□□□□ -0.61
CPSF4L-201ENST00000344935 VSIG10Q8N0Z9 540 aa11.21□□□□□ -0.61
CPSF4L-201ENST00000344935 PANK3Q9H999 370 aa11.21□□□□□ -0.61
CPSF4L-201ENST00000344935 FER1L6Q2WGJ9 1857 aa11.21□□□□□ -0.62
CPSF4L-201ENST00000344935 COL11A2P13942 1736 aaPredicted RBP11.21□□□□□ -0.62
CPSF4L-201ENST00000344935 COL15A1P39059 1388 aa11.2□□□□□ -0.62
CPSF4L-201ENST00000344935 TNNT2P45379 298 aaPredicted RBP11.2□□□□□ -0.62
CPSF4L-201ENST00000344935 FKBP8Q14318 412 aa11.2□□□□□ -0.62
CPSF4L-201ENST00000344935 DALRD3Q5D0E6 543 aaKnown RBP11.2□□□□□ -0.62
CPSF4L-201ENST00000344935 INTS5Q6P9B9 1019 aaKnown RBP11.2□□□□□ -0.62
CPSF4L-201ENST00000344935 JMYQ8N9B5 988 aa11.2□□□□□ -0.62
CPSF4L-201ENST00000344935 SLC52A2Q9HAB3 445 aa11.2□□□□□ -0.62
CPSF4L-201ENST00000344935 CCDC88AQ3V6T2 1871 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms