RNA–Protein interactions for RNA: ENST00000339113.8

ATAD3A-201, Transcript of ATPase family, AAA domain containing 3A, humanhuman

TSL 2

Gene ATAD3A, Length 2,330 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATAD3A-201ENST00000339113 USP35Q9P2H5 1018 aa21.64■■□□□ 1.05
ATAD3A-201ENST00000339113 TATP17735 454 aaPredicted RBP21.63■■□□□ 1.05
ATAD3A-201ENST00000339113 CCDC30Q5VVM6 783 aa21.63■■□□□ 1.05
ATAD3A-201ENST00000339113 F6X3S4 739 aa21.63■■□□□ 1.05
ATAD3A-201ENST00000339113 STK31Q9BXU1 1019 aa21.63■■□□□ 1.05
ATAD3A-201ENST00000339113 ABCC6O95255 1503 aa21.62■■□□□ 1.05
ATAD3A-201ENST00000339113 C8orf34Q49A92 452 aa21.61■■□□□ 1.05
ATAD3A-201ENST00000339113 SIRT2Q8IXJ6 389 aa21.61■■□□□ 1.05
ATAD3A-201ENST00000339113 SMC5Q8IY18 1101 aa21.61■■□□□ 1.05
ATAD3A-201ENST00000339113 CHMP4BQ9H444 224 aaKnown RBP21.61■■□□□ 1.05
ATAD3A-201ENST00000339113 SOS1Q07889 1333 aaPredicted RBP21.6■■□□□ 1.05
ATAD3A-201ENST00000339113 HDGFL1Q5TGJ6 251 aa21.6■■□□□ 1.05
ATAD3A-201ENST00000339113 NHSL1Q5SYE7 1610 aa21.59■■□□□ 1.05
ATAD3A-201ENST00000339113 PHKG2P15735 406 aa21.59■■□□□ 1.05
ATAD3A-201ENST00000339113 FLIIQ13045 1269 aa21.59■■□□□ 1.05
ATAD3A-201ENST00000339113 FAM161AQ3B820 660 aa21.59■■□□□ 1.05
ATAD3A-201ENST00000339113 EIF2S2P20042 333 aaKnown RBP21.58■■□□□ 1.05
ATAD3A-201ENST00000339113 SPG7Q9UQ90 795 aa21.58■■□□□ 1.05
ATAD3A-201ENST00000339113 KDM3BQ7LBC6 1761 aa21.58■■□□□ 1.05
ATAD3A-201ENST00000339113 OVOS2A0A0G2JMS6 1433 aa21.58■■□□□ 1.05
ATAD3A-201ENST00000339113 SLC4A10Q6U841 1118 aa21.58■■□□□ 1.04
ATAD3A-201ENST00000339113 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.58■■□□□ 1.04
ATAD3A-201ENST00000339113 CYP27B1O15528 508 aa21.57■■□□□ 1.04
ATAD3A-201ENST00000339113 WDR17Q8IZU2 1322 aa21.57■■□□□ 1.04
ATAD3A-201ENST00000339113 KDM6AO15550 1401 aaPredicted RBP21.56■■□□□ 1.04
ATAD3A-201ENST00000339113 PHAXQ9H814 394 aaKnown RBP21.56■■□□□ 1.04
ATAD3A-201ENST00000339113 FKBP5Q13451 457 aaPredicted RBP21.56■■□□□ 1.04
ATAD3A-201ENST00000339113 TOM1L2Q6ZVM7 507 aa21.56■■□□□ 1.04
ATAD3A-201ENST00000339113 MEIS3Q99687 375 aa21.56■■□□□ 1.04
ATAD3A-201ENST00000339113 VIRMAQ69YN4 1812 aaKnown RBP21.55■■□□□ 1.04
ATAD3A-201ENST00000339113 ADAMTS7Q9UKP4 1686 aa21.55■■□□□ 1.04
ATAD3A-201ENST00000339113 IFNL2Q8IZJ0 200 aa21.55■■□□□ 1.04
ATAD3A-201ENST00000339113 COL5A2P05997 1499 aaPredicted RBP21.54■■□□□ 1.04
ATAD3A-201ENST00000339113 ABCA3Q99758 1704 aa21.54■■□□□ 1.04
ATAD3A-201ENST00000339113 PRAMEF22A3QJZ6 481 aa21.54■■□□□ 1.04
ATAD3A-201ENST00000339113 HOXB7P09629 217 aa21.54■■□□□ 1.04
ATAD3A-201ENST00000339113 NPM2Q86SE8 214 aaKnown RBP21.54■■□□□ 1.04
ATAD3A-201ENST00000339113 NFATC2IPQ8NCF5 419 aa21.53■■□□□ 1.04
ATAD3A-201ENST00000339113 SLC52A2Q9HAB3 445 aa21.53■■□□□ 1.04
ATAD3A-201ENST00000339113 CHPF2Q9P2E5 772 aa21.53■■□□□ 1.04
ATAD3A-201ENST00000339113 HEG1Q9ULI3 1381 aa21.53■■□□□ 1.04
ATAD3A-201ENST00000339113 GIGYF1O75420 1035 aaPredicted RBP21.52■■□□□ 1.04
ATAD3A-201ENST00000339113 SLC39A6Q13433 755 aa21.52■■□□□ 1.04
ATAD3A-201ENST00000339113 STRN4Q9NRL3 753 aa21.52■■□□□ 1.04
ATAD3A-201ENST00000339113 ANXA1P04083 346 aa21.52■■□□□ 1.04
ATAD3A-201ENST00000339113 NUCB1Q02818 461 aa21.52■■□□□ 1.04
ATAD3A-201ENST00000339113 LARP1Q6PKG0 1096 aaKnown RBP21.52■■□□□ 1.04
ATAD3A-201ENST00000339113 LTBP4Q8N2S1 1624 aa21.52■■□□□ 1.04
ATAD3A-201ENST00000339113 CCT4P50991 539 aaKnown RBP21.51■■□□□ 1.03
ATAD3A-201ENST00000339113 SIPA1L3O60292 1781 aaPredicted RBP21.51■■□□□ 1.03
ATAD3A-201ENST00000339113 LNPKQ9C0E8 428 aa21.5■■□□□ 1.03
ATAD3A-201ENST00000339113 ATP10DQ9P241 1426 aa21.5■■□□□ 1.03
ATAD3A-201ENST00000339113 DDRGK1Q96HY6 314 aa21.49■■□□□ 1.03
ATAD3A-201ENST00000339113 DCAF5Q96JK2 942 aa21.49■■□□□ 1.03
ATAD3A-201ENST00000339113 ROBO1Q9Y6N7 1651 aa21.49■■□□□ 1.03
ATAD3A-201ENST00000339113 CEP85Q6P2H3 762 aa21.49■■□□□ 1.03
ATAD3A-201ENST00000339113 ZNF790Q6PG37 636 aa21.49■■□□□ 1.03
ATAD3A-201ENST00000339113 CHD1LQ86WJ1 897 aa21.49■■□□□ 1.03
ATAD3A-201ENST00000339113 ANKRD44Q8N8A2 993 aa21.49■■□□□ 1.03
ATAD3A-201ENST00000339113 GCC1Q96CN9 775 aa21.49■■□□□ 1.03
ATAD3A-201ENST00000339113 CARD10Q9BWT7 1032 aa21.49■■□□□ 1.03
ATAD3A-201ENST00000339113 EVA1CP58658 441 aa21.48■■□□□ 1.03
ATAD3A-201ENST00000339113 SCN11AQ9UI33 1791 aa21.48■■□□□ 1.03
ATAD3A-201ENST00000339113 PLEKHG2Q9H7P9 1386 aa21.48■■□□□ 1.03
ATAD3A-201ENST00000339113 ANKRD45Q5TZF3 282 aa21.47■■□□□ 1.03
ATAD3A-201ENST00000339113 PKD1L3Q7Z443 1732 aa21.47■■□□□ 1.03
ATAD3A-201ENST00000339113 PROSER3Q2NL68 480 aa21.46■■□□□ 1.03
ATAD3A-201ENST00000339113 ZCRB1Q8TBF4 217 aaKnown RBP21.46■■□□□ 1.03
ATAD3A-201ENST00000339113 RPAP2Q8IXW5 612 aaPredicted RBP21.46■■□□□ 1.03
ATAD3A-201ENST00000339113 CACNA1FO60840 1977 aa21.46■■□□□ 1.03
ATAD3A-201ENST00000339113 SEC24BO95487 1268 aa21.45■■□□□ 1.02
ATAD3A-201ENST00000339113 BTG4Q9NY30 223 aa21.45■■□□□ 1.02
ATAD3A-201ENST00000339113 IL2RBP14784 551 aa21.44■■□□□ 1.02
ATAD3A-201ENST00000339113 DCTPP1Q9H773 170 aa21.44■■□□□ 1.02
ATAD3A-201ENST00000339113 DBF4Q9UBU7 674 aaPredicted RBP21.44■■□□□ 1.02
ATAD3A-201ENST00000339113 PI4KAP2A4QPH2 592 aa21.43■■□□□ 1.02
ATAD3A-201ENST00000339113 HSP90AB1P08238 724 aaKnown RBP21.43■■□□□ 1.02
ATAD3A-201ENST00000339113 PI4KAP1Q8N8J0 262 aa21.43■■□□□ 1.02
ATAD3A-201ENST00000339113 ZNF496Q96IT1 587 aaPredicted RBP21.43■■□□□ 1.02
ATAD3A-201ENST00000339113 CHMP4AQ9BY43 222 aa21.43■■□□□ 1.02
ATAD3A-201ENST00000339113 CABP4P57796 275 aa21.42■■□□□ 1.02
ATAD3A-201ENST00000339113 USP44Q9H0E7 712 aa21.42■■□□□ 1.02
ATAD3A-201ENST00000339113 AHDC1Q5TGY3 1603 aaPredicted RBP21.41■■□□□ 1.02
ATAD3A-201ENST00000339113 PCDH11XQ9BZA7 1347 aa21.41■■□□□ 1.02
ATAD3A-201ENST00000339113 PCDH11YQ9BZA8 1340 aa21.41■■□□□ 1.02
ATAD3A-201ENST00000339113 MRC1P22897 1456 aa21.41■■□□□ 1.02
ATAD3A-201ENST00000339113 DDX54Q8TDD1 881 aaKnown RBP21.41■■□□□ 1.02
ATAD3A-201ENST00000339113 GNAI2P04899 355 aa21.4■■□□□ 1.02
ATAD3A-201ENST00000339113 PDIA6Q15084 440 aa21.4■■□□□ 1.02
ATAD3A-201ENST00000339113 PRKCSHP14314 528 aaPredicted RBP21.4■■□□□ 1.02
ATAD3A-201ENST00000339113 DNAAF4Q8WXU2 420 aa21.4■■□□□ 1.02
ATAD3A-201ENST00000339113 ADCY9O60503 1353 aa21.4■■□□□ 1.02
ATAD3A-201ENST00000339113 PXDNLA1KZ92 1463 aa21.4■■□□□ 1.02
ATAD3A-201ENST00000339113 PARP4Q9UKK3 1724 aaKnown RBP21.4■■□□□ 1.02
ATAD3A-201ENST00000339113 GNAI3P08754 354 aa21.39■■□□□ 1.01
ATAD3A-201ENST00000339113 BEND3Q5T5X7 828 aa21.39■■□□□ 1.01
ATAD3A-201ENST00000339113 SRCIN1Q9C0H9 1055 aa21.38■■□□□ 1.01
ATAD3A-201ENST00000339113 USP16Q9Y5T5 823 aa21.38■■□□□ 1.01
ATAD3A-201ENST00000339113 TTC5Q8N0Z6 440 aa21.38■■□□□ 1.01
ATAD3A-201ENST00000339113 NKX1-1Q15270 411 aaPredicted RBP21.37■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms