RNA–Protein interactions for RNA: ENST00000342415.5

SNRNP48-201, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP48, Length 4,173 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-201ENST00000342415 USP48Q86UV5 1035 aa14.82□□□□□ -0.04
SNRNP48-201ENST00000342415 INSRP06213 1382 aa14.82□□□□□ -0.04
SNRNP48-201ENST00000342415 PSMA5P28066 241 aa14.82□□□□□ -0.04
SNRNP48-201ENST00000342415 ESCO1Q5FWF5 840 aa14.82□□□□□ -0.04
SNRNP48-201ENST00000342415 PDCL3Q9H2J4 239 aa14.82□□□□□ -0.04
SNRNP48-201ENST00000342415 A0A0U1RQG5 324 aaPredicted RBP14.82□□□□□ -0.04
SNRNP48-201ENST00000342415 GSPT1P15170 499 aaKnown RBP14.82□□□□□ -0.04
SNRNP48-201ENST00000342415 HMGN5P82970 282 aaKnown RBP14.82□□□□□ -0.04
SNRNP48-201ENST00000342415 EIF4A2Q14240 407 aaKnown RBP14.82□□□□□ -0.04
SNRNP48-201ENST00000342415 SPATA32Q96LK8 384 aa14.82□□□□□ -0.04
SNRNP48-201ENST00000342415 RAB11FIP3O75154 756 aa14.81□□□□□ -0.04
SNRNP48-201ENST00000342415 ATP2B1P20020 1258 aa14.81□□□□□ -0.04
SNRNP48-201ENST00000342415 ESYT1Q9BSJ8 1104 aa14.81□□□□□ -0.04
SNRNP48-201ENST00000342415 MPRIPQ6WCQ1 1025 aa14.81□□□□□ -0.04
SNRNP48-201ENST00000342415 KIF1BPQ96EK5 621 aa14.81□□□□□ -0.04
SNRNP48-201ENST00000342415 NUP62CLQ9H1M0 184 aa14.81□□□□□ -0.04
SNRNP48-201ENST00000342415 ZHX1Q9UKY1 873 aaPredicted RBP14.81□□□□□ -0.04
SNRNP48-201ENST00000342415 PI4KAP2A4QPH2 592 aa14.81□□□□□ -0.04
SNRNP48-201ENST00000342415 C17orf53Q8N3J3 647 aaPredicted RBP14.81□□□□□ -0.04
SNRNP48-201ENST00000342415 PI4KAP1Q8N8J0 262 aa14.81□□□□□ -0.04
SNRNP48-201ENST00000342415 EIF2AK4Q9P2K8 1649 aaKnown RBP14.8□□□□□ -0.04
SNRNP48-201ENST00000342415 PDCP20941 246 aa14.8□□□□□ -0.04
SNRNP48-201ENST00000342415 SPDYE4A6NLX3 237 aa14.8□□□□□ -0.04
SNRNP48-201ENST00000342415 STX6O43752 255 aa14.8□□□□□ -0.04
SNRNP48-201ENST00000342415 GUCY1B3Q02153 619 aa14.8□□□□□ -0.04
SNRNP48-201ENST00000342415 CCDC85AQ96PX6 553 aaPredicted RBP14.8□□□□□ -0.04
SNRNP48-201ENST00000342415 PES1O00541 588 aaKnown RBP14.8□□□□□ -0.04
SNRNP48-201ENST00000342415 LETM1O95202 739 aaPredicted RBP14.8□□□□□ -0.04
SNRNP48-201ENST00000342415 BTBD11A6QL63 1104 aa14.79□□□□□ -0.04
SNRNP48-201ENST00000342415 ME1P48163 572 aa14.79□□□□□ -0.04
SNRNP48-201ENST00000342415 LIMCH1Q9UPQ0 1083 aa14.79□□□□□ -0.04
SNRNP48-201ENST00000342415 ACEP12821 1306 aa14.79□□□□□ -0.04
SNRNP48-201ENST00000342415 GJB2P29033 226 aa14.79□□□□□ -0.04
SNRNP48-201ENST00000342415 CCDC183Q5T5S1 534 aa14.79□□□□□ -0.04
SNRNP48-201ENST00000342415 C16orf45Q96MC5 204 aaPredicted RBP14.79□□□□□ -0.04
SNRNP48-201ENST00000342415 KINO60870 393 aaKnown RBP14.79□□□□□ -0.04
SNRNP48-201ENST00000342415 RAPGEF4Q8WZA2 1011 aa14.79□□□□□ -0.04
SNRNP48-201ENST00000342415 EIF4G3O43432 1585 aaKnown RBP14.79□□□□□ -0.04
SNRNP48-201ENST00000342415 SMC2O95347 1197 aa14.78□□□□□ -0.04
SNRNP48-201ENST00000342415 PBRM1Q86U86 1689 aa14.78□□□□□ -0.04
SNRNP48-201ENST00000342415 FAM177A1Q8N128 213 aaPredicted RBP14.78□□□□□ -0.04
SNRNP48-201ENST00000342415 TSC1Q92574 1164 aa14.78□□□□□ -0.04
SNRNP48-201ENST00000342415 ZKSCAN5Q9Y2L8 839 aa14.78□□□□□ -0.04
SNRNP48-201ENST00000342415 PTPRCP08575 1304 aa14.78□□□□□ -0.04
SNRNP48-201ENST00000342415 MTHFSDQ2M296 383 aaKnown RBP14.77□□□□□ -0.04
SNRNP48-201ENST00000342415 TARBP1Q13395 1621 aaKnown RBP14.77□□□□□ -0.04
SNRNP48-201ENST00000342415 IGSF3O75054 1194 aa14.77□□□□□ -0.04
SNRNP48-201ENST00000342415 UGGT1Q9NYU2 1555 aa14.77□□□□□ -0.04
SNRNP48-201ENST00000342415 DNM1Q05193 864 aaKnown RBP14.77□□□□□ -0.05
SNRNP48-201ENST00000342415 MAP3K11Q16584 847 aa14.77□□□□□ -0.05
SNRNP48-201ENST00000342415 SYNE3Q6ZMZ3 975 aa14.77□□□□□ -0.05
SNRNP48-201ENST00000342415 MTERF4Q7Z6M4 381 aaKnown RBP14.77□□□□□ -0.05
SNRNP48-201ENST00000342415 TMEM63CQ9P1W3 806 aa14.77□□□□□ -0.05
SNRNP48-201ENST00000342415 GLRX3O76003 335 aaKnown RBP14.77□□□□□ -0.05
SNRNP48-201ENST00000342415 FAM173BQ6P4H8 233 aa14.77□□□□□ -0.05
SNRNP48-201ENST00000342415 RHPN1Q8TCX5 695 aa14.76□□□□□ -0.05
SNRNP48-201ENST00000342415 LMBRD1Q9NUN5 540 aa14.76□□□□□ -0.05
SNRNP48-201ENST00000342415 FSD2A1L4K1 749 aa14.76□□□□□ -0.05
SNRNP48-201ENST00000342415 PA2G4Q9UQ80 394 aaKnown RBP14.76□□□□□ -0.05
SNRNP48-201ENST00000342415 MSH6P52701 1360 aa14.75□□□□□ -0.05
SNRNP48-201ENST00000342415 GADD45BO75293 160 aaPredicted RBP14.75□□□□□ -0.05
SNRNP48-201ENST00000342415 LRRC2Q9BYS8 371 aa14.75□□□□□ -0.05
SNRNP48-201ENST00000342415 ERVK-7P63135 1459 aa14.75□□□□□ -0.05
SNRNP48-201ENST00000342415 OFD1O75665 1012 aa14.75□□□□□ -0.05
SNRNP48-201ENST00000342415 ZC3H6P61129 1189 aaKnown RBP14.75□□□□□ -0.05
SNRNP48-201ENST00000342415 PDCL2Q8N4E4 241 aa14.75□□□□□ -0.05
SNRNP48-201ENST00000342415 PLEKHF1Q96S99 279 aa14.75□□□□□ -0.05
SNRNP48-201ENST00000342415 PHAXQ9H814 394 aaKnown RBP14.75□□□□□ -0.05
SNRNP48-201ENST00000342415 TRMT1Q9NXH9 659 aaKnown RBP14.75□□□□□ -0.05
SNRNP48-201ENST00000342415 PDILTQ8N807 584 aa14.75□□□□□ -0.05
SNRNP48-201ENST00000342415 CCDC112Q8NEF3 446 aa14.75□□□□□ -0.05
SNRNP48-201ENST00000342415 DNAAF4Q8WXU2 420 aa14.75□□□□□ -0.05
SNRNP48-201ENST00000342415 PNMA6EA0A0J9YXQ4 647 aa14.74□□□□□ -0.05
SNRNP48-201ENST00000342415 PLEKHO1Q53GL0 409 aaPredicted RBP14.74□□□□□ -0.05
SNRNP48-201ENST00000342415 CEP170Q5SW79 1584 aa14.74□□□□□ -0.05
SNRNP48-201ENST00000342415 SIRT2Q8IXJ6 389 aa14.74□□□□□ -0.05
SNRNP48-201ENST00000342415 RASSF8Q8NHQ8 419 aa14.74□□□□□ -0.05
SNRNP48-201ENST00000342415 SYTL4Q96C24 671 aaPredicted RBP14.74□□□□□ -0.05
SNRNP48-201ENST00000342415 NFXL1Q6ZNB6 911 aa14.74□□□□□ -0.05
SNRNP48-201ENST00000342415 KDM5DQ9BY66 1539 aa14.74□□□□□ -0.05
SNRNP48-201ENST00000342415 RALYLQ86SE5 291 aaKnown RBP14.74□□□□□ -0.05
SNRNP48-201ENST00000342415 CHMLP26374 656 aa14.74□□□□□ -0.05
SNRNP48-201ENST00000342415 IL13P35225 146 aa14.74□□□□□ -0.05
SNRNP48-201ENST00000342415 MAPK8IP2Q13387 824 aaPredicted RBP14.73□□□□□ -0.05
SNRNP48-201ENST00000342415 TNNT3P45378 269 aaPredicted RBP14.73□□□□□ -0.05
SNRNP48-201ENST00000342415 FKBP4Q02790 459 aaKnown RBP eCLIP14.73□□□□□ -0.05
SNRNP48-201ENST00000342415 NOLC1Q14978 699 aaKnown RBP eCLIP14.73□□□□□ -0.05
SNRNP48-201ENST00000342415 STK38Q15208 465 aa14.73□□□□□ -0.05
SNRNP48-201ENST00000342415 TTLL5Q6EMB2 1281 aa14.73□□□□□ -0.05
SNRNP48-201ENST00000342415 PALD1Q9ULE6 856 aa14.73□□□□□ -0.05
SNRNP48-201ENST00000342415 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.73□□□□□ -0.05
SNRNP48-201ENST00000342415 PIP4K2AP48426 406 aaPredicted RBP14.73□□□□□ -0.05
SNRNP48-201ENST00000342415 AK2P54819 239 aa14.73□□□□□ -0.05
SNRNP48-201ENST00000342415 CCT2P78371 535 aaKnown RBP14.73□□□□□ -0.05
SNRNP48-201ENST00000342415 TRDNQ13061 729 aa14.73□□□□□ -0.05
SNRNP48-201ENST00000342415 ERBB4Q15303 1308 aa14.73□□□□□ -0.05
SNRNP48-201ENST00000342415 ZSCAN22P10073 491 aaPredicted RBP14.72□□□□□ -0.05
SNRNP48-201ENST00000342415 CHPF2Q9P2E5 772 aa14.72□□□□□ -0.05
SNRNP48-201ENST00000342415 RAB11FIP4Q86YS3 637 aa14.72□□□□□ -0.05
SNRNP48-201ENST00000342415 ADGBQ8N7X0 1667 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 143.4 ms