RNA–Protein interactions for RNA: ENST00000341316.6

SPG7-202, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 1 (best) BASIC

Gene SPG7, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-202ENST00000341316 CD2BP2O95400 341 aaKnown RBP24.91■■□□□ 1.58
SPG7-202ENST00000341316 ZBTB4Q9P1Z0 1013 aaPredicted RBP24.91■■□□□ 1.58
SPG7-202ENST00000341316 NCOA3Q9Y6Q9 1424 aa24.9■■□□□ 1.58
SPG7-202ENST00000341316 HDGFL1Q5TGJ6 251 aa24.9■■□□□ 1.58
SPG7-202ENST00000341316 RBM42Q9BTD8 480 aaKnown RBP24.9■■□□□ 1.58
SPG7-202ENST00000341316 SDSP20132 328 aa24.89■■□□□ 1.58
SPG7-202ENST00000341316 ARHGEF25Q86VW2 580 aa24.89■■□□□ 1.58
SPG7-202ENST00000341316 PHAXQ9H814 394 aaKnown RBP24.89■■□□□ 1.58
SPG7-202ENST00000341316 MED1Q15648 1581 aaPredicted RBP24.89■■□□□ 1.58
SPG7-202ENST00000341316 PHRF1Q9P1Y6 1649 aaKnown RBP24.89■■□□□ 1.58
SPG7-202ENST00000341316 CHMP5Q9NZZ3 219 aa24.88■■□□□ 1.57
SPG7-202ENST00000341316 PNMA6EA0A0J9YXQ4 647 aa24.88■■□□□ 1.57
SPG7-202ENST00000341316 KCNQ3O43525 872 aa24.88■■□□□ 1.57
SPG7-202ENST00000341316 EXOC6BQ9Y2D4 811 aa24.88■■□□□ 1.57
SPG7-202ENST00000341316 EIF4A1P60842 406 aaKnown RBP24.87■■□□□ 1.57
SPG7-202ENST00000341316 LMOD2Q6P5Q4 547 aa24.87■■□□□ 1.57
SPG7-202ENST00000341316 DDIT3P35638 169 aa24.87■■□□□ 1.57
SPG7-202ENST00000341316 SLIT3O75094 1523 aa24.86■■□□□ 1.57
SPG7-202ENST00000341316 GNAI3P08754 354 aa24.86■■□□□ 1.57
SPG7-202ENST00000341316 FAM43AQ8N2R8 423 aa24.86■■□□□ 1.57
SPG7-202ENST00000341316 MCM4P33991 863 aa24.86■■□□□ 1.57
SPG7-202ENST00000341316 ZNF530Q6P9A1 599 aaPredicted RBP24.86■■□□□ 1.57
SPG7-202ENST00000341316 L1TD1Q5T7N2 865 aaKnown RBP24.85■■□□□ 1.57
SPG7-202ENST00000341316 USP44Q9H0E7 712 aa24.85■■□□□ 1.57
SPG7-202ENST00000341316 EIF2S2P20042 333 aaKnown RBP24.84■■□□□ 1.57
SPG7-202ENST00000341316 MPRIPQ6WCQ1 1025 aa24.84■■□□□ 1.57
SPG7-202ENST00000341316 LRRFIP2Q9Y608 721 aaKnown RBP24.84■■□□□ 1.57
SPG7-202ENST00000341316 ATP8B2P98198 1209 aa24.84■■□□□ 1.57
SPG7-202ENST00000341316 AKAP4Q5JQC9 854 aa24.84■■□□□ 1.57
SPG7-202ENST00000341316 PROSER2Q86WR7 435 aaPredicted RBP24.84■■□□□ 1.57
SPG7-202ENST00000341316 AXIN2Q9Y2T1 843 aa24.84■■□□□ 1.57
SPG7-202ENST00000341316 PXDNQ92626 1479 aa24.83■■□□□ 1.57
SPG7-202ENST00000341316 ANKRD24Q8TF21 1146 aa24.83■■□□□ 1.57
SPG7-202ENST00000341316 PXDNLA1KZ92 1463 aa24.82■■□□□ 1.56
SPG7-202ENST00000341316 PDE1AP54750 535 aa24.82■■□□□ 1.56
SPG7-202ENST00000341316 KRT28Q7Z3Y7 464 aa24.82■■□□□ 1.56
SPG7-202ENST00000341316 USP26Q9BXU7 913 aa24.82■■□□□ 1.56
SPG7-202ENST00000341316 LMO7Q8WWI1 1683 aa24.82■■□□□ 1.56
SPG7-202ENST00000341316 NCAPD2Q15021 1401 aa24.82■■□□□ 1.56
SPG7-202ENST00000341316 HSP90AB1P08238 724 aaKnown RBP24.82■■□□□ 1.56
SPG7-202ENST00000341316 PLEKHO1Q53GL0 409 aaPredicted RBP24.82■■□□□ 1.56
SPG7-202ENST00000341316 OSBPL3Q9H4L5 887 aa24.82■■□□□ 1.56
SPG7-202ENST00000341316 CACNA1FO60840 1977 aa24.82■■□□□ 1.56
SPG7-202ENST00000341316 TRPM3Q9HCF6 1732 aaPredicted RBP24.81■■□□□ 1.56
SPG7-202ENST00000341316 CHPF2Q9P2E5 772 aa24.81■■□□□ 1.56
SPG7-202ENST00000341316 KDM3BQ7LBC6 1761 aa24.81■■□□□ 1.56
SPG7-202ENST00000341316 SALL3Q9BXA9 1300 aa24.81■■□□□ 1.56
SPG7-202ENST00000341316 N4BP2Q86UW6 1770 aaPredicted RBP24.81■■□□□ 1.56
SPG7-202ENST00000341316 TSHZ3Q63HK5 1081 aa24.81■■□□□ 1.56
SPG7-202ENST00000341316 BTBD11A6QL63 1104 aa24.8■■□□□ 1.56
SPG7-202ENST00000341316 C1orf167Q5SNV9 1468 aa24.8■■□□□ 1.56
SPG7-202ENST00000341316 TEFQ10587 303 aa24.79■■□□□ 1.56
SPG7-202ENST00000341316 ARXQ96QS3 562 aa24.78■■□□□ 1.56
SPG7-202ENST00000341316 LRRCC1Q9C099 1032 aa24.78■■□□□ 1.56
SPG7-202ENST00000341316 IBTKQ9P2D0 1353 aaPredicted RBP24.78■■□□□ 1.56
SPG7-202ENST00000341316 K7ELQ4 463 aaPredicted RBP24.78■■□□□ 1.56
SPG7-202ENST00000341316 RNMTO43148 476 aaKnown RBP24.78■■□□□ 1.56
SPG7-202ENST00000341316 ANXA1P04083 346 aa24.78■■□□□ 1.56
SPG7-202ENST00000341316 AMOTQ4VCS5 1084 aa24.78■■□□□ 1.56
SPG7-202ENST00000341316 HOXB7P09629 217 aa24.77■■□□□ 1.56
SPG7-202ENST00000341316 UBTFL1P0CB47 393 aaPredicted RBP24.77■■□□□ 1.56
SPG7-202ENST00000341316 GZF1Q9H116 711 aaPredicted RBP24.77■■□□□ 1.56
SPG7-202ENST00000341316 FOXD4L1Q9NU39 408 aa24.77■■□□□ 1.56
SPG7-202ENST00000341316 C19orf44Q9H6X5 657 aa24.76■■□□□ 1.55
SPG7-202ENST00000341316 SRCIN1Q9C0H9 1055 aa24.75■■□□□ 1.55
SPG7-202ENST00000341316 GOLGA6L3A6NEY3 463 aa24.74■■□□□ 1.55
SPG7-202ENST00000341316 C1orf141Q5JVX7 400 aa24.74■■□□□ 1.55
SPG7-202ENST00000341316 PI4KAP2A4QPH2 592 aa24.74■■□□□ 1.55
SPG7-202ENST00000341316 EIF5BO60841 1220 aaKnown RBP24.74■■□□□ 1.55
SPG7-202ENST00000341316 CASC1Q6TDU7 716 aa24.74■■□□□ 1.55
SPG7-202ENST00000341316 PI4KAP1Q8N8J0 262 aa24.74■■□□□ 1.55
SPG7-202ENST00000341316 DDX17Q92841 729 aaKnown RBP24.74■■□□□ 1.55
SPG7-202ENST00000341316 FSD2A1L4K1 749 aa24.73■■□□□ 1.55
SPG7-202ENST00000341316 TRAK2O60296 914 aa24.73■■□□□ 1.55
SPG7-202ENST00000341316 ZC3H6P61129 1189 aaKnown RBP24.73■■□□□ 1.55
SPG7-202ENST00000341316 BEND3Q5T5X7 828 aa24.73■■□□□ 1.55
SPG7-202ENST00000341316 NBPF7P0C2Y1 421 aaPredicted RBP24.73■■□□□ 1.55
SPG7-202ENST00000341316 XRCC6P12956 609 aaKnown RBP eCLIP24.73■■□□□ 1.55
SPG7-202ENST00000341316 SSH3Q8TE77 659 aa24.73■■□□□ 1.55
SPG7-202ENST00000341316 CAMTA1Q9Y6Y1 1673 aa24.72■■□□□ 1.55
SPG7-202ENST00000341316 MX1P20591 662 aa24.72■■□□□ 1.55
SPG7-202ENST00000341316 RABEP1Q15276 862 aa24.72■■□□□ 1.55
SPG7-202ENST00000341316 DNAAF4Q8WXU2 420 aa24.72■■□□□ 1.55
SPG7-202ENST00000341316 ADCY9O60503 1353 aa24.71■■□□□ 1.55
SPG7-202ENST00000341316 PRAMEF22A3QJZ6 481 aa24.71■■□□□ 1.55
SPG7-202ENST00000341316 PPP1R42Q7Z4L9 355 aa24.71■■□□□ 1.55
SPG7-202ENST00000341316 CIZ1Q9ULV3 898 aaPredicted RBP24.71■■□□□ 1.55
SPG7-202ENST00000341316 KIF1AQ12756 1690 aa24.7■■□□□ 1.55
SPG7-202ENST00000341316 TNPO1Q92973 898 aaKnown RBP24.7■■□□□ 1.55
SPG7-202ENST00000341316 ERBB3P21860 1342 aa24.7■■□□□ 1.54
SPG7-202ENST00000341316 ERC2O15083 957 aa24.7■■□□□ 1.54
SPG7-202ENST00000341316 RGPD5Q99666 1765 aa24.7■■□□□ 1.54
SPG7-202ENST00000341316 GIGYF1O75420 1035 aaPredicted RBP24.69■■□□□ 1.54
SPG7-202ENST00000341316 HSP90AA1P07900 732 aaKnown RBP24.69■■□□□ 1.54
SPG7-202ENST00000341316 POLA2Q14181 598 aa24.69■■□□□ 1.54
SPG7-202ENST00000341316 PROSER3Q2NL68 480 aa24.69■■□□□ 1.54
SPG7-202ENST00000341316 RRAGDQ9NQL2 400 aaPredicted RBP24.69■■□□□ 1.54
SPG7-202ENST00000341316 OVOS2A0A0G2JMS6 1433 aa24.69■■□□□ 1.54
SPG7-202ENST00000341316 MST1RQ04912 1400 aa24.69■■□□□ 1.54
SPG7-202ENST00000341316 TUBGCP6Q96RT7 1819 aa24.68■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms