RNA–Protein interactions for RNA: ENST00000338469.3

TREM2-201, Transcript of triggering receptor expressed on myeloid cells 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TREM2, Length 860 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREM2-201ENST00000338469 SULT6B1Q6IMI4 303 aa15.75■□□□□ 0.11
TREM2-201ENST00000338469 PHF14O94880 888 aa15.74■□□□□ 0.11
TREM2-201ENST00000338469 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.73■□□□□ 0.11
TREM2-201ENST00000338469 ATP6V1AP38606 617 aa15.73■□□□□ 0.11
TREM2-201ENST00000338469 MTHFSP49914 203 aa15.73■□□□□ 0.11
TREM2-201ENST00000338469 PLEKHO1Q53GL0 409 aaPredicted RBP15.73■□□□□ 0.11
TREM2-201ENST00000338469 ZNF530Q6P9A1 599 aaPredicted RBP15.73■□□□□ 0.11
TREM2-201ENST00000338469 KDRP35968 1356 aa15.73■□□□□ 0.11
TREM2-201ENST00000338469 ERVV-2B6SEH9 535 aa15.72■□□□□ 0.11
TREM2-201ENST00000338469 YBX3P16989 372 aaKnown RBP eCLIP15.72■□□□□ 0.11
TREM2-201ENST00000338469 CC2D1BQ5T0F9 858 aaKnown RBP15.72■□□□□ 0.11
TREM2-201ENST00000338469 AK7Q96M32 723 aa15.72■□□□□ 0.11
TREM2-201ENST00000338469 GPR162Q16538 588 aa15.71■□□□□ 0.11
TREM2-201ENST00000338469 DCAF5Q96JK2 942 aa15.71■□□□□ 0.11
TREM2-201ENST00000338469 FLAD1Q8NFF5 587 aa15.7■□□□□ 0.1
TREM2-201ENST00000338469 PLEKHG2Q9H7P9 1386 aa15.7■□□□□ 0.1
TREM2-201ENST00000338469 GNPATO15228 680 aa15.69■□□□□ 0.1
TREM2-201ENST00000338469 CNGB1Q14028 1251 aaPredicted RBP15.69■□□□□ 0.1
TREM2-201ENST00000338469 AMOTQ4VCS5 1084 aa15.69■□□□□ 0.1
TREM2-201ENST00000338469 PELP1Q8IZL8 1130 aaKnown RBP15.69■□□□□ 0.1
TREM2-201ENST00000338469 NFATC2IPQ8NCF5 419 aa15.69■□□□□ 0.1
TREM2-201ENST00000338469 RBM42Q9BTD8 480 aaKnown RBP15.69■□□□□ 0.1
TREM2-201ENST00000338469 LGR6Q9HBX8 967 aa15.69■□□□□ 0.1
TREM2-201ENST00000338469 CHD4Q14839 1912 aa15.68■□□□□ 0.1
TREM2-201ENST00000338469 HMOX1P09601 288 aa15.68■□□□□ 0.1
TREM2-201ENST00000338469 SSFA2P28290 1259 aa15.68■□□□□ 0.1
TREM2-201ENST00000338469 CABP4P57796 275 aa15.68■□□□□ 0.1
TREM2-201ENST00000338469 MYH14Q7Z406 1995 aaKnown RBP15.67■□□□□ 0.1
TREM2-201ENST00000338469 HSP90AB1P08238 724 aaKnown RBP15.67■□□□□ 0.1
TREM2-201ENST00000338469 PTCD1O75127 700 aaKnown RBP15.65■□□□□ 0.1
TREM2-201ENST00000338469 MTHFSDQ2M296 383 aaKnown RBP15.65■□□□□ 0.1
TREM2-201ENST00000338469 ARHGEF1Q92888 912 aaKnown RBP15.65■□□□□ 0.1
TREM2-201ENST00000338469 WWC3Q9ULE0 1092 aa15.65■□□□□ 0.1
TREM2-201ENST00000338469 CD2APQ9Y5K6 639 aa15.65■□□□□ 0.1
TREM2-201ENST00000338469 COL5A3P25940 1745 aaPredicted RBP15.65■□□□□ 0.1
TREM2-201ENST00000338469 COL3A1P02461 1466 aaPredicted RBP15.65■□□□□ 0.1
TREM2-201ENST00000338469 C1orf141Q5JVX7 400 aa15.64■□□□□ 0.09
TREM2-201ENST00000338469 SCN11AQ9UI33 1791 aa15.64■□□□□ 0.09
TREM2-201ENST00000338469 ZNF831Q5JPB2 1677 aa15.63■□□□□ 0.09
TREM2-201ENST00000338469 AKAP4Q5JQC9 854 aa15.63■□□□□ 0.09
TREM2-201ENST00000338469 RC3H1Q5TC82 1133 aaKnown RBP15.63■□□□□ 0.09
TREM2-201ENST00000338469 DIAPH1O60610 1272 aaKnown RBP15.62■□□□□ 0.09
TREM2-201ENST00000338469 RPS6KA4O75676 772 aa15.62■□□□□ 0.09
TREM2-201ENST00000338469 SLC39A6Q13433 755 aa15.62■□□□□ 0.09
TREM2-201ENST00000338469 TRAPPC3LQ5T215 181 aa15.62■□□□□ 0.09
TREM2-201ENST00000338469 CNTNAP4Q9C0A0 1308 aa15.62■□□□□ 0.09
TREM2-201ENST00000338469 TJP1Q07157 1748 aa15.61■□□□□ 0.09
TREM2-201ENST00000338469 RNMTO43148 476 aaKnown RBP15.61■□□□□ 0.09
TREM2-201ENST00000338469 GIGYF1O75420 1035 aaPredicted RBP15.61■□□□□ 0.09
TREM2-201ENST00000338469 MMP10P09238 476 aa15.61■□□□□ 0.09
TREM2-201ENST00000338469 GYS1P13807 737 aa15.61■□□□□ 0.09
TREM2-201ENST00000338469 IFFO2Q5TF58 517 aa15.61■□□□□ 0.09
TREM2-201ENST00000338469 INTS5Q6P9B9 1019 aaKnown RBP15.61■□□□□ 0.09
TREM2-201ENST00000338469 RTCBQ9Y3I0 505 aaKnown RBP15.61■□□□□ 0.09
TREM2-201ENST00000338469 NPC1L1Q9UHC9 1359 aa15.61■□□□□ 0.09
TREM2-201ENST00000338469 HMGB2P26583 209 aaKnown RBP15.6■□□□□ 0.09
TREM2-201ENST00000338469 CRKLP46109 303 aaKnown RBP15.6■□□□□ 0.09
TREM2-201ENST00000338469 SLC52A2Q9HAB3 445 aa15.6■□□□□ 0.09
TREM2-201ENST00000338469 SRP68Q9UHB9 627 aaKnown RBP15.6■□□□□ 0.09
TREM2-201ENST00000338469 DIEXFQ68CQ4 756 aaKnown RBP15.59■□□□□ 0.09
TREM2-201ENST00000338469 DNAJC10Q8IXB1 793 aa15.59■□□□□ 0.09
TREM2-201ENST00000338469 VIRMAQ69YN4 1812 aaKnown RBP15.59■□□□□ 0.09
TREM2-201ENST00000338469 ADAMTS7Q9UKP4 1686 aa15.58■□□□□ 0.08
TREM2-201ENST00000338469 KIAA1551Q9HCM1 1747 aa15.58■□□□□ 0.08
TREM2-201ENST00000338469 MRC1P22897 1456 aa15.58■□□□□ 0.08
TREM2-201ENST00000338469 C4AP0C0L4 1744 aa15.57■□□□□ 0.08
TREM2-201ENST00000338469 GRIN3BO60391 1043 aa15.57■□□□□ 0.08
TREM2-201ENST00000338469 IL17REQ8NFR9 667 aa15.57■□□□□ 0.08
TREM2-201ENST00000338469 PHACTR3Q96KR7 559 aa15.57■□□□□ 0.08
TREM2-201ENST00000338469 CICQ96RK0 1608 aaPredicted RBP15.57■□□□□ 0.08
TREM2-201ENST00000338469 U2SURPO15042 1029 aaKnown RBP15.56■□□□□ 0.08
TREM2-201ENST00000338469 FKBP8Q14318 412 aa15.56■□□□□ 0.08
TREM2-201ENST00000338469 KCPQ6ZWJ8 1503 aa15.56■□□□□ 0.08
TREM2-201ENST00000338469 KIF13BQ9NQT8 1826 aa15.55■□□□□ 0.08
TREM2-201ENST00000338469 PXDNLA1KZ92 1463 aa15.55■□□□□ 0.08
TREM2-201ENST00000338469 A0A0G2JLW4 131 aa15.55■□□□□ 0.08
TREM2-201ENST00000338469 CYP19A1P11511 503 aaPredicted RBP15.55■□□□□ 0.08
TREM2-201ENST00000338469 ADRA2BP18089 450 aa15.55■□□□□ 0.08
TREM2-201ENST00000338469 RFC4P35249 363 aa15.55■□□□□ 0.08
TREM2-201ENST00000338469 DDR1Q08345 913 aa15.55■□□□□ 0.08
TREM2-201ENST00000338469 NLGN1Q8N2Q7 840 aa15.55■□□□□ 0.08
TREM2-201ENST00000338469 N4BP2Q86UW6 1770 aaPredicted RBP15.54■□□□□ 0.08
TREM2-201ENST00000338469 CEP350Q5VT06 3117 aa15.54■□□□□ 0.08
TREM2-201ENST00000338469 USP42Q9H9J4 1324 aaKnown RBP15.53■□□□□ 0.08
TREM2-201ENST00000338469 ANP32CO43423 234 aa15.53■□□□□ 0.08
TREM2-201ENST00000338469 KCNA3P22001 575 aa15.53■□□□□ 0.08
TREM2-201ENST00000338469 PPP2R1AP30153 589 aa15.53■□□□□ 0.08
TREM2-201ENST00000338469 C10orf71Q711Q0 1435 aa15.52■□□□□ 0.08
TREM2-201ENST00000338469 SOS1Q07889 1333 aaPredicted RBP15.52■□□□□ 0.08
TREM2-201ENST00000338469 DPEP1P16444 411 aa15.52■□□□□ 0.08
TREM2-201ENST00000338469 RALBP1Q15311 655 aa15.52■□□□□ 0.08
TREM2-201ENST00000338469 RSPH6AQ9H0K4 717 aa15.52■□□□□ 0.08
TREM2-201ENST00000338469 BCL2L12Q9HB09 334 aa15.52■□□□□ 0.08
TREM2-201ENST00000338469 CCDC87Q9NVE4 849 aa15.52■□□□□ 0.08
TREM2-201ENST00000338469 ZBTB1Q9Y2K1 713 aa15.52■□□□□ 0.08
TREM2-201ENST00000338469 KCNQ3O43525 872 aa15.51■□□□□ 0.07
TREM2-201ENST00000338469 TM4SF1P30408 202 aa15.51■□□□□ 0.07
TREM2-201ENST00000338469 USPL1Q5W0Q7 1092 aa15.51■□□□□ 0.07
TREM2-201ENST00000338469 ATP10DQ9P241 1426 aa15.51■□□□□ 0.07
TREM2-201ENST00000338469 ADCY9O60503 1353 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms