RNA–Protein interactions for RNA: ENST00000341398.6

NECTIN1-203, Transcript of nectin cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene NECTIN1, Length 1,377 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN1-203ENST00000341398 AMOTQ4VCS5 1084 aa17.86■□□□□ 0.45
NECTIN1-203ENST00000341398 KNSTRNQ9Y448 316 aa17.86■□□□□ 0.45
NECTIN1-203ENST00000341398 DCAF5Q96JK2 942 aa17.85■□□□□ 0.45
NECTIN1-203ENST00000341398 IGSF1Q8N6C5 1336 aa17.85■□□□□ 0.45
NECTIN1-203ENST00000341398 LINC00116Q8NCU8 138 aa17.84■□□□□ 0.45
NECTIN1-203ENST00000341398 GNPATO15228 680 aa17.83■□□□□ 0.45
NECTIN1-203ENST00000341398 ATG3Q9NT62 314 aa17.83■□□□□ 0.45
NECTIN1-203ENST00000341398 YBX3P16989 372 aaKnown RBP eCLIP17.82■□□□□ 0.44
NECTIN1-203ENST00000341398 CABP4P57796 275 aa17.81■□□□□ 0.44
NECTIN1-203ENST00000341398 C1orf141Q5JVX7 400 aa17.81■□□□□ 0.44
NECTIN1-203ENST00000341398 ZNF530Q6P9A1 599 aaPredicted RBP17.81■□□□□ 0.44
NECTIN1-203ENST00000341398 RBM42Q9BTD8 480 aaKnown RBP17.81■□□□□ 0.44
NECTIN1-203ENST00000341398 RTCBQ9Y3I0 505 aaKnown RBP17.81■□□□□ 0.44
NECTIN1-203ENST00000341398 GIGYF1O75420 1035 aaPredicted RBP17.8■□□□□ 0.44
NECTIN1-203ENST00000341398 MTHFSP49914 203 aa17.8■□□□□ 0.44
NECTIN1-203ENST00000341398 ITPK1Q13572 414 aa17.8■□□□□ 0.44
NECTIN1-203ENST00000341398 TRAPPC3LQ5T215 181 aa17.8■□□□□ 0.44
NECTIN1-203ENST00000341398 GOLGB1Q14789 3259 aaKnown RBP17.8■□□□□ 0.44
NECTIN1-203ENST00000341398 AMIGO3Q86WK7 504 aa17.79■□□□□ 0.44
NECTIN1-203ENST00000341398 RC3H1Q5TC82 1133 aaKnown RBP17.79■□□□□ 0.44
NECTIN1-203ENST00000341398 SMIM5Q71RC9 77 aa17.79■□□□□ 0.44
NECTIN1-203ENST00000341398 NLGN1Q8N2Q7 840 aa17.78■□□□□ 0.44
NECTIN1-203ENST00000341398 ADRA2BP18089 450 aa17.77■□□□□ 0.43
NECTIN1-203ENST00000341398 SULT6B1Q6IMI4 303 aa17.77■□□□□ 0.43
NECTIN1-203ENST00000341398 ZNF831Q5JPB2 1677 aa17.76■□□□□ 0.43
NECTIN1-203ENST00000341398 RFC4P35249 363 aa17.75■□□□□ 0.43
NECTIN1-203ENST00000341398 RPS6KA4O75676 772 aa17.74■□□□□ 0.43
NECTIN1-203ENST00000341398 MMP10P09238 476 aa17.74■□□□□ 0.43
NECTIN1-203ENST00000341398 AEBP1Q8IUX7 1158 aa17.74■□□□□ 0.43
NECTIN1-203ENST00000341398 NFATC2IPQ8NCF5 419 aa17.74■□□□□ 0.43
NECTIN1-203ENST00000341398 KDRP35968 1356 aa17.73■□□□□ 0.43
NECTIN1-203ENST00000341398 CNTNAP4Q9C0A0 1308 aa17.73■□□□□ 0.43
NECTIN1-203ENST00000341398 IL13P35225 146 aa17.73■□□□□ 0.43
NECTIN1-203ENST00000341398 ARHGEF1Q92888 912 aaKnown RBP17.73■□□□□ 0.43
NECTIN1-203ENST00000341398 PTCD1O75127 700 aaKnown RBP17.72■□□□□ 0.43
NECTIN1-203ENST00000341398 TGFB2P61812 414 aa17.72■□□□□ 0.43
NECTIN1-203ENST00000341398 SLC4A9Q96Q91 983 aa17.72■□□□□ 0.43
NECTIN1-203ENST00000341398 KDM6AO15550 1401 aaPredicted RBP17.71■□□□□ 0.43
NECTIN1-203ENST00000341398 AKAP4Q5JQC9 854 aa17.71■□□□□ 0.43
NECTIN1-203ENST00000341398 AMER1Q5JTC6 1135 aaPredicted RBP17.71■□□□□ 0.43
NECTIN1-203ENST00000341398 GPBP1L1Q9HC44 474 aaPredicted RBP17.71■□□□□ 0.43
NECTIN1-203ENST00000341398 CCDC87Q9NVE4 849 aa17.71■□□□□ 0.43
NECTIN1-203ENST00000341398 PARP3Q9Y6F1 533 aa17.71■□□□□ 0.43
NECTIN1-203ENST00000341398 COL5A3P25940 1745 aaPredicted RBP17.7■□□□□ 0.42
NECTIN1-203ENST00000341398 WWC3Q9ULE0 1092 aa17.69■□□□□ 0.42
NECTIN1-203ENST00000341398 SCN11AQ9UI33 1791 aa17.69■□□□□ 0.42
NECTIN1-203ENST00000341398 MYH14Q7Z406 1995 aaKnown RBP17.69■□□□□ 0.42
NECTIN1-203ENST00000341398 ATP10DQ9P241 1426 aa17.69■□□□□ 0.42
NECTIN1-203ENST00000341398 KIF7Q2M1P5 1343 aa17.69■□□□□ 0.42
NECTIN1-203ENST00000341398 GYS1P13807 737 aa17.67■□□□□ 0.42
NECTIN1-203ENST00000341398 CRKLP46109 303 aaKnown RBP17.67■□□□□ 0.42
NECTIN1-203ENST00000341398 KIF13BQ9NQT8 1826 aa17.67■□□□□ 0.42
NECTIN1-203ENST00000341398 DIAPH1O60610 1272 aaKnown RBP17.66■□□□□ 0.42
NECTIN1-203ENST00000341398 SLC52A2Q9HAB3 445 aa17.66■□□□□ 0.42
NECTIN1-203ENST00000341398 BCS1LQ9Y276 419 aa17.66■□□□□ 0.42
NECTIN1-203ENST00000341398 CICQ96RK0 1608 aaPredicted RBP17.65■□□□□ 0.42
NECTIN1-203ENST00000341398 A0A0G2JLW4 131 aa17.65■□□□□ 0.42
NECTIN1-203ENST00000341398 HMOX1P09601 288 aa17.65■□□□□ 0.42
NECTIN1-203ENST00000341398 CC2D1BQ5T0F9 858 aaKnown RBP17.65■□□□□ 0.42
NECTIN1-203ENST00000341398 N4BP2Q86UW6 1770 aaPredicted RBP17.64■□□□□ 0.42
NECTIN1-203ENST00000341398 PER1O15534 1290 aaPredicted RBP17.64■□□□□ 0.41
NECTIN1-203ENST00000341398 ZPR1O75312 459 aa17.64■□□□□ 0.41
NECTIN1-203ENST00000341398 ZNF526Q8TF50 670 aaPredicted RBP17.64■□□□□ 0.41
NECTIN1-203ENST00000341398 C4AP0C0L4 1744 aa17.63■□□□□ 0.41
NECTIN1-203ENST00000341398 VIRMAQ69YN4 1812 aaKnown RBP17.63■□□□□ 0.41
NECTIN1-203ENST00000341398 RNMTO43148 476 aaKnown RBP17.63■□□□□ 0.41
NECTIN1-203ENST00000341398 LGR6Q9HBX8 967 aa17.63■□□□□ 0.41
NECTIN1-203ENST00000341398 FCHSD2O94868 740 aa17.62■□□□□ 0.41
NECTIN1-203ENST00000341398 ARHGAP27Q6ZUM4 889 aa17.62■□□□□ 0.41
NECTIN1-203ENST00000341398 ADCY9O60503 1353 aa17.62■□□□□ 0.41
NECTIN1-203ENST00000341398 PXDNLA1KZ92 1463 aa17.62■□□□□ 0.41
NECTIN1-203ENST00000341398 C10orf71Q711Q0 1435 aa17.61■□□□□ 0.41
NECTIN1-203ENST00000341398 USP42Q9H9J4 1324 aaKnown RBP17.61■□□□□ 0.41
NECTIN1-203ENST00000341398 DPEP1P16444 411 aa17.61■□□□□ 0.41
NECTIN1-203ENST00000341398 INTS5Q6P9B9 1019 aaKnown RBP17.61■□□□□ 0.41
NECTIN1-203ENST00000341398 MTHFSDQ2M296 383 aaKnown RBP17.6■□□□□ 0.41
NECTIN1-203ENST00000341398 DNAJC10Q8IXB1 793 aa17.6■□□□□ 0.41
NECTIN1-203ENST00000341398 PIM2Q9P1W9 311 aa17.6■□□□□ 0.41
NECTIN1-203ENST00000341398 SRP68Q9UHB9 627 aaKnown RBP17.6■□□□□ 0.41
NECTIN1-203ENST00000341398 TJP1Q07157 1748 aa17.59■□□□□ 0.41
NECTIN1-203ENST00000341398 FKBP8Q14318 412 aa17.59■□□□□ 0.41
NECTIN1-203ENST00000341398 VSIG10Q8N0Z9 540 aa17.59■□□□□ 0.41
NECTIN1-203ENST00000341398 NPC1L1Q9UHC9 1359 aa17.58■□□□□ 0.41
NECTIN1-203ENST00000341398 U2SURPO15042 1029 aaKnown RBP17.58■□□□□ 0.4
NECTIN1-203ENST00000341398 SLC39A6Q13433 755 aa17.58■□□□□ 0.4
NECTIN1-203ENST00000341398 TTC5Q8N0Z6 440 aa17.58■□□□□ 0.4
NECTIN1-203ENST00000341398 KIAA1551Q9HCM1 1747 aa17.57■□□□□ 0.4
NECTIN1-203ENST00000341398 CYP19A1P11511 503 aaPredicted RBP17.57■□□□□ 0.4
NECTIN1-203ENST00000341398 CNGB1Q14028 1251 aaPredicted RBP17.57■□□□□ 0.4
NECTIN1-203ENST00000341398 STARD3NLO95772 234 aa17.56■□□□□ 0.4
NECTIN1-203ENST00000341398 TM4SF1P30408 202 aa17.56■□□□□ 0.4
NECTIN1-203ENST00000341398 TEFQ10587 303 aa17.56■□□□□ 0.4
NECTIN1-203ENST00000341398 DALRD3Q5D0E6 543 aaKnown RBP17.56■□□□□ 0.4
NECTIN1-203ENST00000341398 USPL1Q5W0Q7 1092 aa17.56■□□□□ 0.4
NECTIN1-203ENST00000341398 GAS2L2Q8NHY3 880 aa17.56■□□□□ 0.4
NECTIN1-203ENST00000341398 BRCA1P38398 1863 aaKnown RBP17.56■□□□□ 0.4
NECTIN1-203ENST00000341398 ARFGEF1Q9Y6D6 1849 aa17.56■□□□□ 0.4
NECTIN1-203ENST00000341398 GNAT3A8MTJ3 354 aa17.55■□□□□ 0.4
NECTIN1-203ENST00000341398 CFAP53Q96M91 514 aa17.55■□□□□ 0.4
NECTIN1-203ENST00000341398 NARFQ9UHQ1 456 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms