RNA–Protein interactions for RNA: ENST00000340473.7

GTF2F2-201, Transcript of general transcription factor IIF subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2F2, Length 2,239 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F2-201ENST00000340473 NFATC2IPQ8NCF5 419 aa17.29■□□□□ 0.36
GTF2F2-201ENST00000340473 BABAM1Q9NWV8 329 aa17.29■□□□□ 0.36
GTF2F2-201ENST00000340473 KDM3BQ7LBC6 1761 aa17.29■□□□□ 0.36
GTF2F2-201ENST00000340473 ONECUT3O60422 494 aaPredicted RBP17.29■□□□□ 0.36
GTF2F2-201ENST00000340473 RCAN3Q9UKA8 241 aa17.29■□□□□ 0.36
GTF2F2-201ENST00000340473 GTF3C3Q9Y5Q9 886 aa17.29■□□□□ 0.36
GTF2F2-201ENST00000340473 BTBD11A6QL63 1104 aa17.28■□□□□ 0.36
GTF2F2-201ENST00000340473 ERVV-2B6SEH9 535 aa17.28■□□□□ 0.36
GTF2F2-201ENST00000340473 CABP4P57796 275 aa17.28■□□□□ 0.36
GTF2F2-201ENST00000340473 TSPYL6Q8N831 410 aa17.28■□□□□ 0.36
GTF2F2-201ENST00000340473 KRT24Q2M2I5 525 aa17.27■□□□□ 0.36
GTF2F2-201ENST00000340473 C8orf58Q8NAV2 365 aa17.27■□□□□ 0.36
GTF2F2-201ENST00000340473 KCNQ3O43525 872 aa17.27■□□□□ 0.35
GTF2F2-201ENST00000340473 SUPT16HQ9Y5B9 1047 aaKnown RBP17.27■□□□□ 0.35
GTF2F2-201ENST00000340473 RGS17Q9UGC6 210 aaPredicted RBP17.26■□□□□ 0.35
GTF2F2-201ENST00000340473 ELL2O00472 640 aaPredicted RBP17.25■□□□□ 0.35
GTF2F2-201ENST00000340473 SEPT12Q8IYM1 358 aa17.25■□□□□ 0.35
GTF2F2-201ENST00000340473 DOT1LQ8TEK3 1739 aa17.25■□□□□ 0.35
GTF2F2-201ENST00000340473 CT47B1P0C2W7 299 aaPredicted RBP17.24■□□□□ 0.35
GTF2F2-201ENST00000340473 SLC39A6Q13433 755 aa17.24■□□□□ 0.35
GTF2F2-201ENST00000340473 ITGB4P16144 1822 aa17.24■□□□□ 0.35
GTF2F2-201ENST00000340473 VAMP4O75379 141 aa17.24■□□□□ 0.35
GTF2F2-201ENST00000340473 RBM6P78332 1123 aaKnown RBP17.24■□□□□ 0.35
GTF2F2-201ENST00000340473 TWISTNBQ3B726 338 aaPredicted RBP17.24■□□□□ 0.35
GTF2F2-201ENST00000340473 EIF4A1P60842 406 aaKnown RBP17.23■□□□□ 0.35
GTF2F2-201ENST00000340473 ILDR1Q86SU0 546 aaPredicted RBP17.23■□□□□ 0.35
GTF2F2-201ENST00000340473 RARSP54136 660 aaKnown RBP17.23■□□□□ 0.35
GTF2F2-201ENST00000340473 ZNF790Q6PG37 636 aa17.22■□□□□ 0.35
GTF2F2-201ENST00000340473 TMOD3Q9NYL9 352 aa17.22■□□□□ 0.35
GTF2F2-201ENST00000340473 BCAR3O75815 825 aa17.21■□□□□ 0.35
GTF2F2-201ENST00000340473 PIGBQ92521 554 aa17.21■□□□□ 0.35
GTF2F2-201ENST00000340473 PAPPAQ13219 1627 aa17.21■□□□□ 0.35
GTF2F2-201ENST00000340473 PRIM1P49642 420 aaKnown RBP17.21■□□□□ 0.35
GTF2F2-201ENST00000340473 ACSBG1Q96GR2 724 aa17.21■□□□□ 0.35
GTF2F2-201ENST00000340473 FAM182BQ5T319 152 aa17.2■□□□□ 0.34
GTF2F2-201ENST00000340473 BCL2L13Q9BXK5 485 aa17.2■□□□□ 0.34
GTF2F2-201ENST00000340473 BCL9O00512 1426 aa17.2■□□□□ 0.34
GTF2F2-201ENST00000340473 BRWD3Q6RI45 1802 aa17.2■□□□□ 0.34
GTF2F2-201ENST00000340473 RNF123Q5XPI4 1314 aa17.2■□□□□ 0.34
GTF2F2-201ENST00000340473 KAT6BQ8WYB5 2073 aa17.2■□□□□ 0.34
GTF2F2-201ENST00000340473 POTEAQ6S8J7 498 aa17.2■□□□□ 0.34
GTF2F2-201ENST00000340473 SYTL4Q96C24 671 aaPredicted RBP17.2■□□□□ 0.34
GTF2F2-201ENST00000340473 HEG1Q9ULI3 1381 aa17.19■□□□□ 0.34
GTF2F2-201ENST00000340473 RXRBP28702 533 aa17.19■□□□□ 0.34
GTF2F2-201ENST00000340473 TTC5Q8N0Z6 440 aa17.19■□□□□ 0.34
GTF2F2-201ENST00000340473 SSH1Q8WYL5 1049 aa17.19■□□□□ 0.34
GTF2F2-201ENST00000340473 UBR2Q8IWV8 1755 aa17.18■□□□□ 0.34
GTF2F2-201ENST00000340473 ZNF496Q96IT1 587 aaPredicted RBP17.18■□□□□ 0.34
GTF2F2-201ENST00000340473 RRP1P56182 461 aaKnown RBP17.17■□□□□ 0.34
GTF2F2-201ENST00000340473 ZNF428Q96B54 188 aa17.17■□□□□ 0.34
GTF2F2-201ENST00000340473 KCPQ6ZWJ8 1503 aa17.17■□□□□ 0.34
GTF2F2-201ENST00000340473 TCERG1O14776 1098 aaKnown RBP17.17■□□□□ 0.34
GTF2F2-201ENST00000340473 KCNQ2O43526 872 aa17.17■□□□□ 0.34
GTF2F2-201ENST00000340473 ASAP1Q9ULH1 1129 aa17.17■□□□□ 0.34
GTF2F2-201ENST00000340473 PRAMEF22A3QJZ6 481 aa17.16■□□□□ 0.34
GTF2F2-201ENST00000340473 PLIN1O60240 522 aa17.16■□□□□ 0.34
GTF2F2-201ENST00000340473 GIGYF1O75420 1035 aaPredicted RBP17.16■□□□□ 0.34
GTF2F2-201ENST00000340473 ALDH1L2Q3SY69 923 aa17.16■□□□□ 0.34
GTF2F2-201ENST00000340473 SMC4Q9NTJ3 1288 aa17.16■□□□□ 0.34
GTF2F2-201ENST00000340473 ATG3Q9NT62 314 aa17.16■□□□□ 0.34
GTF2F2-201ENST00000340473 C5P01031 1676 aa17.15■□□□□ 0.34
GTF2F2-201ENST00000340473 KRT27Q7Z3Y8 459 aa17.15■□□□□ 0.34
GTF2F2-201ENST00000340473 FMNL2Q96PY5 1086 aa17.15■□□□□ 0.34
GTF2F2-201ENST00000340473 RGS12O14924 1447 aa17.15■□□□□ 0.34
GTF2F2-201ENST00000340473 SOS1Q07889 1333 aaPredicted RBP17.15■□□□□ 0.34
GTF2F2-201ENST00000340473 HOXB7P09629 217 aa17.15■□□□□ 0.34
GTF2F2-201ENST00000340473 NECTIN2Q92692 538 aa17.14■□□□□ 0.33
GTF2F2-201ENST00000340473 PTCD1O75127 700 aaKnown RBP17.13■□□□□ 0.33
GTF2F2-201ENST00000340473 PTF1AQ7RTS3 328 aa17.13■□□□□ 0.33
GTF2F2-201ENST00000340473 MRPL50Q8N5N7 158 aaKnown RBP17.13■□□□□ 0.33
GTF2F2-201ENST00000340473 NHSQ6T4R5 1651 aa17.13■□□□□ 0.33
GTF2F2-201ENST00000340473 IRX6P78412 446 aaPredicted RBP17.13■□□□□ 0.33
GTF2F2-201ENST00000340473 SBF2Q86WG5 1849 aa17.13■□□□□ 0.33
GTF2F2-201ENST00000340473 EIF2S2P20042 333 aaKnown RBP17.12■□□□□ 0.33
GTF2F2-201ENST00000340473 HDGFL1Q5TGJ6 251 aa17.12■□□□□ 0.33
GTF2F2-201ENST00000340473 FRAT1Q92837 279 aaPredicted RBP17.12■□□□□ 0.33
GTF2F2-201ENST00000340473 SNRPA1P09661 255 aaKnown RBP17.12■□□□□ 0.33
GTF2F2-201ENST00000340473 BRPF1P55201 1214 aaPredicted RBP17.11■□□□□ 0.33
GTF2F2-201ENST00000340473 CCDC30Q5VVM6 783 aa17.11■□□□□ 0.33
GTF2F2-201ENST00000340473 NOB1Q9ULX3 412 aaKnown RBP17.1■□□□□ 0.33
GTF2F2-201ENST00000340473 USP16Q9Y5T5 823 aa17.1■□□□□ 0.33
GTF2F2-201ENST00000340473 EP400Q96L91 3159 aa17.1■□□□□ 0.33
GTF2F2-201ENST00000340473 SLC4A2P04920 1241 aa17.09■□□□□ 0.33
GTF2F2-201ENST00000340473 C20orf194Q5TEA3 1177 aa17.09■□□□□ 0.33
GTF2F2-201ENST00000340473 FAM196AQ6ZSG2 479 aa17.09■□□□□ 0.33
GTF2F2-201ENST00000340473 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.09■□□□□ 0.33
GTF2F2-201ENST00000340473 RBM42Q9BTD8 480 aaKnown RBP17.09■□□□□ 0.33
GTF2F2-201ENST00000340473 BTAF1O14981 1849 aa17.09■□□□□ 0.33
GTF2F2-201ENST00000340473 LAMB4A4D0S4 1761 aa17.09■□□□□ 0.33
GTF2F2-201ENST00000340473 CANXP27824 592 aaKnown RBP17.09■□□□□ 0.33
GTF2F2-201ENST00000340473 STK31Q9BXU1 1019 aa17.09■□□□□ 0.33
GTF2F2-201ENST00000340473 KIF16BQ96L93 1317 aa17.08■□□□□ 0.33
GTF2F2-201ENST00000340473 NEFLP07196 543 aa17.08■□□□□ 0.33
GTF2F2-201ENST00000340473 SLC4A9Q96Q91 983 aa17.08■□□□□ 0.33
GTF2F2-201ENST00000340473 CHPF2Q9P2E5 772 aa17.08■□□□□ 0.33
GTF2F2-201ENST00000340473 TNNQ9UQP3 1299 aa17.08■□□□□ 0.33
GTF2F2-201ENST00000340473 PALLDQ8WX93 1383 aa17.08■□□□□ 0.32
GTF2F2-201ENST00000340473 VSIG10Q8N0Z9 540 aa17.07■□□□□ 0.32
GTF2F2-201ENST00000340473 FKBP8Q14318 412 aa17.06■□□□□ 0.32
GTF2F2-201ENST00000340473 ZKSCAN2Q63HK3 967 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms