RNA–Protein interactions for RNA: ENST00000344726.9

HMGN3-202, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN3, Length 872 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-202ENST00000344726 PLEKHO1Q53GL0 409 aaPredicted RBP19.57■□□□□ 0.72
HMGN3-202ENST00000344726 ZNF530Q6P9A1 599 aaPredicted RBP19.57■□□□□ 0.72
HMGN3-202ENST00000344726 SMIM5Q71RC9 77 aa19.57■□□□□ 0.72
HMGN3-202ENST00000344726 VIRMAQ69YN4 1812 aaKnown RBP19.57■□□□□ 0.72
HMGN3-202ENST00000344726 LOC102724428A0A0B4J2F2 783 aa19.56■□□□□ 0.72
HMGN3-202ENST00000344726 SIK1P57059 783 aa19.56■□□□□ 0.72
HMGN3-202ENST00000344726 ITPK1Q13572 414 aa19.56■□□□□ 0.72
HMGN3-202ENST00000344726 LINC00116Q8NCU8 138 aa19.56■□□□□ 0.72
HMGN3-202ENST00000344726 MAP3K5Q99683 1374 aa19.56■□□□□ 0.72
HMGN3-202ENST00000344726 DCAF5Q96JK2 942 aa19.55■□□□□ 0.72
HMGN3-202ENST00000344726 AMOTQ4VCS5 1084 aa19.54■□□□□ 0.72
HMGN3-202ENST00000344726 SLC4A9Q96Q91 983 aa19.54■□□□□ 0.72
HMGN3-202ENST00000344726 SCN11AQ9UI33 1791 aa19.54■□□□□ 0.72
HMGN3-202ENST00000344726 ERVV-2B6SEH9 535 aa19.53■□□□□ 0.72
HMGN3-202ENST00000344726 MSL1Q68DK7 614 aa19.53■□□□□ 0.72
HMGN3-202ENST00000344726 ZNF831Q5JPB2 1677 aa19.52■□□□□ 0.72
HMGN3-202ENST00000344726 COL5A3P25940 1745 aaPredicted RBP19.52■□□□□ 0.72
HMGN3-202ENST00000344726 DIAPH1O60610 1272 aaKnown RBP19.52■□□□□ 0.72
HMGN3-202ENST00000344726 HMOX1P09601 288 aa19.52■□□□□ 0.72
HMGN3-202ENST00000344726 HSP90AB1P08238 724 aaKnown RBP19.51■□□□□ 0.71
HMGN3-202ENST00000344726 AK7Q96M32 723 aa19.51■□□□□ 0.71
HMGN3-202ENST00000344726 PHF14O94880 888 aa19.5■□□□□ 0.71
HMGN3-202ENST00000344726 POLD1P28340 1107 aa19.5■□□□□ 0.71
HMGN3-202ENST00000344726 ATP6V1AP38606 617 aa19.5■□□□□ 0.71
HMGN3-202ENST00000344726 C1orf141Q5JVX7 400 aa19.49■□□□□ 0.71
HMGN3-202ENST00000344726 NLGN2Q8NFZ4 835 aa19.49■□□□□ 0.71
HMGN3-202ENST00000344726 ADAMTS7Q9UKP4 1686 aa19.49■□□□□ 0.71
HMGN3-202ENST00000344726 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.48■□□□□ 0.71
HMGN3-202ENST00000344726 CABP4P57796 275 aa19.48■□□□□ 0.71
HMGN3-202ENST00000344726 KLHL34Q8N239 644 aa19.48■□□□□ 0.71
HMGN3-202ENST00000344726 TJP1Q07157 1748 aa19.48■□□□□ 0.71
HMGN3-202ENST00000344726 MRC1P22897 1456 aa19.48■□□□□ 0.71
HMGN3-202ENST00000344726 GOLGB1Q14789 3259 aaKnown RBP19.47■□□□□ 0.71
HMGN3-202ENST00000344726 PPP2R1AP30153 589 aa19.46■□□□□ 0.71
HMGN3-202ENST00000344726 AKAP4Q5JQC9 854 aa19.46■□□□□ 0.71
HMGN3-202ENST00000344726 NFATC2IPQ8NCF5 419 aa19.46■□□□□ 0.71
HMGN3-202ENST00000344726 FLAD1Q8NFF5 587 aa19.46■□□□□ 0.71
HMGN3-202ENST00000344726 RBM42Q9BTD8 480 aaKnown RBP19.46■□□□□ 0.71
HMGN3-202ENST00000344726 LGR6Q9HBX8 967 aa19.46■□□□□ 0.71
HMGN3-202ENST00000344726 CICQ96RK0 1608 aaPredicted RBP19.46■□□□□ 0.71
HMGN3-202ENST00000344726 GNPATO15228 680 aa19.45■□□□□ 0.7
HMGN3-202ENST00000344726 YY1P25490 414 aa19.45■□□□□ 0.7
HMGN3-202ENST00000344726 SSFA2P28290 1259 aa19.45■□□□□ 0.7
HMGN3-202ENST00000344726 MTHFSDQ2M296 383 aaKnown RBP19.45■□□□□ 0.7
HMGN3-202ENST00000344726 MYH14Q7Z406 1995 aaKnown RBP19.44■□□□□ 0.7
HMGN3-202ENST00000344726 U2SURPO15042 1029 aaKnown RBP19.44■□□□□ 0.7
HMGN3-202ENST00000344726 HMGB2P26583 209 aaKnown RBP19.43■□□□□ 0.7
HMGN3-202ENST00000344726 C4AP0C0L4 1744 aa19.42■□□□□ 0.7
HMGN3-202ENST00000344726 PTCD1O75127 700 aaKnown RBP19.42■□□□□ 0.7
HMGN3-202ENST00000344726 RNMTO43148 476 aaKnown RBP19.41■□□□□ 0.7
HMGN3-202ENST00000344726 SLC52A2Q9HAB3 445 aa19.41■□□□□ 0.7
HMGN3-202ENST00000344726 CNTNAP4Q9C0A0 1308 aa19.41■□□□□ 0.7
HMGN3-202ENST00000344726 KCPQ6ZWJ8 1503 aa19.41■□□□□ 0.7
HMGN3-202ENST00000344726 CFAP53Q96M91 514 aa19.39■□□□□ 0.69
HMGN3-202ENST00000344726 SLC39A6Q13433 755 aa19.38■□□□□ 0.69
HMGN3-202ENST00000344726 RC3H1Q5TC82 1133 aaKnown RBP19.38■□□□□ 0.69
HMGN3-202ENST00000344726 UBR2Q8IWV8 1755 aa19.37■□□□□ 0.69
HMGN3-202ENST00000344726 YBX3P16989 372 aaKnown RBP eCLIP19.37■□□□□ 0.696e-6■□□□□ 10.6
HMGN3-202ENST00000344726 RSPH6AQ9H0K4 717 aa19.37■□□□□ 0.69
HMGN3-202ENST00000344726 RTCBQ9Y3I0 505 aaKnown RBP19.37■□□□□ 0.69
HMGN3-202ENST00000344726 CHD4Q14839 1912 aa19.37■□□□□ 0.69
HMGN3-202ENST00000344726 SIPA1L3O60292 1781 aaPredicted RBP19.37■□□□□ 0.69
HMGN3-202ENST00000344726 RPS6KA4O75676 772 aa19.36■□□□□ 0.69
HMGN3-202ENST00000344726 GPR162Q16538 588 aa19.36■□□□□ 0.69
HMGN3-202ENST00000344726 ARHGEF1Q92888 912 aaKnown RBP19.36■□□□□ 0.69
HMGN3-202ENST00000344726 PHACTR3Q96KR7 559 aa19.36■□□□□ 0.69
HMGN3-202ENST00000344726 KIAA1551Q9HCM1 1747 aa19.35■□□□□ 0.69
HMGN3-202ENST00000344726 PRKAR2BP31323 418 aa19.35■□□□□ 0.69
HMGN3-202ENST00000344726 CRKLP46109 303 aaKnown RBP19.35■□□□□ 0.69
HMGN3-202ENST00000344726 TRAPPC3LQ5T215 181 aa19.35■□□□□ 0.69
HMGN3-202ENST00000344726 PELP1Q8IZL8 1130 aaKnown RBP19.35■□□□□ 0.69
HMGN3-202ENST00000344726 CD2APQ9Y5K6 639 aa19.35■□□□□ 0.69
HMGN3-202ENST00000344726 DDX10Q13206 875 aaKnown RBP19.34■□□□□ 0.69
HMGN3-202ENST00000344726 DNAJC10Q8IXB1 793 aa19.34■□□□□ 0.69
HMGN3-202ENST00000344726 IL17REQ8NFR9 667 aa19.34■□□□□ 0.69
HMGN3-202ENST00000344726 U2AF1L5P0DN76 240 aaPredicted RBP19.33■□□□□ 0.68
HMGN3-202ENST00000344726 GYS1P13807 737 aa19.33■□□□□ 0.68
HMGN3-202ENST00000344726 U2AF1Q01081 240 aaKnown RBP eCLIP19.33■□□□□ 0.687e-10■■■■■ 33.4
HMGN3-202ENST00000344726 INTS5Q6P9B9 1019 aaKnown RBP19.33■□□□□ 0.68
HMGN3-202ENST00000344726 NUDCQ9Y266 331 aa19.33■□□□□ 0.68
HMGN3-202ENST00000344726 KIF13BQ9NQT8 1826 aa19.32■□□□□ 0.68
HMGN3-202ENST00000344726 MMP10P09238 476 aa19.32■□□□□ 0.68
HMGN3-202ENST00000344726 GAS2L2Q8NHY3 880 aa19.32■□□□□ 0.68
HMGN3-202ENST00000344726 GNAT3A8MTJ3 354 aa19.31■□□□□ 0.68
HMGN3-202ENST00000344726 DLG5Q8TDM6 1919 aa19.31■□□□□ 0.68
HMGN3-202ENST00000344726 SRP68Q9UHB9 627 aaKnown RBP19.3■□□□□ 0.68
HMGN3-202ENST00000344726 CEMIPQ8WUJ3 1361 aa19.3■□□□□ 0.68
HMGN3-202ENST00000344726 CYP19A1P11511 503 aaPredicted RBP19.29■□□□□ 0.68
HMGN3-202ENST00000344726 RFC4P35249 363 aa19.29■□□□□ 0.68
HMGN3-202ENST00000344726 ZNF784Q8NCA9 323 aaPredicted RBP19.29■□□□□ 0.68
HMGN3-202ENST00000344726 WWC3Q9ULE0 1092 aa19.29■□□□□ 0.68
HMGN3-202ENST00000344726 USP42Q9H9J4 1324 aaKnown RBP19.28■□□□□ 0.68
HMGN3-202ENST00000344726 C10orf71Q711Q0 1435 aa19.28■□□□□ 0.68
HMGN3-202ENST00000344726 FCHSD2O94868 740 aa19.28■□□□□ 0.68
HMGN3-202ENST00000344726 CCDC87Q9NVE4 849 aa19.28■□□□□ 0.68
HMGN3-202ENST00000344726 PXDNLA1KZ92 1463 aa19.28■□□□□ 0.68
HMGN3-202ENST00000344726 SOS1Q07889 1333 aaPredicted RBP19.27■□□□□ 0.68
HMGN3-202ENST00000344726 N4BP2Q86UW6 1770 aaPredicted RBP19.27■□□□□ 0.68
HMGN3-202ENST00000344726 NLGN1Q8N2Q7 840 aa19.27■□□□□ 0.68
HMGN3-202ENST00000344726 ZBTB1Q9Y2K1 713 aa19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms