RNA–Protein interactions for RNA: ENST00000341060.3

TDP2-201, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TDP2, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-201ENST00000341060 APBB1O00213 710 aa17.96■□□□□ 0.47
TDP2-201ENST00000341060 CCDC30Q5VVM6 783 aa17.96■□□□□ 0.47
TDP2-201ENST00000341060 GNAI2P04899 355 aa17.96■□□□□ 0.47
TDP2-201ENST00000341060 FLIIQ13045 1269 aa17.96■□□□□ 0.47
TDP2-201ENST00000341060 BABAM1Q9NWV8 329 aa17.96■□□□□ 0.47
TDP2-201ENST00000341060 FAM43AQ8N2R8 423 aa17.95■□□□□ 0.46
TDP2-201ENST00000341060 LMTK3Q96Q04 1460 aa17.95■□□□□ 0.46
TDP2-201ENST00000341060 XRCC6P12956 609 aaKnown RBP eCLIP17.95■□□□□ 0.46
TDP2-201ENST00000341060 PTMSP20962 102 aa17.95■□□□□ 0.46
TDP2-201ENST00000341060 ABTB2Q8N961 1025 aa17.94■□□□□ 0.46
TDP2-201ENST00000341060 PHRF1Q9P1Y6 1649 aaKnown RBP17.94■□□□□ 0.46
TDP2-201ENST00000341060 REC8O95072 547 aa17.93■□□□□ 0.46
TDP2-201ENST00000341060 GNAI3P08754 354 aa17.93■□□□□ 0.46
TDP2-201ENST00000341060 FKBP5Q13451 457 aaPredicted RBP17.93■□□□□ 0.46
TDP2-201ENST00000341060 FOXD4L1Q9NU39 408 aa17.93■□□□□ 0.46
TDP2-201ENST00000341060 KDM3BQ7LBC6 1761 aa17.93■□□□□ 0.46
TDP2-201ENST00000341060 PDE1AP54750 535 aa17.93■□□□□ 0.46
TDP2-201ENST00000341060 NUTM2GQ5VZR2 741 aa17.93■□□□□ 0.46
TDP2-201ENST00000341060 CLEC17AQ6ZS10 378 aa17.93■□□□□ 0.46
TDP2-201ENST00000341060 IL17REQ8NFR9 667 aa17.93■□□□□ 0.46
TDP2-201ENST00000341060 ISY1Q9ULR0 285 aaKnown RBP17.93■□□□□ 0.46
TDP2-201ENST00000341060 MED1Q15648 1581 aaPredicted RBP17.93■□□□□ 0.46
TDP2-201ENST00000341060 SALL3Q9BXA9 1300 aa17.92■□□□□ 0.46
TDP2-201ENST00000341060 RGPD2P0DJD1 1756 aa17.92■□□□□ 0.46
TDP2-201ENST00000341060 NFAT5O94916 1531 aa17.92■□□□□ 0.46
TDP2-201ENST00000341060 SKOR2Q2VWA4 1001 aaPredicted RBP17.92■□□□□ 0.46
TDP2-201ENST00000341060 TAF7Q15545 349 aaPredicted RBP17.91■□□□□ 0.46
TDP2-201ENST00000341060 LMO7Q8WWI1 1683 aa17.91■□□□□ 0.46
TDP2-201ENST00000341060 ERC2O15083 957 aa17.9■□□□□ 0.46
TDP2-201ENST00000341060 MRE11P49959 708 aa17.9■□□□□ 0.46
TDP2-201ENST00000341060 EXOC6BQ9Y2D4 811 aa17.9■□□□□ 0.46
TDP2-201ENST00000341060 LRRCC1Q9C099 1032 aa17.9■□□□□ 0.46
TDP2-201ENST00000341060 CEMIPQ8WUJ3 1361 aa17.89■□□□□ 0.45
TDP2-201ENST00000341060 IBTKQ9P2D0 1353 aaPredicted RBP17.89■□□□□ 0.45
TDP2-201ENST00000341060 SSFA2P28290 1259 aa17.89■□□□□ 0.45
TDP2-201ENST00000341060 ARXQ96QS3 562 aa17.89■□□□□ 0.45
TDP2-201ENST00000341060 ST18O60284 1047 aa17.89■□□□□ 0.45
TDP2-201ENST00000341060 ATP8B2P98198 1209 aa17.89■□□□□ 0.45
TDP2-201ENST00000341060 PNMA6EA0A0J9YXQ4 647 aa17.88■□□□□ 0.45
TDP2-201ENST00000341060 LTV1Q96GA3 475 aaPredicted RBP17.88■□□□□ 0.45
TDP2-201ENST00000341060 C14orf37Q86TY3 774 aa17.87■□□□□ 0.45
TDP2-201ENST00000341060 NECTIN2Q92692 538 aa17.87■□□□□ 0.45
TDP2-201ENST00000341060 PHF8Q9UPP1 1060 aa17.87■□□□□ 0.45
TDP2-201ENST00000341060 PANK2Q9BZ23 570 aa17.87■□□□□ 0.45
TDP2-201ENST00000341060 GOLGA6L22H0YM25 854 aa17.86■□□□□ 0.45
TDP2-201ENST00000341060 MX1P20591 662 aa17.86■□□□□ 0.45
TDP2-201ENST00000341060 GRPEL1Q9HAV7 217 aa17.86■□□□□ 0.45
TDP2-201ENST00000341060 NUCB2P80303 420 aa17.86■□□□□ 0.45
TDP2-201ENST00000341060 HDGFL1Q5TGJ6 251 aa17.86■□□□□ 0.45
TDP2-201ENST00000341060 PROSER2Q86WR7 435 aaPredicted RBP17.86■□□□□ 0.45
TDP2-201ENST00000341060 IP6K1Q92551 441 aa17.86■□□□□ 0.45
TDP2-201ENST00000341060 LRRFIP2Q9Y608 721 aaKnown RBP17.86■□□□□ 0.45
TDP2-201ENST00000341060 CYP2E1P05181 493 aaPredicted RBP17.85■□□□□ 0.45
TDP2-201ENST00000341060 USHBP1Q8N6Y0 703 aa17.85■□□□□ 0.45
TDP2-201ENST00000341060 USP44Q9H0E7 712 aa17.85■□□□□ 0.45
TDP2-201ENST00000341060 BAG4O95429 457 aaKnown RBP17.84■□□□□ 0.45
TDP2-201ENST00000341060 CWC22Q9HCG8 908 aaKnown RBP17.84■□□□□ 0.45
TDP2-201ENST00000341060 SRCIN1Q9C0H9 1055 aa17.84■□□□□ 0.45
TDP2-201ENST00000341060 STAP2Q9UGK3 403 aa17.84■□□□□ 0.45
TDP2-201ENST00000341060 UBTFL1P0CB47 393 aaPredicted RBP17.83■□□□□ 0.45
TDP2-201ENST00000341060 STRCQ7RTU9 1775 aa17.83■□□□□ 0.44
TDP2-201ENST00000341060 ADGRL3Q9HAR2 1447 aa17.83■□□□□ 0.44
TDP2-201ENST00000341060 TSHZ3Q63HK5 1081 aa17.83■□□□□ 0.44
TDP2-201ENST00000341060 ESYT1Q9BSJ8 1104 aa17.83■□□□□ 0.44
TDP2-201ENST00000341060 AOX1Q06278 1338 aa17.82■□□□□ 0.44
TDP2-201ENST00000341060 HOXB7P09629 217 aa17.82■□□□□ 0.44
TDP2-201ENST00000341060 SSH3Q8TE77 659 aa17.82■□□□□ 0.44
TDP2-201ENST00000341060 PHAXQ9H814 394 aaKnown RBP17.82■□□□□ 0.44
TDP2-201ENST00000341060 KLHL40Q2TBA0 621 aa17.81■□□□□ 0.44
TDP2-201ENST00000341060 NBPF6Q5VWK0 638 aa17.81■□□□□ 0.44
TDP2-201ENST00000341060 NBPF4Q96M43 638 aa17.81■□□□□ 0.44
TDP2-201ENST00000341060 EIF4A1P60842 406 aaKnown RBP17.8■□□□□ 0.44
TDP2-201ENST00000341060 KCNH5Q8NCM2 988 aa17.8■□□□□ 0.44
TDP2-201ENST00000341060 CAMTA1Q9Y6Y1 1673 aa17.8■□□□□ 0.44
TDP2-201ENST00000341060 CHMLP26374 656 aa17.8■□□□□ 0.44
TDP2-201ENST00000341060 GAS2L3Q86XJ1 694 aa17.8■□□□□ 0.44
TDP2-201ENST00000341060 CHMP4AQ9BY43 222 aa17.8■□□□□ 0.44
TDP2-201ENST00000341060 SIPA1L3O60292 1781 aaPredicted RBP17.79■□□□□ 0.44
TDP2-201ENST00000341060 CRYBG1Q9Y4K1 1723 aa17.79■□□□□ 0.44
TDP2-201ENST00000341060 ANAPC15P60006 121 aa17.78■□□□□ 0.44
TDP2-201ENST00000341060 PKP1Q13835 747 aa17.78■□□□□ 0.44
TDP2-201ENST00000341060 ZGPATQ8N5A5 531 aaKnown RBP17.78■□□□□ 0.44
TDP2-201ENST00000341060 RRAGDQ9NQL2 400 aaPredicted RBP17.78■□□□□ 0.44
TDP2-201ENST00000341060 STRCP1A6NGW2 1772 aa17.78■□□□□ 0.44
TDP2-201ENST00000341060 NCAPD2Q15021 1401 aa17.78■□□□□ 0.44
TDP2-201ENST00000341060 SLIT3O75094 1523 aa17.78■□□□□ 0.44
TDP2-201ENST00000341060 TRIM6-TRIM34B2RNG4 842 aa17.78■□□□□ 0.44
TDP2-201ENST00000341060 POLA2Q14181 598 aa17.78■□□□□ 0.44
TDP2-201ENST00000341060 IL17RAQ96F46 866 aa17.78■□□□□ 0.44
TDP2-201ENST00000341060 LGR6Q9HBX8 967 aa17.78■□□□□ 0.44
TDP2-201ENST00000341060 DDX49Q9Y6V7 483 aaKnown RBP17.78■□□□□ 0.44
TDP2-201ENST00000341060 RAB11FIP3O75154 756 aa17.77■□□□□ 0.44
TDP2-201ENST00000341060 MCCP23508 829 aa17.77■□□□□ 0.44
TDP2-201ENST00000341060 MCM2P49736 904 aa17.77■□□□□ 0.44
TDP2-201ENST00000341060 RILPL2Q969X0 211 aa17.77■□□□□ 0.44
TDP2-201ENST00000341060 NEK4P51957 841 aa17.77■□□□□ 0.43
TDP2-201ENST00000341060 PSME1Q06323 249 aa17.77■□□□□ 0.43
TDP2-201ENST00000341060 AKAP4Q5JQC9 854 aa17.77■□□□□ 0.43
TDP2-201ENST00000341060 TMEM94Q12767 1356 aa17.76■□□□□ 0.43
TDP2-201ENST00000341060 OVOS2A0A0G2JMS6 1433 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms