RNA–Protein interactions for RNA: ENST00000339430.9

LITAF-201, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-201ENST00000339430 CERKQ8TCT0 537 aa20.38■□□□□ 0.85
LITAF-201ENST00000339430 NLRP2Q9NX02 1062 aa20.38■□□□□ 0.85
LITAF-201ENST00000339430 MIS18AQ9NYP9 233 aa20.38■□□□□ 0.85
LITAF-201ENST00000339430 ABCC6O95255 1503 aa20.38■□□□□ 0.85
LITAF-201ENST00000339430 CHL1O00533 1208 aa20.37■□□□□ 0.85
LITAF-201ENST00000339430 IL27Q8NEV9 243 aa20.37■□□□□ 0.85
LITAF-201ENST00000339430 COL16A1Q07092 1604 aaPredicted RBP20.37■□□□□ 0.85
LITAF-201ENST00000339430 BMP2KLQ5H9B9 411 aa20.36■□□□□ 0.85
LITAF-201ENST00000339430 GAS2L2Q8NHY3 880 aa20.36■□□□□ 0.85
LITAF-201ENST00000339430 NCAPD2Q15021 1401 aa20.35■□□□□ 0.85
LITAF-201ENST00000339430 CAMTA1Q9Y6Y1 1673 aa20.35■□□□□ 0.85
LITAF-201ENST00000339430 COL22A1Q8NFW1 1626 aaPredicted RBP20.34■□□□□ 0.85
LITAF-201ENST00000339430 LMO7Q8WWI1 1683 aa20.33■□□□□ 0.85
LITAF-201ENST00000339430 INTS3Q68E01 1043 aaKnown RBP20.32■□□□□ 0.84
LITAF-201ENST00000339430 RTF1Q92541 710 aaKnown RBP20.32■□□□□ 0.84
LITAF-201ENST00000339430 RGS12O14924 1447 aa20.32■□□□□ 0.84
LITAF-201ENST00000339430 HSCBQ8IWL3 235 aa20.31■□□□□ 0.84
LITAF-201ENST00000339430 CRB1P82279 1406 aa20.31■□□□□ 0.84
LITAF-201ENST00000339430 RBM25P49756 843 aaKnown RBP20.31■□□□□ 0.84
LITAF-201ENST00000339430 BRPF3Q9ULD4 1205 aa20.31■□□□□ 0.84
LITAF-201ENST00000339430 COL5A2P05997 1499 aaPredicted RBP20.31■□□□□ 0.84
LITAF-201ENST00000339430 TBC1D9Q6ZT07 1266 aa20.3■□□□□ 0.84
LITAF-201ENST00000339430 WDR17Q8IZU2 1322 aa20.3■□□□□ 0.84
LITAF-201ENST00000339430 GNAT3A8MTJ3 354 aa20.3■□□□□ 0.84
LITAF-201ENST00000339430 SLC4A2P04920 1241 aa20.3■□□□□ 0.84
LITAF-201ENST00000339430 STRN4Q9NRL3 753 aa20.3■□□□□ 0.84
LITAF-201ENST00000339430 FAM208AQ9UK61 1670 aaKnown RBP20.3■□□□□ 0.84
LITAF-201ENST00000339430 PLEKHO1Q53GL0 409 aaPredicted RBP20.29■□□□□ 0.84
LITAF-201ENST00000339430 TOM1L2Q6ZVM7 507 aa20.29■□□□□ 0.84
LITAF-201ENST00000339430 RTN4Q9NQC3 1192 aaKnown RBP20.29■□□□□ 0.84
LITAF-201ENST00000339430 TSPYL4Q9UJ04 414 aa20.29■□□□□ 0.84
LITAF-201ENST00000339430 RAPGEF4Q8WZA2 1011 aa20.29■□□□□ 0.84
LITAF-201ENST00000339430 MAP3K5Q99683 1374 aa20.29■□□□□ 0.84
LITAF-201ENST00000339430 EVA1CP58658 441 aa20.28■□□□□ 0.84
LITAF-201ENST00000339430 C16orf71Q8IYS4 520 aaPredicted RBP20.28■□□□□ 0.84
LITAF-201ENST00000339430 APBB1O00213 710 aa20.28■□□□□ 0.84
LITAF-201ENST00000339430 AMOTQ4VCS5 1084 aa20.28■□□□□ 0.84
LITAF-201ENST00000339430 MEIS3Q99687 375 aa20.28■□□□□ 0.84
LITAF-201ENST00000339430 DCTPP1Q9H773 170 aa20.28■□□□□ 0.84
LITAF-201ENST00000339430 BTG4Q9NY30 223 aa20.28■□□□□ 0.84
LITAF-201ENST00000339430 ZNF530Q6P9A1 599 aaPredicted RBP20.27■□□□□ 0.84
LITAF-201ENST00000339430 ATP10DQ9P241 1426 aa20.27■□□□□ 0.84
LITAF-201ENST00000339430 NUTM2BA6NNL0 878 aaPredicted RBP20.27■□□□□ 0.83
LITAF-201ENST00000339430 NUTM2EB1AL46 878 aaPredicted RBP20.27■□□□□ 0.83
LITAF-201ENST00000339430 HTATSF1O43719 755 aaKnown RBP20.27■□□□□ 0.83
LITAF-201ENST00000339430 ADAMTS2O95450 1211 aa20.27■□□□□ 0.83
LITAF-201ENST00000339430 GSPT1P15170 499 aaKnown RBP20.27■□□□□ 0.83
LITAF-201ENST00000339430 NUTM2AQ8IVF1 878 aaPredicted RBP20.27■□□□□ 0.83
LITAF-201ENST00000339430 LARP1Q6PKG0 1096 aaKnown RBP20.26■□□□□ 0.83
LITAF-201ENST00000339430 G2E3Q7L622 706 aa20.26■□□□□ 0.83
LITAF-201ENST00000339430 PLEKHM2Q8IWE5 1019 aa20.26■□□□□ 0.83
LITAF-201ENST00000339430 ANKRD44Q8N8A2 993 aa20.26■□□□□ 0.83
LITAF-201ENST00000339430 PTPRCP08575 1304 aa20.26■□□□□ 0.83
LITAF-201ENST00000339430 CEP85Q6P2H3 762 aa20.26■□□□□ 0.83
LITAF-201ENST00000339430 SLC4A10Q6U841 1118 aa20.26■□□□□ 0.83
LITAF-201ENST00000339430 CHMP5Q9NZZ3 219 aa20.26■□□□□ 0.83
LITAF-201ENST00000339430 MEGF6O75095 1541 aa20.25■□□□□ 0.83
LITAF-201ENST00000339430 F6X3S4 739 aa20.25■□□□□ 0.83
LITAF-201ENST00000339430 TATP17735 454 aaPredicted RBP20.25■□□□□ 0.83
LITAF-201ENST00000339430 IL17REQ8NFR9 667 aa20.25■□□□□ 0.83
LITAF-201ENST00000339430 SMARCA5O60264 1052 aaPredicted RBP20.24■□□□□ 0.83
LITAF-201ENST00000339430 OTUD7AQ8TE49 926 aaPredicted RBP20.24■□□□□ 0.83
LITAF-201ENST00000339430 KIF2CQ99661 725 aa20.24■□□□□ 0.83
LITAF-201ENST00000339430 COL14A1Q05707 1796 aaKnown RBP20.24■□□□□ 0.83
LITAF-201ENST00000339430 CDC45O75419 566 aa20.23■□□□□ 0.83
LITAF-201ENST00000339430 AKAP4Q5JQC9 854 aa20.23■□□□□ 0.83
LITAF-201ENST00000339430 C1orf141Q5JVX7 400 aa20.23■□□□□ 0.83
LITAF-201ENST00000339430 RPAP2Q8IXW5 612 aaPredicted RBP20.22■□□□□ 0.83
LITAF-201ENST00000339430 RBM42Q9BTD8 480 aaKnown RBP20.22■□□□□ 0.83
LITAF-201ENST00000339430 CARD10Q9BWT7 1032 aa20.22■□□□□ 0.83
LITAF-201ENST00000339430 HSP90AB1P08238 724 aaKnown RBP20.21■□□□□ 0.83
LITAF-201ENST00000339430 MCM4P33991 863 aa20.21■□□□□ 0.83
LITAF-201ENST00000339430 MPRIPQ6WCQ1 1025 aa20.21■□□□□ 0.83
LITAF-201ENST00000339430 NECTIN2Q92692 538 aa20.21■□□□□ 0.83
LITAF-201ENST00000339430 LGR6Q9HBX8 967 aa20.21■□□□□ 0.83
LITAF-201ENST00000339430 CD2BP2O95400 341 aaKnown RBP20.21■□□□□ 0.83
LITAF-201ENST00000339430 SNX21Q969T3 373 aa20.21■□□□□ 0.83
LITAF-201ENST00000339430 TTC22Q5TAA0 569 aa20.2■□□□□ 0.82
LITAF-201ENST00000339430 SPG7Q9UQ90 795 aa20.2■□□□□ 0.82
LITAF-201ENST00000339430 FOXD4L1Q9NU39 408 aa20.2■□□□□ 0.82
LITAF-201ENST00000339430 LRRC37A3O60309 1634 aa20.19■□□□□ 0.82
LITAF-201ENST00000339430 JCADQ9P266 1359 aa20.19■□□□□ 0.82
LITAF-201ENST00000339430 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.19■□□□□ 0.82
LITAF-201ENST00000339430 CEMIPQ8WUJ3 1361 aa20.18■□□□□ 0.82
LITAF-201ENST00000339430 OVOS2A0A0G2JMS6 1433 aa20.16■□□□□ 0.82
LITAF-201ENST00000339430 IL2RBP14784 551 aa20.16■□□□□ 0.82
LITAF-201ENST00000339430 ARXQ96QS3 562 aa20.16■□□□□ 0.82
LITAF-201ENST00000339430 STK31Q9BXU1 1019 aa20.16■□□□□ 0.82
LITAF-201ENST00000339430 GZF1Q9H116 711 aaPredicted RBP20.16■□□□□ 0.82
LITAF-201ENST00000339430 HSPA1LP34931 641 aa20.16■□□□□ 0.82
LITAF-201ENST00000339430 TAF7Q15545 349 aaPredicted RBP20.16■□□□□ 0.82
LITAF-201ENST00000339430 PLCH1Q4KWH8 1693 aa20.15■□□□□ 0.82
LITAF-201ENST00000339430 RNMTO43148 476 aaKnown RBP20.15■□□□□ 0.82
LITAF-201ENST00000339430 HSP90AA1P07900 732 aaKnown RBP20.15■□□□□ 0.82
LITAF-201ENST00000339430 PHKG2P15735 406 aa20.15■□□□□ 0.82
LITAF-201ENST00000339430 DDIT3P35638 169 aa20.15■□□□□ 0.82
LITAF-201ENST00000339430 PLEKHG2Q9H7P9 1386 aa20.15■□□□□ 0.82
LITAF-201ENST00000339430 CYP27B1O15528 508 aa20.14■□□□□ 0.82
LITAF-201ENST00000339430 CCT4P50991 539 aaKnown RBP20.14■□□□□ 0.82
LITAF-201ENST00000339430 IFNL2Q8IZJ0 200 aa20.14■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms