RNA–Protein interactions for RNA: ENST00000341062.6

TRIM60-201, Transcript of tripartite motif containing 60, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TRIM60, Length 1,867 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM60-201ENST00000341062 MTHFSDQ2M296 383 aaKnown RBP17.01■□□□□ 0.31
TRIM60-201ENST00000341062 SPATA31A5Q5VU36 1347 aa17.01■□□□□ 0.31
TRIM60-201ENST00000341062 SPATA31A7Q8IWB4 1347 aa17.01■□□□□ 0.31
TRIM60-201ENST00000341062 ARHGAP45Q92619 1136 aa17■□□□□ 0.31
TRIM60-201ENST00000341062 CCDC9Q9Y3X0 531 aaKnown RBP17■□□□□ 0.31
TRIM60-201ENST00000341062 ITPRIPQ8IWB1 547 aa16.99■□□□□ 0.31
TRIM60-201ENST00000341062 ZBTB40Q9NUA8 1239 aa16.99■□□□□ 0.31
TRIM60-201ENST00000341062 VAMP4O75379 141 aa16.99■□□□□ 0.31
TRIM60-201ENST00000341062 TMEM57Q8N5G2 664 aa16.99■□□□□ 0.31
TRIM60-201ENST00000341062 CFAP44Q96MT7 982 aa16.99■□□□□ 0.31
TRIM60-201ENST00000341062 DISP2A7MBM2 1401 aa16.98■□□□□ 0.31
TRIM60-201ENST00000341062 VPS72Q15906 364 aa16.98■□□□□ 0.31
TRIM60-201ENST00000341062 ATRNO75882 1429 aa16.97■□□□□ 0.31
TRIM60-201ENST00000341062 NBR1Q14596 966 aa16.97■□□□□ 0.31
TRIM60-201ENST00000341062 FAM98CQ17RN3 349 aaKnown RBP16.97■□□□□ 0.31
TRIM60-201ENST00000341062 THUMPD2Q9BTF0 503 aaKnown RBP16.97■□□□□ 0.31
TRIM60-201ENST00000341062 MBIPQ9NS73 344 aa16.97■□□□□ 0.31
TRIM60-201ENST00000341062 PKD1L3Q7Z443 1732 aa16.97■□□□□ 0.31
TRIM60-201ENST00000341062 DCTN1Q14203 1278 aa16.97■□□□□ 0.31
TRIM60-201ENST00000341062 SMC5Q8IY18 1101 aa16.97■□□□□ 0.31
TRIM60-201ENST00000341062 PARP4Q9UKK3 1724 aaKnown RBP16.96■□□□□ 0.31
TRIM60-201ENST00000341062 MRPL50Q8N5N7 158 aaKnown RBP16.96■□□□□ 0.31
TRIM60-201ENST00000341062 CHMP4BQ9H444 224 aaKnown RBP16.96■□□□□ 0.31
TRIM60-201ENST00000341062 OVOS2A0A0G2JMS6 1433 aa16.96■□□□□ 0.31
TRIM60-201ENST00000341062 QTRT2Q9H974 415 aaKnown RBP16.95■□□□□ 0.3
TRIM60-201ENST00000341062 LAS1LQ9Y4W2 734 aaKnown RBP16.95■□□□□ 0.3
TRIM60-201ENST00000341062 RAPGEF4Q8WZA2 1011 aa16.95■□□□□ 0.3
TRIM60-201ENST00000341062 LRRC37A3O60309 1634 aa16.94■□□□□ 0.3
TRIM60-201ENST00000341062 IL2RBP14784 551 aa16.94■□□□□ 0.3
TRIM60-201ENST00000341062 CYP27B1O15528 508 aa16.93■□□□□ 0.3
TRIM60-201ENST00000341062 RTL5Q5HYW3 569 aaPredicted RBP16.93■□□□□ 0.3
TRIM60-201ENST00000341062 POTEAQ6S8J7 498 aa16.93■□□□□ 0.3
TRIM60-201ENST00000341062 ABCC4O15439 1325 aa16.93■□□□□ 0.3
TRIM60-201ENST00000341062 TATP17735 454 aaPredicted RBP16.93■□□□□ 0.3
TRIM60-201ENST00000341062 TWISTNBQ3B726 338 aaPredicted RBP16.93■□□□□ 0.3
TRIM60-201ENST00000341062 TSPYL6Q8N831 410 aa16.93■□□□□ 0.3
TRIM60-201ENST00000341062 GJD4Q96KN9 370 aaPredicted RBP16.93■□□□□ 0.3
TRIM60-201ENST00000341062 MCM10Q7L590 875 aa16.92■□□□□ 0.3
TRIM60-201ENST00000341062 DAXXQ9UER7 740 aaPredicted RBP16.92■□□□□ 0.3
TRIM60-201ENST00000341062 ZNF530Q6P9A1 599 aaPredicted RBP16.91■□□□□ 0.3
TRIM60-201ENST00000341062 LGR6Q9HBX8 967 aa16.91■□□□□ 0.3
TRIM60-201ENST00000341062 THSD7AQ9UPZ6 1657 aa16.91■□□□□ 0.3
TRIM60-201ENST00000341062 KAT6BQ8WYB5 2073 aa16.91■□□□□ 0.3
TRIM60-201ENST00000341062 BRWD3Q6RI45 1802 aa16.91■□□□□ 0.3
TRIM60-201ENST00000341062 SEC24BO95487 1268 aa16.9■□□□□ 0.3
TRIM60-201ENST00000341062 FAM182BQ5T319 152 aa16.9■□□□□ 0.3
TRIM60-201ENST00000341062 TRPC5Q9UL62 973 aaPredicted RBP16.9■□□□□ 0.3
TRIM60-201ENST00000341062 MPRIPQ6WCQ1 1025 aa16.9■□□□□ 0.3
TRIM60-201ENST00000341062 DDX54Q8TDD1 881 aaKnown RBP16.9■□□□□ 0.3
TRIM60-201ENST00000341062 TOGARAM1Q9Y4F4 1720 aa16.89■□□□□ 0.29
TRIM60-201ENST00000341062 ZBTB7BO15156 539 aaPredicted RBP16.89■□□□□ 0.29
TRIM60-201ENST00000341062 C8orf58Q8NAV2 365 aa16.89■□□□□ 0.29
TRIM60-201ENST00000341062 IL17REQ8NFR9 667 aa16.89■□□□□ 0.29
TRIM60-201ENST00000341062 ZCRB1Q8TBF4 217 aaKnown RBP16.89■□□□□ 0.29
TRIM60-201ENST00000341062 BARGINQ6ZT62 677 aa16.88■□□□□ 0.29
TRIM60-201ENST00000341062 KDM6AO15550 1401 aaPredicted RBP16.88■□□□□ 0.29
TRIM60-201ENST00000341062 CHL1O00533 1208 aa16.88■□□□□ 0.29
TRIM60-201ENST00000341062 PHKG2P15735 406 aa16.88■□□□□ 0.29
TRIM60-201ENST00000341062 PLEKHO1Q53GL0 409 aaPredicted RBP16.88■□□□□ 0.29
TRIM60-201ENST00000341062 API5Q9BZZ5 524 aaKnown RBP16.88■□□□□ 0.29
TRIM60-201ENST00000341062 UPF2Q9HAU5 1272 aaKnown RBP16.88■□□□□ 0.29
TRIM60-201ENST00000341062 NUCB1Q02818 461 aa16.87■□□□□ 0.29
TRIM60-201ENST00000341062 MAP3K5Q99683 1374 aa16.87■□□□□ 0.29
TRIM60-201ENST00000341062 DEKP35659 375 aaKnown RBP16.86■□□□□ 0.29
TRIM60-201ENST00000341062 MARCH10Q8NA82 808 aaPredicted RBP16.86■□□□□ 0.29
TRIM60-201ENST00000341062 TBC1D32Q96NH3 1257 aa16.86■□□□□ 0.29
TRIM60-201ENST00000341062 THRAP3Q9Y2W1 955 aaKnown RBP16.86■□□□□ 0.29
TRIM60-201ENST00000341062 SCN11AQ9UI33 1791 aa16.86■□□□□ 0.29
TRIM60-201ENST00000341062 TNS2Q63HR2 1409 aa16.86■□□□□ 0.29
TRIM60-201ENST00000341062 A0A0G2JS52 829 aa16.86■□□□□ 0.29
TRIM60-201ENST00000341062 GAS2L2Q8NHY3 880 aa16.86■□□□□ 0.29
TRIM60-201ENST00000341062 AMOTQ4VCS5 1084 aa16.85■□□□□ 0.29
TRIM60-201ENST00000341062 MIS18AQ9NYP9 233 aa16.85■□□□□ 0.29
TRIM60-201ENST00000341062 ADAMTS7Q9UKP4 1686 aa16.85■□□□□ 0.29
TRIM60-201ENST00000341062 GNAT3A8MTJ3 354 aa16.84■□□□□ 0.29
TRIM60-201ENST00000341062 SLC4A3P48751 1232 aa16.84■□□□□ 0.29
TRIM60-201ENST00000341062 DDB1Q16531 1140 aa16.84■□□□□ 0.29
TRIM60-201ENST00000341062 ZNF772Q68DY9 489 aaPredicted RBP16.84■□□□□ 0.29
TRIM60-201ENST00000341062 SEPT12Q8IYM1 358 aa16.84■□□□□ 0.29
TRIM60-201ENST00000341062 GCC1Q96CN9 775 aa16.84■□□□□ 0.29
TRIM60-201ENST00000341062 SPG7Q9UQ90 795 aa16.84■□□□□ 0.29
TRIM60-201ENST00000341062 ELL2O00472 640 aaPredicted RBP16.84■□□□□ 0.29
TRIM60-201ENST00000341062 ONECUT3O60422 494 aaPredicted RBP16.84■□□□□ 0.29
TRIM60-201ENST00000341062 AKAP4Q5JQC9 854 aa16.84■□□□□ 0.29
TRIM60-201ENST00000341062 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.84■□□□□ 0.29
TRIM60-201ENST00000341062 EXOC5O00471 708 aa16.83■□□□□ 0.28
TRIM60-201ENST00000341062 BECN1Q14457 450 aa16.83■□□□□ 0.28
TRIM60-201ENST00000341062 SIPA1L3O60292 1781 aaPredicted RBP16.83■□□□□ 0.28
TRIM60-201ENST00000341062 RNMTO43148 476 aaKnown RBP16.82■□□□□ 0.28
TRIM60-201ENST00000341062 PTF1AQ7RTS3 328 aa16.82■□□□□ 0.28
TRIM60-201ENST00000341062 IFNL2Q8IZJ0 200 aa16.82■□□□□ 0.28
TRIM60-201ENST00000341062 PCDH11XQ9BZA7 1347 aa16.82■□□□□ 0.28
TRIM60-201ENST00000341062 PCDH11YQ9BZA8 1340 aa16.82■□□□□ 0.28
TRIM60-201ENST00000341062 ITGB4P16144 1822 aa16.82■□□□□ 0.28
TRIM60-201ENST00000341062 DOT1LQ8TEK3 1739 aa16.82■□□□□ 0.28
TRIM60-201ENST00000341062 RGS12O14924 1447 aa16.82■□□□□ 0.28
TRIM60-201ENST00000341062 C1orf141Q5JVX7 400 aa16.82■□□□□ 0.28
TRIM60-201ENST00000341062 CHD1LQ86WJ1 897 aa16.82■□□□□ 0.28
TRIM60-201ENST00000341062 CACNA1FO60840 1977 aa16.81■□□□□ 0.28
TRIM60-201ENST00000341062 CEMIPQ8WUJ3 1361 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms