RNA–Protein interactions for RNA: ENST00000339861.8

SEMA4D-201, Transcript of semaphorin 4D, humanhuman

TSL 5 BASIC

Gene SEMA4D, Length 4,258 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-201ENST00000339861 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.32□□□□□ -0.28
SEMA4D-201ENST00000339861 WDR33Q9C0J8 1336 aaKnown RBP13.32□□□□□ -0.28
SEMA4D-201ENST00000339861 CSPP1Q1MSJ5 1256 aa13.31□□□□□ -0.28
SEMA4D-201ENST00000339861 EYA1Q99502 592 aa13.31□□□□□ -0.28
SEMA4D-201ENST00000339861 ESYT1Q9BSJ8 1104 aa13.31□□□□□ -0.28
SEMA4D-201ENST00000339861 BOLA2Q9H3K6 86 aa13.31□□□□□ -0.28
SEMA4D-201ENST00000339861 YEATS2Q9ULM3 1422 aa13.31□□□□□ -0.28
SEMA4D-201ENST00000339861 RIMS2Q9UQ26 1411 aa13.31□□□□□ -0.28
SEMA4D-201ENST00000339861 UQCRHLA0A096LP55 91 aa13.31□□□□□ -0.28
SEMA4D-201ENST00000339861 UQCRHP07919 91 aa13.31□□□□□ -0.28
SEMA4D-201ENST00000339861 MAP3K19Q56UN5 1328 aa13.3□□□□□ -0.28
SEMA4D-201ENST00000339861 RBSNQ9H1K0 784 aa13.3□□□□□ -0.28
SEMA4D-201ENST00000339861 PLXNC1O60486 1568 aa13.3□□□□□ -0.28
SEMA4D-201ENST00000339861 HSP90AB4PQ58FF6 505 aa13.3□□□□□ -0.28
SEMA4D-201ENST00000339861 POGZQ7Z3K3 1410 aa13.3□□□□□ -0.28
SEMA4D-201ENST00000339861 ZC3H6P61129 1189 aaKnown RBP13.3□□□□□ -0.28
SEMA4D-201ENST00000339861 GNL2Q13823 731 aaKnown RBP13.3□□□□□ -0.28
SEMA4D-201ENST00000339861 LARP1BQ659C4 914 aaKnown RBP13.29□□□□□ -0.28
SEMA4D-201ENST00000339861 NECAB1Q8N987 351 aa13.29□□□□□ -0.28
SEMA4D-201ENST00000339861 PDRG1Q9NUG6 133 aa13.29□□□□□ -0.28
SEMA4D-201ENST00000339861 CYP46A1Q9Y6A2 500 aa13.29□□□□□ -0.28
SEMA4D-201ENST00000339861 MYOM2P54296 1465 aa13.29□□□□□ -0.28
SEMA4D-201ENST00000339861 TAF7LQ5H9L4 462 aa13.29□□□□□ -0.28
SEMA4D-201ENST00000339861 PA2G4Q9UQ80 394 aaKnown RBP13.29□□□□□ -0.28
SEMA4D-201ENST00000339861 SF3A1Q15459 793 aaKnown RBP13.29□□□□□ -0.28
SEMA4D-201ENST00000339861 TTC5Q8N0Z6 440 aa13.29□□□□□ -0.28
SEMA4D-201ENST00000339861 DDX11Q96FC9 970 aa13.29□□□□□ -0.28
SEMA4D-201ENST00000339861 ABCC4O15439 1325 aa13.28□□□□□ -0.28
SEMA4D-201ENST00000339861 DDX58O95786 925 aaKnown RBP13.28□□□□□ -0.28
SEMA4D-201ENST00000339861 PIP4K2AP48426 406 aaPredicted RBP13.28□□□□□ -0.28
SEMA4D-201ENST00000339861 CHMP4AQ9BY43 222 aa13.28□□□□□ -0.28
SEMA4D-201ENST00000339861 CHPF2Q9P2E5 772 aa13.28□□□□□ -0.28
SEMA4D-201ENST00000339861 HDAC5Q9UQL6 1122 aa13.28□□□□□ -0.28
SEMA4D-201ENST00000339861 CHL1O00533 1208 aa13.28□□□□□ -0.28
SEMA4D-201ENST00000339861 HCLS1P14317 486 aaPredicted RBP13.28□□□□□ -0.28
SEMA4D-201ENST00000339861 KIF1BPQ96EK5 621 aa13.28□□□□□ -0.28
SEMA4D-201ENST00000339861 GOLGA6L6A8MZA4 724 aa13.28□□□□□ -0.28
SEMA4D-201ENST00000339861 CNPY2Q9Y2B0 182 aa13.28□□□□□ -0.28
SEMA4D-201ENST00000339861 MAP3K4Q9Y6R4 1608 aa13.28□□□□□ -0.28
SEMA4D-201ENST00000339861 BECN2A8MW95 431 aa13.27□□□□□ -0.28
SEMA4D-201ENST00000339861 RHPN1Q8TCX5 695 aa13.27□□□□□ -0.28
SEMA4D-201ENST00000339861 TFIP11Q9UBB9 837 aaKnown RBP13.27□□□□□ -0.28
SEMA4D-201ENST00000339861 PALD1Q9ULE6 856 aa13.27□□□□□ -0.28
SEMA4D-201ENST00000339861 RNF20Q5VTR2 975 aa13.27□□□□□ -0.28
SEMA4D-201ENST00000339861 RAPGEF4Q8WZA2 1011 aa13.27□□□□□ -0.28
SEMA4D-201ENST00000339861 DNAAF4Q8WXU2 420 aa13.27□□□□□ -0.29
SEMA4D-201ENST00000339861 FSD2A1L4K1 749 aa13.27□□□□□ -0.29
SEMA4D-201ENST00000339861 GOLGA6L19H0YKK7 550 aa13.27□□□□□ -0.29
SEMA4D-201ENST00000339861 TPM2P07951 284 aa13.27□□□□□ -0.29
SEMA4D-201ENST00000339861 GIMAP6Q6P9H5 292 aa13.27□□□□□ -0.29
SEMA4D-201ENST00000339861 PLEKHO1Q53GL0 409 aaPredicted RBP13.26□□□□□ -0.29
SEMA4D-201ENST00000339861 USP48Q86UV5 1035 aa13.26□□□□□ -0.29
SEMA4D-201ENST00000339861 LRRC59Q96AG4 307 aaKnown RBP13.26□□□□□ -0.29
SEMA4D-201ENST00000339861 CCDC85AQ96PX6 553 aaPredicted RBP13.26□□□□□ -0.29
SEMA4D-201ENST00000339861 ABCA6Q8N139 1617 aa13.26□□□□□ -0.29
SEMA4D-201ENST00000339861 CHMLP26374 656 aa13.26□□□□□ -0.29
SEMA4D-201ENST00000339861 CKAP2LQ8IYA6 745 aa13.26□□□□□ -0.29
SEMA4D-201ENST00000339861 TRIM5Q9C035 493 aa13.26□□□□□ -0.29
SEMA4D-201ENST00000339861 ZFYVE9O95405 1425 aa13.26□□□□□ -0.29
SEMA4D-201ENST00000339861 KIF1BO60333 1816 aa13.26□□□□□ -0.29
SEMA4D-201ENST00000339861 SPHKAPQ2M3C7 1700 aa13.26□□□□□ -0.29
SEMA4D-201ENST00000339861 ATP8B2P98198 1209 aa13.25□□□□□ -0.29
SEMA4D-201ENST00000339861 TOMM22Q9NS69 142 aa13.25□□□□□ -0.29
SEMA4D-201ENST00000339861 LMBRD1Q9NUN5 540 aa13.25□□□□□ -0.29
SEMA4D-201ENST00000339861 RAB11FIP3O75154 756 aa13.25□□□□□ -0.29
SEMA4D-201ENST00000339861 FMNL2Q96PY5 1086 aa13.25□□□□□ -0.29
SEMA4D-201ENST00000339861 TMEM63CQ9P1W3 806 aa13.25□□□□□ -0.29
SEMA4D-201ENST00000339861 SASS6Q6UVJ0 657 aa13.24□□□□□ -0.29
SEMA4D-201ENST00000339861 LRSAM1Q6UWE0 723 aa13.24□□□□□ -0.29
SEMA4D-201ENST00000339861 MAP3K2Q9Y2U5 619 aa13.24□□□□□ -0.29
SEMA4D-201ENST00000339861 TET3O43151 1660 aa13.24□□□□□ -0.29
SEMA4D-201ENST00000339861 HTATSF1O43719 755 aaKnown RBP13.24□□□□□ -0.29
SEMA4D-201ENST00000339861 BLOC1S2Q6QNY1 142 aa13.24□□□□□ -0.29
SEMA4D-201ENST00000339861 TTC12Q9H892 705 aaPredicted RBP13.24□□□□□ -0.29
SEMA4D-201ENST00000339861 GADD45BO75293 160 aaPredicted RBP13.24□□□□□ -0.29
SEMA4D-201ENST00000339861 CWF19L2Q2TBE0 894 aaKnown RBP13.24□□□□□ -0.29
SEMA4D-201ENST00000339861 UNC5CLQ8IV45 518 aa13.24□□□□□ -0.29
SEMA4D-201ENST00000339861 FAM177BA6PVY3 158 aa13.23□□□□□ -0.29
SEMA4D-201ENST00000339861 STX6O43752 255 aa13.23□□□□□ -0.29
SEMA4D-201ENST00000339861 GLRX3O76003 335 aaKnown RBP13.23□□□□□ -0.29
SEMA4D-201ENST00000339861 GJB2P29033 226 aa13.23□□□□□ -0.29
SEMA4D-201ENST00000339861 LIMCH1Q9UPQ0 1083 aa13.23□□□□□ -0.29
SEMA4D-201ENST00000339861 RTL1A6NKG5 1358 aa13.23□□□□□ -0.29
SEMA4D-201ENST00000339861 METP08581 1390 aa13.23□□□□□ -0.29
SEMA4D-201ENST00000339861 FAM173BQ6P4H8 233 aa13.23□□□□□ -0.29
SEMA4D-201ENST00000339861 STK11IPQ8N1F8 1099 aa13.23□□□□□ -0.29
SEMA4D-201ENST00000339861 PRDM10Q9NQV6 1147 aa13.23□□□□□ -0.29
SEMA4D-201ENST00000339861 ERBB4Q15303 1308 aa13.22□□□□□ -0.29
SEMA4D-201ENST00000339861 NPHP1O15259 732 aa13.22□□□□□ -0.29
SEMA4D-201ENST00000339861 RRP9O43818 475 aaKnown RBP13.22□□□□□ -0.29
SEMA4D-201ENST00000339861 NBPF7P0C2Y1 421 aaPredicted RBP13.22□□□□□ -0.29
SEMA4D-201ENST00000339861 SLC39A6Q13433 755 aa13.22□□□□□ -0.29
SEMA4D-201ENST00000339861 KIF2CQ99661 725 aa13.22□□□□□ -0.29
SEMA4D-201ENST00000339861 LRRC2Q9BYS8 371 aa13.22□□□□□ -0.29
SEMA4D-201ENST00000339861 WASHC4Q2M389 1173 aa13.22□□□□□ -0.29
SEMA4D-201ENST00000339861 THEMISQ8N1K5 641 aaPredicted RBP13.22□□□□□ -0.29
SEMA4D-201ENST00000339861 C17orf53Q8N3J3 647 aaPredicted RBP13.22□□□□□ -0.29
SEMA4D-201ENST00000339861 EFCAB6Q5THR3 1501 aa13.22□□□□□ -0.29
SEMA4D-201ENST00000339861 ADCY5O95622 1261 aa13.22□□□□□ -0.29
SEMA4D-201ENST00000339861 APPP05067 770 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms