RNA–Protein interactions for RNA: ENST00000343508.7

CSMD3-203, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 13,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-203ENST00000343508 CAMK4Q16566 473 aa5.63□□□□□ -1.51
CSMD3-203ENST00000343508 DCTN1Q14203 1278 aa5.63□□□□□ -1.51
CSMD3-203ENST00000343508 KRT222Q8N1A0 295 aa5.63□□□□□ -1.51
CSMD3-203ENST00000343508 ARHGEF5Q12774 1597 aa5.63□□□□□ -1.51
CSMD3-203ENST00000343508 CASQ1P31415 396 aa5.63□□□□□ -1.51
CSMD3-203ENST00000343508 FMNL2Q96PY5 1086 aa5.63□□□□□ -1.51
CSMD3-203ENST00000343508 NOL10Q9BSC4 688 aaKnown RBP5.63□□□□□ -1.51
CSMD3-203ENST00000343508 HMGB1P09429 215 aaKnown RBP5.63□□□□□ -1.51
CSMD3-203ENST00000343508 PCMTD1Q96MG8 357 aaPredicted RBP5.63□□□□□ -1.51
CSMD3-203ENST00000343508 SFPQP23246 707 aaKnown RBP eCLIP5.63□□□□□ -1.51
CSMD3-203ENST00000343508 CEP135Q66GS9 1140 aa5.63□□□□□ -1.51
CSMD3-203ENST00000343508 CEP170Q5SW79 1584 aa5.63□□□□□ -1.51
CSMD3-203ENST00000343508 TTC5Q8N0Z6 440 aa5.63□□□□□ -1.51
CSMD3-203ENST00000343508 SRGAP3O43295 1099 aa5.63□□□□□ -1.51
CSMD3-203ENST00000343508 KDM4AO75164 1064 aa5.63□□□□□ -1.51
CSMD3-203ENST00000343508 ZSCAN22P10073 491 aaPredicted RBP5.63□□□□□ -1.51
CSMD3-203ENST00000343508 FBXW7Q969H0 707 aa5.63□□□□□ -1.51
CSMD3-203ENST00000343508 ZSCAN16Q9H4T2 348 aaPredicted RBP5.63□□□□□ -1.51
CSMD3-203ENST00000343508 ZNF500O60304 480 aaPredicted RBP5.63□□□□□ -1.51
CSMD3-203ENST00000343508 CEBPZQ03701 1054 aaKnown RBP5.63□□□□□ -1.51
CSMD3-203ENST00000343508 TESK2Q96S53 571 aa5.63□□□□□ -1.51
CSMD3-203ENST00000343508 FAM107BQ9H098 131 aa5.63□□□□□ -1.51
CSMD3-203ENST00000343508 JAKMIP1Q96N16 626 aaKnown RBP5.63□□□□□ -1.51
CSMD3-203ENST00000343508 SPDYE4A6NLX3 237 aa5.63□□□□□ -1.51
CSMD3-203ENST00000343508 MYRIPQ8NFW9 859 aa5.63□□□□□ -1.51
CSMD3-203ENST00000343508 CAGE1Q8TC20 777 aa5.63□□□□□ -1.51
CSMD3-203ENST00000343508 RBM27Q9P2N5 1060 aaKnown RBP5.63□□□□□ -1.51
CSMD3-203ENST00000343508 TXLNBQ8N3L3 684 aa5.62□□□□□ -1.51
CSMD3-203ENST00000343508 MYO6Q9UM54 1294 aa5.62□□□□□ -1.51
CSMD3-203ENST00000343508 PRDM15P57071 1507 aaPredicted RBP5.62□□□□□ -1.51
CSMD3-203ENST00000343508 A0A0G2JS52 829 aa5.62□□□□□ -1.51
CSMD3-203ENST00000343508 FSD2A1L4K1 749 aa5.62□□□□□ -1.51
CSMD3-203ENST00000343508 STK38Q15208 465 aa5.62□□□□□ -1.51
CSMD3-203ENST00000343508 CEP89Q96ST8 783 aa5.62□□□□□ -1.51
CSMD3-203ENST00000343508 LRRIQ1Q96JM4 1722 aa5.62□□□□□ -1.51
CSMD3-203ENST00000343508 TUBB4BP68371 445 aa5.62□□□□□ -1.51
CSMD3-203ENST00000343508 OGFRQ9NZT2 677 aa5.62□□□□□ -1.51
CSMD3-203ENST00000343508 RTEL1-TNFRSF6BF6WH68 1400 aa5.62□□□□□ -1.51
CSMD3-203ENST00000343508 PPP1R9BQ96SB3 815 aa5.62□□□□□ -1.51
CSMD3-203ENST00000343508 NFXL1Q6ZNB6 911 aa5.62□□□□□ -1.51
CSMD3-203ENST00000343508 CCDC83Q8IWF9 413 aa5.62□□□□□ -1.51
CSMD3-203ENST00000343508 GJB2P29033 226 aa5.62□□□□□ -1.51
CSMD3-203ENST00000343508 RIC3Q7Z5B4 369 aa5.62□□□□□ -1.51
CSMD3-203ENST00000343508 TOMM22Q9NS69 142 aa5.62□□□□□ -1.51
CSMD3-203ENST00000343508 ZBTB40Q9NUA8 1239 aa5.62□□□□□ -1.51
CSMD3-203ENST00000343508 A2MP01023 1474 aa5.62□□□□□ -1.51
CSMD3-203ENST00000343508 KIAA0754O94854 1291 aa5.62□□□□□ -1.51
CSMD3-203ENST00000343508 MAGI3Q5TCQ9 1506 aa5.62□□□□□ -1.51
CSMD3-203ENST00000343508 MAP9Q49MG5 647 aa5.62□□□□□ -1.51
CSMD3-203ENST00000343508 MPNDQ8N594 471 aa5.62□□□□□ -1.51
CSMD3-203ENST00000343508 CABP1Q9NZU7 370 aa5.62□□□□□ -1.51
CSMD3-203ENST00000343508 EXOC6BQ9Y2D4 811 aa5.62□□□□□ -1.51
CSMD3-203ENST00000343508 CDKL5O76039 1030 aa5.61□□□□□ -1.51
CSMD3-203ENST00000343508 SULT6B1Q6IMI4 303 aa5.61□□□□□ -1.51
CSMD3-203ENST00000343508 FAM200AQ8TCP9 573 aa5.61□□□□□ -1.51
CSMD3-203ENST00000343508 PIBF1Q8WXW3 757 aa5.61□□□□□ -1.51
CSMD3-203ENST00000343508 DDX11Q96FC9 970 aa5.61□□□□□ -1.51
CSMD3-203ENST00000343508 LTV1Q96GA3 475 aaPredicted RBP5.61□□□□□ -1.51
CSMD3-203ENST00000343508 TTC37Q6PGP7 1564 aa5.61□□□□□ -1.51
CSMD3-203ENST00000343508 NUTM2FA1L443 756 aa5.61□□□□□ -1.51
CSMD3-203ENST00000343508 USP48Q86UV5 1035 aa5.61□□□□□ -1.51
CSMD3-203ENST00000343508 HCLS1P14317 486 aaPredicted RBP5.61□□□□□ -1.51
CSMD3-203ENST00000343508 STK3Q13188 491 aa5.61□□□□□ -1.51
CSMD3-203ENST00000343508 SDSP20132 328 aa5.61□□□□□ -1.51
CSMD3-203ENST00000343508 AXDND1Q5T1B0 1012 aaPredicted RBP5.61□□□□□ -1.51
CSMD3-203ENST00000343508 PPFIBP1Q86W92 1011 aa5.61□□□□□ -1.51
CSMD3-203ENST00000343508 POTEB2H3BUK9 544 aa5.61□□□□□ -1.51
CSMD3-203ENST00000343508 MAP4K4O95819 1239 aaPredicted RBP5.61□□□□□ -1.51
CSMD3-203ENST00000343508 ZNF165P49910 485 aa5.61□□□□□ -1.51
CSMD3-203ENST00000343508 SNW1Q13573 536 aaKnown RBP5.61□□□□□ -1.51
CSMD3-203ENST00000343508 FAM177A1Q8N128 213 aaPredicted RBP5.61□□□□□ -1.51
CSMD3-203ENST00000343508 CCDC150Q8NCX0 1101 aa5.61□□□□□ -1.51
CSMD3-203ENST00000343508 GOLGA6L10A6NI86 522 aa5.61□□□□□ -1.51
CSMD3-203ENST00000343508 HDGFL1Q5TGJ6 251 aa5.61□□□□□ -1.51
CSMD3-203ENST00000343508 PUS7Q96PZ0 661 aaKnown RBP5.61□□□□□ -1.51
CSMD3-203ENST00000343508 SART3Q15020 963 aaKnown RBP5.61□□□□□ -1.51
CSMD3-203ENST00000343508 STX1AQ16623 288 aa5.61□□□□□ -1.51
CSMD3-203ENST00000343508 TULP1O00294 542 aaPredicted RBP5.61□□□□□ -1.51
CSMD3-203ENST00000343508 DCTPP1Q9H773 170 aa5.61□□□□□ -1.51
CSMD3-203ENST00000343508 CDC42BPAQ5VT25 1732 aa5.6□□□□□ -1.51
CSMD3-203ENST00000343508 IVLP07476 585 aa5.6□□□□□ -1.51
CSMD3-203ENST00000343508 GNAT3A8MTJ3 354 aa5.6□□□□□ -1.51
CSMD3-203ENST00000343508 CFAP100Q494V2 611 aa5.6□□□□□ -1.51
CSMD3-203ENST00000343508 ZFYVE9O95405 1425 aa5.6□□□□□ -1.51
CSMD3-203ENST00000343508 CSB-PGBD3P0DP91 1061 aa5.6□□□□□ -1.51
CSMD3-203ENST00000343508 CCDC102AQ96A19 550 aa5.6□□□□□ -1.51
CSMD3-203ENST00000343508 EVI5LQ96CN4 794 aa5.6□□□□□ -1.51
CSMD3-203ENST00000343508 NEUROD6Q96NK8 337 aa5.6□□□□□ -1.51
CSMD3-203ENST00000343508 LUC7LQ9NQ29 371 aaKnown RBP5.6□□□□□ -1.51
CSMD3-203ENST00000343508 KIF5CO60282 957 aa5.6□□□□□ -1.51
CSMD3-203ENST00000343508 JAKMIP3Q5VZ66 844 aa5.6□□□□□ -1.51
CSMD3-203ENST00000343508 ARHGAP30Q7Z6I6 1101 aaPredicted RBP5.6□□□□□ -1.51
CSMD3-203ENST00000343508 SRRTQ9BXP5 876 aaKnown RBP5.6□□□□□ -1.51
CSMD3-203ENST00000343508 AMOTL1Q8IY63 956 aa5.6□□□□□ -1.51
CSMD3-203ENST00000343508 ZNHIT6Q9NWK9 470 aaKnown RBP5.6□□□□□ -1.51
CSMD3-203ENST00000343508 ADCY10Q96PN6 1610 aa5.6□□□□□ -1.51
CSMD3-203ENST00000343508 RLBP1P12271 317 aa5.6□□□□□ -1.51
CSMD3-203ENST00000343508 CLASP1Q7Z460 1538 aa5.6□□□□□ -1.51
CSMD3-203ENST00000343508 TXLNAP40222 546 aa5.6□□□□□ -1.51
CSMD3-203ENST00000343508 ZNF397Q8NF99 534 aaPredicted RBP5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms