RNA–Protein interactions for RNA: ENST00000337526.10

RTN4-202, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,790 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-202ENST00000337526 ZC3H6P61129 1189 aaKnown RBP16.16■□□□□ 0.18
RTN4-202ENST00000337526 HDAC1Q13547 482 aaPredicted RBP16.16■□□□□ 0.18
RTN4-202ENST00000337526 LARP1Q6PKG0 1096 aaKnown RBP16.16■□□□□ 0.18
RTN4-202ENST00000337526 PDCL2Q8N4E4 241 aa16.16■□□□□ 0.18
RTN4-202ENST00000337526 CCDC85AQ96PX6 553 aaPredicted RBP16.16■□□□□ 0.18
RTN4-202ENST00000337526 FLIIQ13045 1269 aa16.15■□□□□ 0.18
RTN4-202ENST00000337526 STIM1Q13586 685 aa16.15■□□□□ 0.18
RTN4-202ENST00000337526 IMMTQ16891 758 aaKnown RBP16.15■□□□□ 0.18
RTN4-202ENST00000337526 PTPRCP08575 1304 aa16.15■□□□□ 0.18
RTN4-202ENST00000337526 IDH1O75874 414 aaKnown RBP16.15■□□□□ 0.18
RTN4-202ENST00000337526 CFAP100Q494V2 611 aa16.15■□□□□ 0.18
RTN4-202ENST00000337526 LEKR1Q6ZMV7 388 aa16.15■□□□□ 0.18
RTN4-202ENST00000337526 C14orf93Q9H972 538 aaKnown RBP16.15■□□□□ 0.18
RTN4-202ENST00000337526 DHX29Q7Z478 1369 aaKnown RBP16.15■□□□□ 0.18
RTN4-202ENST00000337526 DNAAF4Q8WXU2 420 aa16.15■□□□□ 0.18
RTN4-202ENST00000337526 UBAC1Q9BSL1 405 aa16.15■□□□□ 0.18
RTN4-202ENST00000337526 KLHL40Q2TBA0 621 aa16.14■□□□□ 0.17
RTN4-202ENST00000337526 CCDC8Q9H0W5 538 aaPredicted RBP16.14■□□□□ 0.17
RTN4-202ENST00000337526 NOL7Q9UMY1 257 aaKnown RBP16.14■□□□□ 0.17
RTN4-202ENST00000337526 IL16Q14005 1332 aa16.14■□□□□ 0.17
RTN4-202ENST00000337526 TDO2P48775 406 aa16.14■□□□□ 0.17
RTN4-202ENST00000337526 PRDM11Q9NQV5 511 aa16.14■□□□□ 0.17
RTN4-202ENST00000337526 PLEKHH1Q9ULM0 1364 aa16.14■□□□□ 0.17
RTN4-202ENST00000337526 KCNH5Q8NCM2 988 aa16.14■□□□□ 0.17
RTN4-202ENST00000337526 UBXN4Q92575 508 aa16.14■□□□□ 0.17
RTN4-202ENST00000337526 LARP6Q9BRS8 491 aaKnown RBP16.14■□□□□ 0.17
RTN4-202ENST00000337526 MBIPQ9NS73 344 aa16.14■□□□□ 0.17
RTN4-202ENST00000337526 WASLO00401 505 aaPredicted RBP16.14■□□□□ 0.17
RTN4-202ENST00000337526 ODF2Q5BJF6 829 aa16.14■□□□□ 0.17
RTN4-202ENST00000337526 NSD2O96028 1365 aa16.13■□□□□ 0.17
RTN4-202ENST00000337526 SFPQP23246 707 aaKnown RBP eCLIP16.13■□□□□ 0.172e-6■■■□□ 15.5
RTN4-202ENST00000337526 PKNOX2Q96KN3 472 aa16.13■□□□□ 0.17
RTN4-202ENST00000337526 ERLIN1O75477 346 aa16.13■□□□□ 0.17
RTN4-202ENST00000337526 KRT18P05783 430 aaKnown RBP16.13■□□□□ 0.17
RTN4-202ENST00000337526 NUCB1Q02818 461 aa16.13■□□□□ 0.17
RTN4-202ENST00000337526 PTPN14Q15678 1187 aa16.13■□□□□ 0.17
RTN4-202ENST00000337526 ANKLE2Q86XL3 938 aa16.13■□□□□ 0.17
RTN4-202ENST00000337526 POGZQ7Z3K3 1410 aa16.12■□□□□ 0.17
RTN4-202ENST00000337526 FAM83GA6ND36 823 aa16.12■□□□□ 0.17
RTN4-202ENST00000337526 ZFYVE27Q5T4F4 411 aa16.12■□□□□ 0.17
RTN4-202ENST00000337526 TTC22Q5TAA0 569 aa16.12■□□□□ 0.17
RTN4-202ENST00000337526 ANO10Q9NW15 660 aa16.12■□□□□ 0.17
RTN4-202ENST00000337526 BIVM-ERCC5R4GMW8 1640 aa16.12■□□□□ 0.17
RTN4-202ENST00000337526 C8orf34Q49A92 452 aa16.12■□□□□ 0.17
RTN4-202ENST00000337526 CKAP2LQ8IYA6 745 aa16.12■□□□□ 0.17
RTN4-202ENST00000337526 DEF6Q9H4E7 631 aa16.12■□□□□ 0.17
RTN4-202ENST00000337526 SKIDA1Q1XH10 827 aa16.11■□□□□ 0.17
RTN4-202ENST00000337526 USHBP1Q8N6Y0 703 aa16.11■□□□□ 0.17
RTN4-202ENST00000337526 ARHGAP45Q92619 1136 aa16.11■□□□□ 0.17
RTN4-202ENST00000337526 ECHDC1Q9NTX5 307 aa16.11■□□□□ 0.17
RTN4-202ENST00000337526 DBF4Q9UBU7 674 aaPredicted RBP16.11■□□□□ 0.17
RTN4-202ENST00000337526 NOS1P29475 1434 aa16.1■□□□□ 0.17
RTN4-202ENST00000337526 KIF2AO00139 706 aaPredicted RBP16.1■□□□□ 0.17
RTN4-202ENST00000337526 STX6O43752 255 aa16.1■□□□□ 0.17
RTN4-202ENST00000337526 HSP90AB2PQ58FF8 381 aa16.1■□□□□ 0.17
RTN4-202ENST00000337526 WASF1Q92558 559 aa16.1■□□□□ 0.17
RTN4-202ENST00000337526 AIDAQ96BJ3 306 aa16.1■□□□□ 0.17
RTN4-202ENST00000337526 LUC7LQ9NQ29 371 aaKnown RBP16.1■□□□□ 0.17
RTN4-202ENST00000337526 TFIP11Q9UBB9 837 aaKnown RBP16.1■□□□□ 0.17
RTN4-202ENST00000337526 TSHZ3Q63HK5 1081 aa16.1■□□□□ 0.17
RTN4-202ENST00000337526 LRP2BPQ9P2M1 347 aa16.1■□□□□ 0.17
RTN4-202ENST00000337526 PARD3Q8TEW0 1356 aa16.1■□□□□ 0.17
RTN4-202ENST00000337526 PTCD1O75127 700 aaKnown RBP16.1■□□□□ 0.17
RTN4-202ENST00000337526 IFIT1P09914 478 aaKnown RBP16.1■□□□□ 0.17
RTN4-202ENST00000337526 MYO6Q9UM54 1294 aa16.1■□□□□ 0.17
RTN4-202ENST00000337526 FBXO31Q5XUX0 539 aaPredicted RBP16.09■□□□□ 0.17
RTN4-202ENST00000337526 MYD88Q99836 296 aa16.09■□□□□ 0.17
RTN4-202ENST00000337526 EIF3JO75822 258 aaKnown RBP16.09■□□□□ 0.17
RTN4-202ENST00000337526 GUCY1B3Q02153 619 aa16.09■□□□□ 0.17
RTN4-202ENST00000337526 ARHGAP29Q52LW3 1261 aa16.09■□□□□ 0.17
RTN4-202ENST00000337526 MPRIPQ6WCQ1 1025 aa16.09■□□□□ 0.17
RTN4-202ENST00000337526 C8orf76Q96K31 380 aa16.09■□□□□ 0.17
RTN4-202ENST00000337526 FBLN1P23142 703 aa16.09■□□□□ 0.17
RTN4-202ENST00000337526 AMOTQ4VCS5 1084 aa16.09■□□□□ 0.17
RTN4-202ENST00000337526 KIF18AQ8NI77 898 aa16.09■□□□□ 0.17
RTN4-202ENST00000337526 SPINK5Q9NQ38 1064 aaPredicted RBP16.09■□□□□ 0.17
RTN4-202ENST00000337526 HMGB1P09429 215 aaKnown RBP16.09■□□□□ 0.17
RTN4-202ENST00000337526 METTL24Q5JXM2 366 aa16.09■□□□□ 0.17
RTN4-202ENST00000337526 XRCC6P12956 609 aaKnown RBP eCLIP16.08■□□□□ 0.17
RTN4-202ENST00000337526 SDSP20132 328 aa16.08■□□□□ 0.17
RTN4-202ENST00000337526 SOGA3Q5TF21 947 aa16.08■□□□□ 0.17
RTN4-202ENST00000337526 CCDC181Q5TID7 509 aa16.08■□□□□ 0.17
RTN4-202ENST00000337526 TSPYL1Q9H0U9 437 aa16.08■□□□□ 0.17
RTN4-202ENST00000337526 RBM27Q9P2N5 1060 aaKnown RBP16.08■□□□□ 0.17
RTN4-202ENST00000337526 EPB41L2O43491 1005 aaKnown RBP16.08■□□□□ 0.16
RTN4-202ENST00000337526 ATP2B2Q01814 1243 aa16.08■□□□□ 0.16
RTN4-202ENST00000337526 DDX19AQ9NUU7 478 aaKnown RBP16.08■□□□□ 0.16
RTN4-202ENST00000337526 RAI14Q9P0K7 980 aa16.08■□□□□ 0.16
RTN4-202ENST00000337526 AKAP2Q9Y2D5 859 aa16.08■□□□□ 0.16
RTN4-202ENST00000337526 KIF14Q15058 1648 aa16.08■□□□□ 0.16
RTN4-202ENST00000337526 PPP1R42Q7Z4L9 355 aa16.08■□□□□ 0.16
RTN4-202ENST00000337526 TANGO6Q9C0B7 1094 aa16.08■□□□□ 0.16
RTN4-202ENST00000337526 ZHX3Q9H4I2 956 aa16.08■□□□□ 0.16
RTN4-202ENST00000337526 CLIP2Q9UDT6 1046 aa16.08■□□□□ 0.16
RTN4-202ENST00000337526 EVI5LQ96CN4 794 aa16.07■□□□□ 0.16
RTN4-202ENST00000337526 ABCF2Q9UG63 623 aa16.07■□□□□ 0.16
RTN4-202ENST00000337526 MCM5P33992 734 aa16.07■□□□□ 0.16
RTN4-202ENST00000337526 TMX3Q96JJ7 454 aa16.07■□□□□ 0.16
RTN4-202ENST00000337526 GJB2P29033 226 aa16.07■□□□□ 0.16
RTN4-202ENST00000337526 MEIS3Q99687 375 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms