RNA–Protein interactions for RNA: ENST00000337620.8

CBX3-201, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-201ENST00000337620 KCNQ3O43525 872 aa18.82■□□□□ 0.6
CBX3-201ENST00000337620 B4GALNT3Q6L9W6 998 aa18.82■□□□□ 0.6
CBX3-201ENST00000337620 NFATC2IPQ8NCF5 419 aa18.82■□□□□ 0.6
CBX3-201ENST00000337620 NRAPQ86VF7 1730 aa18.81■□□□□ 0.6
CBX3-201ENST00000337620 IPO8O15397 1037 aaKnown RBP18.81■□□□□ 0.6
CBX3-201ENST00000337620 SCN11AQ9UI33 1791 aa18.81■□□□□ 0.6
CBX3-201ENST00000337620 ADAMTS7Q9UKP4 1686 aa18.81■□□□□ 0.6
CBX3-201ENST00000337620 SPATA31A1Q5TZJ5 1347 aa18.8■□□□□ 0.6
CBX3-201ENST00000337620 BRPF1P55201 1214 aaPredicted RBP18.8■□□□□ 0.6
CBX3-201ENST00000337620 NWD2Q9ULI1 1742 aa18.8■□□□□ 0.6
CBX3-201ENST00000337620 EIF4A1P60842 406 aaKnown RBP18.8■□□□□ 0.6
CBX3-201ENST00000337620 UNC5CLQ8IV45 518 aa18.8■□□□□ 0.6
CBX3-201ENST00000337620 CABP4P57796 275 aa18.79■□□□□ 0.6
CBX3-201ENST00000337620 ATF7IPQ6VMQ6 1270 aa18.79■□□□□ 0.6
CBX3-201ENST00000337620 FTSJ3Q8IY81 847 aaKnown RBP18.79■□□□□ 0.6
CBX3-201ENST00000337620 COG6Q9Y2V7 657 aa18.79■□□□□ 0.6
CBX3-201ENST00000337620 RLBP1P12271 317 aa18.79■□□□□ 0.6
CBX3-201ENST00000337620 TRIM27P14373 513 aa18.79■□□□□ 0.6
CBX3-201ENST00000337620 MEX3CQ5U5Q3 659 aaKnown RBP18.79■□□□□ 0.6
CBX3-201ENST00000337620 DZIP1LQ8IYY4 767 aaKnown RBP18.79■□□□□ 0.6
CBX3-201ENST00000337620 CCDC136Q96JN2 1154 aa18.79■□□□□ 0.6
CBX3-201ENST00000337620 THRAP3Q9Y2W1 955 aaKnown RBP18.79■□□□□ 0.6
CBX3-201ENST00000337620 DISP2A7MBM2 1401 aa18.78■□□□□ 0.6
CBX3-201ENST00000337620 LRP6O75581 1613 aa18.78■□□□□ 0.6
CBX3-201ENST00000337620 SPATA31A5Q5VU36 1347 aa18.78■□□□□ 0.6
CBX3-201ENST00000337620 SPATA31A7Q8IWB4 1347 aa18.78■□□□□ 0.6
CBX3-201ENST00000337620 EXOC5O00471 708 aa18.78■□□□□ 0.6
CBX3-201ENST00000337620 MS4A1P11836 297 aa18.78■□□□□ 0.6
CBX3-201ENST00000337620 KDM3BQ7LBC6 1761 aa18.78■□□□□ 0.6
CBX3-201ENST00000337620 NKX1-1Q15270 411 aaPredicted RBP18.77■□□□□ 0.6
CBX3-201ENST00000337620 NECTIN2Q92692 538 aa18.77■□□□□ 0.6
CBX3-201ENST00000337620 SIPA1L3O60292 1781 aaPredicted RBP18.77■□□□□ 0.6
CBX3-201ENST00000337620 SLC39A6Q13433 755 aa18.77■□□□□ 0.6
CBX3-201ENST00000337620 SHANK3Q9BYB0 1731 aa18.76■□□□□ 0.59
CBX3-201ENST00000337620 SLC4A2P04920 1241 aa18.76■□□□□ 0.59
CBX3-201ENST00000337620 CDCA7Q9BWT1 371 aaPredicted RBP18.76■□□□□ 0.59
CBX3-201ENST00000337620 SOS1Q07889 1333 aaPredicted RBP18.76■□□□□ 0.59
CBX3-201ENST00000337620 CCDC30Q5VVM6 783 aa18.76■□□□□ 0.59
CBX3-201ENST00000337620 ZNF790Q6PG37 636 aa18.76■□□□□ 0.59
CBX3-201ENST00000337620 FNBP4Q8N3X1 1017 aaPredicted RBP18.76■□□□□ 0.59
CBX3-201ENST00000337620 STK31Q9BXU1 1019 aa18.75■□□□□ 0.59
CBX3-201ENST00000337620 BCL9LQ86UU0 1499 aa18.75■□□□□ 0.59
CBX3-201ENST00000337620 ERVV-2B6SEH9 535 aa18.74■□□□□ 0.59
CBX3-201ENST00000337620 ARHGAP45Q92619 1136 aa18.74■□□□□ 0.59
CBX3-201ENST00000337620 USP21Q9UK80 565 aa18.74■□□□□ 0.59
CBX3-201ENST00000337620 EIF2S2P20042 333 aaKnown RBP18.74■□□□□ 0.59
CBX3-201ENST00000337620 HDGFL1Q5TGJ6 251 aa18.74■□□□□ 0.59
CBX3-201ENST00000337620 MRC1P22897 1456 aa18.73■□□□□ 0.59
CBX3-201ENST00000337620 VPS72Q15906 364 aa18.73■□□□□ 0.59
CBX3-201ENST00000337620 TTC5Q8N0Z6 440 aa18.73■□□□□ 0.59
CBX3-201ENST00000337620 DDB1Q16531 1140 aa18.73■□□□□ 0.59
CBX3-201ENST00000337620 WNK3Q9BYP7 1800 aa18.72■□□□□ 0.59
CBX3-201ENST00000337620 HOXB7P09629 217 aa18.72■□□□□ 0.59
CBX3-201ENST00000337620 MVPQ14764 893 aaKnown RBP18.72■□□□□ 0.59
CBX3-201ENST00000337620 BARGINQ6ZT62 677 aa18.72■□□□□ 0.59
CBX3-201ENST00000337620 GIGYF1O75420 1035 aaPredicted RBP18.71■□□□□ 0.59
CBX3-201ENST00000337620 ITPRIPQ8IWB1 547 aa18.71■□□□□ 0.59
CBX3-201ENST00000337620 API5Q9BZZ5 524 aaKnown RBP18.71■□□□□ 0.59
CBX3-201ENST00000337620 TMEM57Q8N5G2 664 aa18.71■□□□□ 0.59
CBX3-201ENST00000337620 FAM98CQ17RN3 349 aaKnown RBP18.7■□□□□ 0.58
CBX3-201ENST00000337620 CHMP4AQ9BY43 222 aa18.7■□□□□ 0.58
CBX3-201ENST00000337620 TNS2Q63HR2 1409 aa18.7■□□□□ 0.58
CBX3-201ENST00000337620 PRAMEF22A3QJZ6 481 aa18.7■□□□□ 0.58
CBX3-201ENST00000337620 G2E3Q7L622 706 aa18.7■□□□□ 0.58
CBX3-201ENST00000337620 HEG1Q9ULI3 1381 aa18.69■□□□□ 0.58
CBX3-201ENST00000337620 ZNF496Q96IT1 587 aaPredicted RBP18.69■□□□□ 0.58
CBX3-201ENST00000337620 TMOD3Q9NYL9 352 aa18.69■□□□□ 0.58
CBX3-201ENST00000337620 PTPRCP08575 1304 aa18.68■□□□□ 0.58
CBX3-201ENST00000337620 AFF2P51816 1311 aa18.68■□□□□ 0.58
CBX3-201ENST00000337620 FMNL2Q96PY5 1086 aa18.68■□□□□ 0.58
CBX3-201ENST00000337620 DDX19BQ9UMR2 479 aa18.67■□□□□ 0.58
CBX3-201ENST00000337620 A0A0G2JS52 829 aa18.67■□□□□ 0.58
CBX3-201ENST00000337620 ABCC4O15439 1325 aa18.67■□□□□ 0.58
CBX3-201ENST00000337620 MYT1Q01538 1121 aa18.67■□□□□ 0.58
CBX3-201ENST00000337620 CHPF2Q9P2E5 772 aa18.67■□□□□ 0.58
CBX3-201ENST00000337620 FLIIQ13045 1269 aa18.66■□□□□ 0.58
CBX3-201ENST00000337620 TOGARAM1Q9Y4F4 1720 aa18.66■□□□□ 0.58
CBX3-201ENST00000337620 SYTL4Q96C24 671 aaPredicted RBP18.65■□□□□ 0.58
CBX3-201ENST00000337620 SNRPA1P09661 255 aaKnown RBP18.65■□□□□ 0.58
CBX3-201ENST00000337620 FKBP5Q13451 457 aaPredicted RBP18.65■□□□□ 0.58
CBX3-201ENST00000337620 MARCH10Q8NA82 808 aaPredicted RBP18.65■□□□□ 0.58
CBX3-201ENST00000337620 PIGBQ92521 554 aa18.65■□□□□ 0.58
CBX3-201ENST00000337620 KAT6BQ8WYB5 2073 aa18.64■□□□□ 0.58
CBX3-201ENST00000337620 AAMPQ13685 434 aa18.64■□□□□ 0.57
CBX3-201ENST00000337620 PHAXQ9H814 394 aaKnown RBP18.64■□□□□ 0.57
CBX3-201ENST00000337620 PTCD1O75127 700 aaKnown RBP18.64■□□□□ 0.57
CBX3-201ENST00000337620 ANXA1P04083 346 aa18.64■□□□□ 0.57
CBX3-201ENST00000337620 PELP1Q8IZL8 1130 aaKnown RBP18.64■□□□□ 0.57
CBX3-201ENST00000337620 DBF4Q9UBU7 674 aaPredicted RBP18.64■□□□□ 0.57
CBX3-201ENST00000337620 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.64■□□□□ 0.57
CBX3-201ENST00000337620 RGS12O14924 1447 aa18.63■□□□□ 0.57
CBX3-201ENST00000337620 CACNA1FO60840 1977 aa18.63■□□□□ 0.57
CBX3-201ENST00000337620 F6X3S4 739 aa18.62■□□□□ 0.57
CBX3-201ENST00000337620 GJD4Q96KN9 370 aaPredicted RBP18.62■□□□□ 0.57
CBX3-201ENST00000337620 PRIM1P49642 420 aaKnown RBP18.62■□□□□ 0.57
CBX3-201ENST00000337620 SLC4A10Q6U841 1118 aa18.62■□□□□ 0.57
CBX3-201ENST00000337620 USP16Q9Y5T5 823 aa18.62■□□□□ 0.57
CBX3-201ENST00000337620 TRPC5Q9UL62 973 aaPredicted RBP18.61■□□□□ 0.57
CBX3-201ENST00000337620 ASAP1Q9ULH1 1129 aa18.61■□□□□ 0.57
CBX3-201ENST00000337620 ACSBG1Q96GR2 724 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms