RNA–Protein interactions for RNA: ENST00000344376.9

ATG4B-201, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 1,566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-201ENST00000344376 TUBGCP6Q96RT7 1819 aa21.54■■□□□ 1.04
ATG4B-201ENST00000344376 SGIP1Q9BQI5 828 aa21.53■■□□□ 1.04
ATG4B-201ENST00000344376 RBM42Q9BTD8 480 aaKnown RBP21.53■■□□□ 1.04
ATG4B-201ENST00000344376 NFATC2IPQ8NCF5 419 aa21.53■■□□□ 1.04
ATG4B-201ENST00000344376 ARXQ96QS3 562 aa21.53■■□□□ 1.04
ATG4B-201ENST00000344376 TAF1LQ8IZX4 1826 aa21.53■■□□□ 1.04
ATG4B-201ENST00000344376 COL23A1Q86Y22 540 aaPredicted RBP21.52■■□□□ 1.04
ATG4B-201ENST00000344376 LINC00116Q8NCU8 138 aa21.52■■□□□ 1.04
ATG4B-201ENST00000344376 GAS2L2Q8NHY3 880 aa21.52■■□□□ 1.04
ATG4B-201ENST00000344376 DCAF8L1A6NGE4 600 aa21.5■■□□□ 1.03
ATG4B-201ENST00000344376 ZEB1P37275 1124 aaPredicted RBP21.5■■□□□ 1.03
ATG4B-201ENST00000344376 ITPK1Q13572 414 aa21.5■■□□□ 1.03
ATG4B-201ENST00000344376 SLC52A2Q9HAB3 445 aa21.5■■□□□ 1.03
ATG4B-201ENST00000344376 RNMTO43148 476 aaKnown RBP21.49■■□□□ 1.03
ATG4B-201ENST00000344376 U2AF1L5P0DN76 240 aaPredicted RBP21.49■■□□□ 1.03
ATG4B-201ENST00000344376 U2AF1Q01081 240 aaKnown RBP eCLIP21.49■■□□□ 1.03
ATG4B-201ENST00000344376 SCN11AQ9UI33 1791 aa21.49■■□□□ 1.03
ATG4B-201ENST00000344376 SSFA2P28290 1259 aa21.48■■□□□ 1.03
ATG4B-201ENST00000344376 LGR6Q9HBX8 967 aa21.48■■□□□ 1.03
ATG4B-201ENST00000344376 GNPATO15228 680 aa21.48■■□□□ 1.03
ATG4B-201ENST00000344376 PHF14O94880 888 aa21.48■■□□□ 1.03
ATG4B-201ENST00000344376 PRKAR2BP31323 418 aa21.48■■□□□ 1.03
ATG4B-201ENST00000344376 FHDC1Q9C0D6 1143 aaPredicted RBP21.48■■□□□ 1.03
ATG4B-201ENST00000344376 RSPH6AQ9H0K4 717 aa21.48■■□□□ 1.03
ATG4B-201ENST00000344376 MAP3K5Q99683 1374 aa21.48■■□□□ 1.03
ATG4B-201ENST00000344376 MRC1P22897 1456 aa21.48■■□□□ 1.03
ATG4B-201ENST00000344376 PTCD1O75127 700 aaKnown RBP21.47■■□□□ 1.03
ATG4B-201ENST00000344376 DDX10Q13206 875 aaKnown RBP21.47■■□□□ 1.03
ATG4B-201ENST00000344376 ZNF831Q5JPB2 1677 aa21.46■■□□□ 1.03
ATG4B-201ENST00000344376 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.46■■□□□ 1.03
ATG4B-201ENST00000344376 GNAT3A8MTJ3 354 aa21.45■■□□□ 1.02
ATG4B-201ENST00000344376 RALBP1Q15311 655 aa21.45■■□□□ 1.02
ATG4B-201ENST00000344376 SLC4A9Q96Q91 983 aa21.45■■□□□ 1.02
ATG4B-201ENST00000344376 FCHSD2O94868 740 aa21.44■■□□□ 1.02
ATG4B-201ENST00000344376 SYT17Q9BSW7 474 aa21.44■■□□□ 1.02
ATG4B-201ENST00000344376 MSL1Q68DK7 614 aa21.44■■□□□ 1.02
ATG4B-201ENST00000344376 ADAMTS7Q9UKP4 1686 aa21.43■■□□□ 1.02
ATG4B-201ENST00000344376 UBR3Q6ZT12 1888 aa21.43■■□□□ 1.02
ATG4B-201ENST00000344376 CNTNAP4Q9C0A0 1308 aa21.43■■□□□ 1.02
ATG4B-201ENST00000344376 RC3H1Q5TC82 1133 aaKnown RBP21.43■■□□□ 1.02
ATG4B-201ENST00000344376 KLHL34Q8N239 644 aa21.43■■□□□ 1.02
ATG4B-201ENST00000344376 RTCBQ9Y3I0 505 aaKnown RBP21.43■■□□□ 1.02
ATG4B-201ENST00000344376 COL24A1Q17RW2 1714 aa21.43■■□□□ 1.02
ATG4B-201ENST00000344376 TEFQ10587 303 aa21.42■■□□□ 1.02
ATG4B-201ENST00000344376 AMIGO3Q86WK7 504 aa21.42■■□□□ 1.02
ATG4B-201ENST00000344376 PHACTR3Q96KR7 559 aa21.42■■□□□ 1.02
ATG4B-201ENST00000344376 NEFMP07197 916 aa21.41■■□□□ 1.02
ATG4B-201ENST00000344376 ADRA2BP18089 450 aa21.4■■□□□ 1.02
ATG4B-201ENST00000344376 TRAPPC3LQ5T215 181 aa21.4■■□□□ 1.02
ATG4B-201ENST00000344376 SMIM5Q71RC9 77 aa21.4■■□□□ 1.02
ATG4B-201ENST00000344376 TTC5Q8N0Z6 440 aa21.4■■□□□ 1.02
ATG4B-201ENST00000344376 COL5A3P25940 1745 aaPredicted RBP21.39■■□□□ 1.01
ATG4B-201ENST00000344376 SLC39A6Q13433 755 aa21.39■■□□□ 1.01
ATG4B-201ENST00000344376 RPS6KA4O75676 772 aa21.38■■□□□ 1.01
ATG4B-201ENST00000344376 IL17REQ8NFR9 667 aa21.38■■□□□ 1.01
ATG4B-201ENST00000344376 RTF1Q92541 710 aaKnown RBP21.38■■□□□ 1.01
ATG4B-201ENST00000344376 CICQ96RK0 1608 aaPredicted RBP21.37■■□□□ 1.01
ATG4B-201ENST00000344376 CRKLP46109 303 aaKnown RBP21.37■■□□□ 1.01
ATG4B-201ENST00000344376 VIRMAQ69YN4 1812 aaKnown RBP21.37■■□□□ 1.01
ATG4B-201ENST00000344376 PNNQ9H307 717 aaKnown RBP21.36■■□□□ 1.01
ATG4B-201ENST00000344376 CEMIPQ8WUJ3 1361 aa21.36■■□□□ 1.01
ATG4B-201ENST00000344376 DNAJC10Q8IXB1 793 aa21.36■■□□□ 1.01
ATG4B-201ENST00000344376 VSIG10Q8N0Z9 540 aa21.36■■□□□ 1.01
ATG4B-201ENST00000344376 KCPQ6ZWJ8 1503 aa21.35■■□□□ 1.01
ATG4B-201ENST00000344376 MYBBP1AQ9BQG0 1328 aaKnown RBP21.35■■□□□ 1.01
ATG4B-201ENST00000344376 TJP1Q07157 1748 aa21.35■■□□□ 1.01
ATG4B-201ENST00000344376 RFC4P35249 363 aa21.35■■□□□ 1.01
ATG4B-201ENST00000344376 ARHGEF1Q92888 912 aaKnown RBP21.34■■□□□ 1.01
ATG4B-201ENST00000344376 CCDC87Q9NVE4 849 aa21.33■■□□□ 1.01
ATG4B-201ENST00000344376 HTATSF1O43719 755 aaKnown RBP21.32■■□□□ 1
ATG4B-201ENST00000344376 ZNF790Q6PG37 636 aa21.32■■□□□ 1
ATG4B-201ENST00000344376 NLGN1Q8N2Q7 840 aa21.32■■□□□ 1
ATG4B-201ENST00000344376 MAPK8IP3Q9UPT6 1336 aa21.31■■□□□ 1
ATG4B-201ENST00000344376 BTBD11A6QL63 1104 aa21.31■■□□□ 1
ATG4B-201ENST00000344376 CYP19A1P11511 503 aaPredicted RBP21.31■■□□□ 1
ATG4B-201ENST00000344376 CD2APQ9Y5K6 639 aa21.31■■□□□ 1
ATG4B-201ENST00000344376 INTS5Q6P9B9 1019 aaKnown RBP21.3■■□□□ 1
ATG4B-201ENST00000344376 MCM10Q7L590 875 aa21.3■■□□□ 1
ATG4B-201ENST00000344376 UBR2Q8IWV8 1755 aa21.29■■□□□ 1
ATG4B-201ENST00000344376 STARD3NLO95772 234 aa21.29■■□□□ 1
ATG4B-201ENST00000344376 GPR162Q16538 588 aa21.29■■□□□ 1
ATG4B-201ENST00000344376 NLGN2Q8NFZ4 835 aa21.29■■□□□ 1
ATG4B-201ENST00000344376 FMNL2Q96PY5 1086 aa21.29■■□□□ 1
ATG4B-201ENST00000344376 SIPA1L3O60292 1781 aaPredicted RBP21.28■■□□□ 1
ATG4B-201ENST00000344376 MMP10P09238 476 aa21.28■■□□□ 1
ATG4B-201ENST00000344376 ZNF496Q96IT1 587 aaPredicted RBP21.28■■□□□ 1
ATG4B-201ENST00000344376 PLEKHF1Q96S99 279 aa21.28■■□□□ 1
ATG4B-201ENST00000344376 TEX13AQ9BXU3 409 aaPredicted RBP21.28■■□□□ 1
ATG4B-201ENST00000344376 HEG1Q9ULI3 1381 aa21.28■■□□□ 1
ATG4B-201ENST00000344376 MYH14Q7Z406 1995 aaKnown RBP21.28■■□□□ 1
ATG4B-201ENST00000344376 GYS1P13807 737 aa21.27■□□□□ 0.99
ATG4B-201ENST00000344376 NFE2L2Q16236 605 aa21.27■□□□□ 0.99
ATG4B-201ENST00000344376 PELP1Q8IZL8 1130 aaKnown RBP21.27■□□□□ 0.99
ATG4B-201ENST00000344376 SOS1Q07889 1333 aaPredicted RBP21.27■□□□□ 0.99
ATG4B-201ENST00000344376 USP42Q9H9J4 1324 aaKnown RBP21.26■□□□□ 0.99
ATG4B-201ENST00000344376 ZBTB1Q9Y2K1 713 aa21.26■□□□□ 0.99
ATG4B-201ENST00000344376 C4AP0C0L4 1744 aa21.25■□□□□ 0.99
ATG4B-201ENST00000344376 ZPR1O75312 459 aa21.25■□□□□ 0.99
ATG4B-201ENST00000344376 YY1P25490 414 aa21.25■□□□□ 0.99
ATG4B-201ENST00000344376 DCTN1Q14203 1278 aa21.25■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms