RNA–Protein interactions for RNA: ENST00000336840.10

PAX3-202, Transcript of paired box 3, humanhuman

TSL 1 (best) BASIC

Gene PAX3, Length 2,038 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX3-202ENST00000336840 VAMP4O75379 141 aa16.24■□□□□ 0.19
PAX3-202ENST00000336840 TWISTNBQ3B726 338 aaPredicted RBP16.24■□□□□ 0.19
PAX3-202ENST00000336840 TSPYL6Q8N831 410 aa16.24■□□□□ 0.19
PAX3-202ENST00000336840 CCDC9Q9Y3X0 531 aaKnown RBP16.24■□□□□ 0.19
PAX3-202ENST00000336840 AFF2P51816 1311 aa16.24■□□□□ 0.19
PAX3-202ENST00000336840 ATRNO75882 1429 aa16.24■□□□□ 0.19
PAX3-202ENST00000336840 BCAR3O75815 825 aa16.24■□□□□ 0.19
PAX3-202ENST00000336840 UBR2Q8IWV8 1755 aa16.24■□□□□ 0.19
PAX3-202ENST00000336840 BTBD11A6QL63 1104 aa16.23■□□□□ 0.19
PAX3-202ENST00000336840 ALDH1L2Q3SY69 923 aa16.23■□□□□ 0.19
PAX3-202ENST00000336840 DOT1LQ8TEK3 1739 aa16.23■□□□□ 0.19
PAX3-202ENST00000336840 EXOC5O00471 708 aa16.23■□□□□ 0.19
PAX3-202ENST00000336840 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.23■□□□□ 0.19
PAX3-202ENST00000336840 DDX54Q8TDD1 881 aaKnown RBP16.23■□□□□ 0.19
PAX3-202ENST00000336840 SOS1Q07889 1333 aaPredicted RBP16.23■□□□□ 0.19
PAX3-202ENST00000336840 ERVV-2B6SEH9 535 aa16.22■□□□□ 0.19
PAX3-202ENST00000336840 FKBP8Q14318 412 aa16.22■□□□□ 0.19
PAX3-202ENST00000336840 KRT24Q2M2I5 525 aa16.21■□□□□ 0.19
PAX3-202ENST00000336840 SSH1Q8WYL5 1049 aa16.21■□□□□ 0.19
PAX3-202ENST00000336840 BRPF1P55201 1214 aaPredicted RBP16.21■□□□□ 0.18
PAX3-202ENST00000336840 DDB1Q16531 1140 aa16.21■□□□□ 0.18
PAX3-202ENST00000336840 ELL2O00472 640 aaPredicted RBP16.2■□□□□ 0.18
PAX3-202ENST00000336840 EIF4A1P60842 406 aaKnown RBP16.2■□□□□ 0.18
PAX3-202ENST00000336840 SMC4Q9NTJ3 1288 aa16.2■□□□□ 0.18
PAX3-202ENST00000336840 HEG1Q9ULI3 1381 aa16.2■□□□□ 0.18
PAX3-202ENST00000336840 C5P01031 1676 aa16.19■□□□□ 0.18
PAX3-202ENST00000336840 PLIN1O60240 522 aa16.19■□□□□ 0.18
PAX3-202ENST00000336840 CABP4P57796 275 aa16.19■□□□□ 0.18
PAX3-202ENST00000336840 IRX6P78412 446 aaPredicted RBP16.19■□□□□ 0.18
PAX3-202ENST00000336840 NFATC2IPQ8NCF5 419 aa16.19■□□□□ 0.18
PAX3-202ENST00000336840 BCL2L13Q9BXK5 485 aa16.19■□□□□ 0.18
PAX3-202ENST00000336840 KAT6BQ8WYB5 2073 aa16.19■□□□□ 0.18
PAX3-202ENST00000336840 ERICH6BQ5W0A0 696 aa16.19■□□□□ 0.18
PAX3-202ENST00000336840 TRPC5Q9UL62 973 aaPredicted RBP16.19■□□□□ 0.18
PAX3-202ENST00000336840 LAMB4A4D0S4 1761 aa16.19■□□□□ 0.18
PAX3-202ENST00000336840 FAM98CQ17RN3 349 aaKnown RBP16.18■□□□□ 0.18
PAX3-202ENST00000336840 KIF16BQ96L93 1317 aa16.18■□□□□ 0.18
PAX3-202ENST00000336840 KCNQ3O43525 872 aa16.18■□□□□ 0.18
PAX3-202ENST00000336840 HOXB7P09629 217 aa16.18■□□□□ 0.18
PAX3-202ENST00000336840 GJD4Q96KN9 370 aaPredicted RBP16.18■□□□□ 0.18
PAX3-202ENST00000336840 ZNF790Q6PG37 636 aa16.17■□□□□ 0.18
PAX3-202ENST00000336840 MRPL50Q8N5N7 158 aaKnown RBP16.16■□□□□ 0.18
PAX3-202ENST00000336840 KCPQ6ZWJ8 1503 aa16.16■□□□□ 0.18
PAX3-202ENST00000336840 CANXP27824 592 aaKnown RBP16.14■□□□□ 0.17
PAX3-202ENST00000336840 PDE3AQ14432 1141 aa16.14■□□□□ 0.17
PAX3-202ENST00000336840 MARCH10Q8NA82 808 aaPredicted RBP16.14■□□□□ 0.17
PAX3-202ENST00000336840 FRAT1Q92837 279 aaPredicted RBP16.14■□□□□ 0.17
PAX3-202ENST00000336840 BCL9O00512 1426 aa16.14■□□□□ 0.17
PAX3-202ENST00000336840 ONECUT3O60422 494 aaPredicted RBP16.14■□□□□ 0.17
PAX3-202ENST00000336840 SLC39A6Q13433 755 aa16.14■□□□□ 0.17
PAX3-202ENST00000336840 C20orf194Q5TEA3 1177 aa16.14■□□□□ 0.17
PAX3-202ENST00000336840 ZKSCAN2Q63HK3 967 aa16.14■□□□□ 0.17
PAX3-202ENST00000336840 TTC5Q8N0Z6 440 aa16.13■□□□□ 0.17
PAX3-202ENST00000336840 TMOD3Q9NYL9 352 aa16.13■□□□□ 0.17
PAX3-202ENST00000336840 GIGYF1O75420 1035 aaPredicted RBP16.12■□□□□ 0.17
PAX3-202ENST00000336840 CHMP4AQ9BY43 222 aa16.12■□□□□ 0.17
PAX3-202ENST00000336840 BRWD3Q6RI45 1802 aa16.12■□□□□ 0.17
PAX3-202ENST00000336840 CCDC30Q5VVM6 783 aa16.12■□□□□ 0.17
PAX3-202ENST00000336840 QTRT2Q9H974 415 aaKnown RBP16.12■□□□□ 0.17
PAX3-202ENST00000336840 NOB1Q9ULX3 412 aaKnown RBP16.12■□□□□ 0.17
PAX3-202ENST00000336840 SBF2Q86WG5 1849 aa16.12■□□□□ 0.17
PAX3-202ENST00000336840 TCERG1O14776 1098 aaKnown RBP16.11■□□□□ 0.17
PAX3-202ENST00000336840 IPO8O15397 1037 aaKnown RBP16.11■□□□□ 0.17
PAX3-202ENST00000336840 ATF7IPQ6VMQ6 1270 aa16.11■□□□□ 0.17
PAX3-202ENST00000336840 ARHGAP45Q92619 1136 aa16.11■□□□□ 0.17
PAX3-202ENST00000336840 N4BP2Q86UW6 1770 aaPredicted RBP16.11■□□□□ 0.17
PAX3-202ENST00000336840 NHSQ6T4R5 1651 aa16.11■□□□□ 0.17
PAX3-202ENST00000336840 MS4A1P11836 297 aa16.11■□□□□ 0.17
PAX3-202ENST00000336840 TRIM27P14373 513 aa16.11■□□□□ 0.17
PAX3-202ENST00000336840 HDGFL1Q5TGJ6 251 aa16.11■□□□□ 0.17
PAX3-202ENST00000336840 ZNF772Q68DY9 489 aaPredicted RBP16.11■□□□□ 0.17
PAX3-202ENST00000336840 ILDR1Q86SU0 546 aaPredicted RBP16.11■□□□□ 0.17
PAX3-202ENST00000336840 ZNF496Q96IT1 587 aaPredicted RBP16.11■□□□□ 0.17
PAX3-202ENST00000336840 FMNL2Q96PY5 1086 aa16.11■□□□□ 0.17
PAX3-202ENST00000336840 PIGBQ92521 554 aa16.1■□□□□ 0.17
PAX3-202ENST00000336840 CRBNQ96SW2 442 aa16.1■□□□□ 0.17
PAX3-202ENST00000336840 STK31Q9BXU1 1019 aa16.09■□□□□ 0.17
PAX3-202ENST00000336840 TNNQ9UQP3 1299 aa16.09■□□□□ 0.17
PAX3-202ENST00000336840 A0A0G2JS52 829 aa16.09■□□□□ 0.17
PAX3-202ENST00000336840 MYT1Q01538 1121 aa16.09■□□□□ 0.17
PAX3-202ENST00000336840 EXOC6Q8TAG9 804 aa16.09■□□□□ 0.17
PAX3-202ENST00000336840 PTPRCP08575 1304 aa16.09■□□□□ 0.17
PAX3-202ENST00000336840 CICQ96RK0 1608 aaPredicted RBP16.09■□□□□ 0.17
PAX3-202ENST00000336840 SLC4A2P04920 1241 aa16.08■□□□□ 0.16
PAX3-202ENST00000336840 DZIP1LQ8IYY4 767 aaKnown RBP16.08■□□□□ 0.16
PAX3-202ENST00000336840 PANK1Q8TE04 598 aa16.08■□□□□ 0.16
PAX3-202ENST00000336840 RGS12O14924 1447 aa16.08■□□□□ 0.16
PAX3-202ENST00000336840 SNRPA1P09661 255 aaKnown RBP16.07■□□□□ 0.16
PAX3-202ENST00000336840 RLBP1P12271 317 aa16.07■□□□□ 0.16
PAX3-202ENST00000336840 PRAMEF22A3QJZ6 481 aa16.07■□□□□ 0.16
PAX3-202ENST00000336840 PRIM1P49642 420 aaKnown RBP16.07■□□□□ 0.16
PAX3-202ENST00000336840 FTSJ3Q8IY81 847 aaKnown RBP16.07■□□□□ 0.16
PAX3-202ENST00000336840 ATG3Q9NT62 314 aa16.07■□□□□ 0.16
PAX3-202ENST00000336840 TJP1Q07157 1748 aa16.06■□□□□ 0.16
PAX3-202ENST00000336840 BTAF1O14981 1849 aa16.06■□□□□ 0.16
PAX3-202ENST00000336840 EIF2S2P20042 333 aaKnown RBP16.06■□□□□ 0.16
PAX3-202ENST00000336840 SEPT12Q8IYM1 358 aa16.06■□□□□ 0.16
PAX3-202ENST00000336840 NECTIN2Q92692 538 aa16.06■□□□□ 0.16
PAX3-202ENST00000336840 API5Q9BZZ5 524 aaKnown RBP16.06■□□□□ 0.16
PAX3-202ENST00000336840 ABCC4O15439 1325 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms