RNA–Protein interactions for RNA: ENST00000340648.5

RRP1B-201, Transcript of ribosomal RNA processing 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RRP1B, Length 5,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP1B-201ENST00000340648 GNAT3A8MTJ3 354 aa17.52■□□□□ 0.39
RRP1B-201ENST00000340648 DHX16O60231 1041 aaKnown RBP17.52■□□□□ 0.39
RRP1B-201ENST00000340648 GJB2P29033 226 aa17.52■□□□□ 0.39
RRP1B-201ENST00000340648 TNNT1P13805 278 aa17.52■□□□□ 0.39
RRP1B-201ENST00000340648 PDE4CQ08493 712 aa17.52■□□□□ 0.39
RRP1B-201ENST00000340648 PTPN14Q15678 1187 aa17.52■□□□□ 0.39
RRP1B-201ENST00000340648 TSPYL6Q8N831 410 aa17.52■□□□□ 0.39
RRP1B-201ENST00000340648 SH2B1Q9NRF2 756 aaPredicted RBP17.52■□□□□ 0.39
RRP1B-201ENST00000340648 CLIP2Q9UDT6 1046 aa17.52■□□□□ 0.39
RRP1B-201ENST00000340648 SCAND2PQ9GZW5 306 aaPredicted RBP17.51■□□□□ 0.39
RRP1B-201ENST00000340648 MARCH6O60337 910 aa17.51■□□□□ 0.39
RRP1B-201ENST00000340648 RBM25P49756 843 aaKnown RBP17.51■□□□□ 0.39
RRP1B-201ENST00000340648 IDI1Q13907 227 aa17.51■□□□□ 0.39
RRP1B-201ENST00000340648 ANKRD44Q8N8A2 993 aa17.51■□□□□ 0.39
RRP1B-201ENST00000340648 UBE2HP62256 183 aa17.51■□□□□ 0.39
RRP1B-201ENST00000340648 FLIIQ13045 1269 aa17.51■□□□□ 0.39
RRP1B-201ENST00000340648 TFIP11Q9UBB9 837 aaKnown RBP17.51■□□□□ 0.39
RRP1B-201ENST00000340648 UVSSAQ2YD98 709 aa17.5■□□□□ 0.39
RRP1B-201ENST00000340648 USP48Q86UV5 1035 aa17.5■□□□□ 0.39
RRP1B-201ENST00000340648 MYL6BP14649 208 aa17.5■□□□□ 0.39
RRP1B-201ENST00000340648 PDE1AP54750 535 aa17.5■□□□□ 0.39
RRP1B-201ENST00000340648 BRPF1P55201 1214 aaPredicted RBP17.5■□□□□ 0.39
RRP1B-201ENST00000340648 CWC15Q9P013 229 aaKnown RBP17.5■□□□□ 0.39
RRP1B-201ENST00000340648 CNPY2Q9Y2B0 182 aa17.5■□□□□ 0.39
RRP1B-201ENST00000340648 ADGRL1O94910 1474 aa17.5■□□□□ 0.39
RRP1B-201ENST00000340648 NOLC1Q14978 699 aaKnown RBP eCLIP17.5■□□□□ 0.39
RRP1B-201ENST00000340648 PRIMPOLQ96LW4 560 aa17.5■□□□□ 0.39
RRP1B-201ENST00000340648 TTC12Q9H892 705 aaPredicted RBP17.5■□□□□ 0.39
RRP1B-201ENST00000340648 KRT32Q14532 448 aa17.49■□□□□ 0.39
RRP1B-201ENST00000340648 STK11IPQ8N1F8 1099 aa17.49■□□□□ 0.39
RRP1B-201ENST00000340648 MAGI3Q5TCQ9 1506 aa17.49■□□□□ 0.39
RRP1B-201ENST00000340648 GTF2E1P29083 439 aaPredicted RBP17.49■□□□□ 0.39
RRP1B-201ENST00000340648 NOM1Q5C9Z4 860 aaKnown RBP17.49■□□□□ 0.39
RRP1B-201ENST00000340648 BOLA2Q9H3K6 86 aa17.49■□□□□ 0.39
RRP1B-201ENST00000340648 GCC2Q8IWJ2 1684 aa17.49■□□□□ 0.39
RRP1B-201ENST00000340648 INSRP06213 1382 aa17.49■□□□□ 0.39
RRP1B-201ENST00000340648 KDM6BO15054 1643 aa17.49■□□□□ 0.39
RRP1B-201ENST00000340648 PDIA4P13667 645 aaKnown RBP17.49■□□□□ 0.39
RRP1B-201ENST00000340648 PLEKHM2Q8IWE5 1019 aa17.48■□□□□ 0.39
RRP1B-201ENST00000340648 BTBD11A6QL63 1104 aa17.48■□□□□ 0.39
RRP1B-201ENST00000340648 VAMP4O75379 141 aa17.48■□□□□ 0.39
RRP1B-201ENST00000340648 TAF7Q15545 349 aaPredicted RBP17.48■□□□□ 0.39
RRP1B-201ENST00000340648 ESYT1Q9BSJ8 1104 aa17.48■□□□□ 0.39
RRP1B-201ENST00000340648 TRMT1Q9NXH9 659 aaKnown RBP17.48■□□□□ 0.39
RRP1B-201ENST00000340648 PODXL2Q9NZ53 605 aa17.48■□□□□ 0.39
RRP1B-201ENST00000340648 DUOX2Q9NRD8 1548 aa17.48■□□□□ 0.39
RRP1B-201ENST00000340648 RBSNQ9H1K0 784 aa17.48■□□□□ 0.39
RRP1B-201ENST00000340648 ZSCAN22P10073 491 aaPredicted RBP17.47■□□□□ 0.39
RRP1B-201ENST00000340648 JMYQ8N9B5 988 aa17.47■□□□□ 0.39
RRP1B-201ENST00000340648 HS1BP3Q53T59 392 aa17.47■□□□□ 0.39
RRP1B-201ENST00000340648 SLC26A8Q96RN1 970 aa17.47■□□□□ 0.39
RRP1B-201ENST00000340648 DCTPP1Q9H773 170 aa17.46■□□□□ 0.39
RRP1B-201ENST00000340648 KIAA0556O60303 1618 aa17.46■□□□□ 0.39
RRP1B-201ENST00000340648 SHANK2Q9UPX8 1470 aa17.46■□□□□ 0.39
RRP1B-201ENST00000340648 CCDC8Q9H0W5 538 aaPredicted RBP17.46■□□□□ 0.39
RRP1B-201ENST00000340648 UBXN4Q92575 508 aa17.46■□□□□ 0.39
RRP1B-201ENST00000340648 CCDC47Q96A33 483 aaKnown RBP17.46■□□□□ 0.39
RRP1B-201ENST00000340648 RUFY1Q96T51 708 aa17.46■□□□□ 0.39
RRP1B-201ENST00000340648 KIF18AQ8NI77 898 aa17.45■□□□□ 0.38
RRP1B-201ENST00000340648 CAGE1Q8TC20 777 aa17.45■□□□□ 0.38
RRP1B-201ENST00000340648 USP26Q9BXU7 913 aa17.45■□□□□ 0.38
RRP1B-201ENST00000340648 DHX8Q14562 1220 aaKnown RBP17.45■□□□□ 0.38
RRP1B-201ENST00000340648 SFPQP23246 707 aaKnown RBP eCLIP17.45■□□□□ 0.38
RRP1B-201ENST00000340648 LEKR1Q6ZMV7 388 aa17.45■□□□□ 0.38
RRP1B-201ENST00000340648 ZBTB7BO15156 539 aaPredicted RBP17.44■□□□□ 0.38
RRP1B-201ENST00000340648 GUCY1B3Q02153 619 aa17.44■□□□□ 0.38
RRP1B-201ENST00000340648 AK7Q96M32 723 aa17.44■□□□□ 0.38
RRP1B-201ENST00000340648 DDX19AQ9NUU7 478 aaKnown RBP17.44■□□□□ 0.38
RRP1B-201ENST00000340648 WASLO00401 505 aaPredicted RBP17.44■□□□□ 0.38
RRP1B-201ENST00000340648 RRP12Q5JTH9 1297 aaKnown RBP17.44■□□□□ 0.38
RRP1B-201ENST00000340648 KDM5BQ9UGL1 1544 aa17.44■□□□□ 0.38
RRP1B-201ENST00000340648 ADGRL2O95490 1459 aa17.44■□□□□ 0.38
RRP1B-201ENST00000340648 ZNF165P49910 485 aa17.44■□□□□ 0.38
RRP1B-201ENST00000340648 SKIDA1Q1XH10 827 aa17.44■□□□□ 0.38
RRP1B-201ENST00000340648 FILIP1LQ4L180 1135 aa17.44■□□□□ 0.38
RRP1B-201ENST00000340648 PPP1R42Q7Z4L9 355 aa17.44■□□□□ 0.38
RRP1B-201ENST00000340648 ANO10Q9NW15 660 aa17.44■□□□□ 0.38
RRP1B-201ENST00000340648 CGNQ9P2M7 1197 aaKnown RBP17.44■□□□□ 0.38
RRP1B-201ENST00000340648 NPC1L1Q9UHC9 1359 aa17.44■□□□□ 0.38
RRP1B-201ENST00000340648 MAPK8IP2Q13387 824 aaPredicted RBP17.44■□□□□ 0.38
RRP1B-201ENST00000340648 ESCO1Q5FWF5 840 aa17.44■□□□□ 0.38
RRP1B-201ENST00000340648 TTC39AQ5SRH9 613 aa17.44■□□□□ 0.38
RRP1B-201ENST00000340648 CBFA2T2O43439 604 aa17.43■□□□□ 0.38
RRP1B-201ENST00000340648 NECAB1Q8N987 351 aa17.43■□□□□ 0.38
RRP1B-201ENST00000340648 NAP1L1P55209 391 aaKnown RBP17.43■□□□□ 0.38
RRP1B-201ENST00000340648 FKBP4Q02790 459 aaKnown RBP eCLIP17.43■□□□□ 0.38
RRP1B-201ENST00000340648 CFAP100Q494V2 611 aa17.43■□□□□ 0.38
RRP1B-201ENST00000340648 CEP85Q6P2H3 762 aa17.43■□□□□ 0.38
RRP1B-201ENST00000340648 USHBP1Q8N6Y0 703 aa17.43■□□□□ 0.38
RRP1B-201ENST00000340648 PHACTR3Q96KR7 559 aa17.43■□□□□ 0.38
RRP1B-201ENST00000340648 KRT24Q2M2I5 525 aa17.43■□□□□ 0.38
RRP1B-201ENST00000340648 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.43■□□□□ 0.387e-9■□□□□ 8.1
RRP1B-201ENST00000340648 CCDC158Q5M9N0 1113 aa17.42■□□□□ 0.38
RRP1B-201ENST00000340648 FBXO31Q5XUX0 539 aaPredicted RBP17.42■□□□□ 0.38
RRP1B-201ENST00000340648 DNAAF4Q8WXU2 420 aa17.42■□□□□ 0.38
RRP1B-201ENST00000340648 ERCC4Q92889 916 aaPredicted RBP17.42■□□□□ 0.38
RRP1B-201ENST00000340648 OTUD7AQ8TE49 926 aaPredicted RBP17.42■□□□□ 0.38
RRP1B-201ENST00000340648 VPS53Q5VIR6 699 aa17.42■□□□□ 0.38
RRP1B-201ENST00000340648 SMARCE1Q969G3 411 aa17.42■□□□□ 0.38
RRP1B-201ENST00000340648 SMTNL1A8MU46 457 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms