RNA–Protein interactions for RNA: ENST00000336520.7

MRPL55-203, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 2 BASIC

Gene MRPL55, Length 744 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-203ENST00000336520 RBM42Q9BTD8 480 aaKnown RBP15.21■□□□□ 0.03
MRPL55-203ENST00000336520 NFATC2IPQ8NCF5 419 aa15.2■□□□□ 0.02
MRPL55-203ENST00000336520 SCN11AQ9UI33 1791 aa15.2■□□□□ 0.02
MRPL55-203ENST00000336520 U2AF1L5P0DN76 240 aaPredicted RBP15.19■□□□□ 0.02
MRPL55-203ENST00000336520 POLD1P28340 1107 aa15.19■□□□□ 0.02
MRPL55-203ENST00000336520 ZEB1P37275 1124 aaPredicted RBP15.19■□□□□ 0.02
MRPL55-203ENST00000336520 U2AF1Q01081 240 aaKnown RBP eCLIP15.19■□□□□ 0.02
MRPL55-203ENST00000336520 DDX10Q13206 875 aaKnown RBP15.19■□□□□ 0.02
MRPL55-203ENST00000336520 ITPK1Q13572 414 aa15.19■□□□□ 0.02
MRPL55-203ENST00000336520 COL23A1Q86Y22 540 aaPredicted RBP15.19■□□□□ 0.02
MRPL55-203ENST00000336520 LINC00116Q8NCU8 138 aa15.19■□□□□ 0.02
MRPL55-203ENST00000336520 FLAD1Q8NFF5 587 aa15.19■□□□□ 0.02
MRPL55-203ENST00000336520 RNMTO43148 476 aaKnown RBP15.18■□□□□ 0.02
MRPL55-203ENST00000336520 PHF14O94880 888 aa15.18■□□□□ 0.02
MRPL55-203ENST00000336520 PRKAR2BP31323 418 aa15.18■□□□□ 0.02
MRPL55-203ENST00000336520 GAS2L2Q8NHY3 880 aa15.18■□□□□ 0.02
MRPL55-203ENST00000336520 ARXQ96QS3 562 aa15.18■□□□□ 0.02
MRPL55-203ENST00000336520 SGIP1Q9BQI5 828 aa15.18■□□□□ 0.02
MRPL55-203ENST00000336520 LGR6Q9HBX8 967 aa15.18■□□□□ 0.02
MRPL55-203ENST00000336520 MAP3K5Q99683 1374 aa15.17■□□□□ 0.02
MRPL55-203ENST00000336520 GNPATO15228 680 aa15.17■□□□□ 0.02
MRPL55-203ENST00000336520 PTCD1O75127 700 aaKnown RBP15.17■□□□□ 0.02
MRPL55-203ENST00000336520 RSPH6AQ9H0K4 717 aa15.17■□□□□ 0.02
MRPL55-203ENST00000336520 SLC52A2Q9HAB3 445 aa15.17■□□□□ 0.02
MRPL55-203ENST00000336520 MSL1Q68DK7 614 aa15.16■□□□□ 0.02
MRPL55-203ENST00000336520 FHDC1Q9C0D6 1143 aaPredicted RBP15.16■□□□□ 0.02
MRPL55-203ENST00000336520 MRC1P22897 1456 aa15.15■□□□□ 0.02
MRPL55-203ENST00000336520 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.15■□□□□ 0.02
MRPL55-203ENST00000336520 DCAF8L1A6NGE4 600 aa15.15■□□□□ 0.02
MRPL55-203ENST00000336520 GNAT3A8MTJ3 354 aa15.15■□□□□ 0.02
MRPL55-203ENST00000336520 SSFA2P28290 1259 aa15.15■□□□□ 0.02
MRPL55-203ENST00000336520 KLHL34Q8N239 644 aa15.15■□□□□ 0.02
MRPL55-203ENST00000336520 SLC4A9Q96Q91 983 aa15.15■□□□□ 0.02
MRPL55-203ENST00000336520 UBR3Q6ZT12 1888 aa15.14■□□□□ 0.01
MRPL55-203ENST00000336520 ZNF831Q5JPB2 1677 aa15.14■□□□□ 0.01
MRPL55-203ENST00000336520 RALBP1Q15311 655 aa15.14■□□□□ 0.01
MRPL55-203ENST00000336520 SMIM5Q71RC9 77 aa15.14■□□□□ 0.01
MRPL55-203ENST00000336520 AMIGO3Q86WK7 504 aa15.14■□□□□ 0.01
MRPL55-203ENST00000336520 PHACTR3Q96KR7 559 aa15.14■□□□□ 0.01
MRPL55-203ENST00000336520 VIRMAQ69YN4 1812 aaKnown RBP15.13■□□□□ 0.01
MRPL55-203ENST00000336520 FCHSD2O94868 740 aa15.13■□□□□ 0.01
MRPL55-203ENST00000336520 TEFQ10587 303 aa15.13■□□□□ 0.01
MRPL55-203ENST00000336520 SYT17Q9BSW7 474 aa15.13■□□□□ 0.01
MRPL55-203ENST00000336520 RTCBQ9Y3I0 505 aaKnown RBP15.13■□□□□ 0.01
MRPL55-203ENST00000336520 ADAMTS7Q9UKP4 1686 aa15.12■□□□□ 0.01
MRPL55-203ENST00000336520 NEFMP07197 916 aa15.12■□□□□ 0.01
MRPL55-203ENST00000336520 SLC39A6Q13433 755 aa15.12■□□□□ 0.01
MRPL55-203ENST00000336520 CNTNAP4Q9C0A0 1308 aa15.12■□□□□ 0.01
MRPL55-203ENST00000336520 COL24A1Q17RW2 1714 aa15.12■□□□□ 0.01
MRPL55-203ENST00000336520 RC3H1Q5TC82 1133 aaKnown RBP15.11■□□□□ 0.01
MRPL55-203ENST00000336520 COL5A3P25940 1745 aaPredicted RBP15.11■□□□□ 0.01
MRPL55-203ENST00000336520 CRKLP46109 303 aaKnown RBP15.1■□□□□ 0.01
MRPL55-203ENST00000336520 TRAPPC3LQ5T215 181 aa15.1■□□□□ 0.01
MRPL55-203ENST00000336520 TTC5Q8N0Z6 440 aa15.1■□□□□ 0.01
MRPL55-203ENST00000336520 IL17REQ8NFR9 667 aa15.1■□□□□ 0.01
MRPL55-203ENST00000336520 RTF1Q92541 710 aaKnown RBP15.09■□□□□ 0.01
MRPL55-203ENST00000336520 TJP1Q07157 1748 aa15.09■□□□□ 0.01
MRPL55-203ENST00000336520 RPS6KA4O75676 772 aa15.08■□□□□ 0
MRPL55-203ENST00000336520 ADRA2BP18089 450 aa15.08■□□□□ 0
MRPL55-203ENST00000336520 DNAJC10Q8IXB1 793 aa15.08■□□□□ 0
MRPL55-203ENST00000336520 MYBBP1AQ9BQG0 1328 aaKnown RBP15.08■□□□□ 0
MRPL55-203ENST00000336520 KCPQ6ZWJ8 1503 aa15.07■□□□□ 0
MRPL55-203ENST00000336520 CICQ96RK0 1608 aaPredicted RBP15.07■□□□□ 0
MRPL55-203ENST00000336520 RFC4P35249 363 aa15.07■□□□□ 0
MRPL55-203ENST00000336520 CEMIPQ8WUJ3 1361 aa15.07■□□□□ 0
MRPL55-203ENST00000336520 MYH14Q7Z406 1995 aaKnown RBP15.06■□□□□ 0
MRPL55-203ENST00000336520 ARHGEF1Q92888 912 aaKnown RBP15.06■□□□□ 0
MRPL55-203ENST00000336520 PNNQ9H307 717 aaKnown RBP15.06■□□□□ 0
MRPL55-203ENST00000336520 CCDC87Q9NVE4 849 aa15.06■□□□□ 0
MRPL55-203ENST00000336520 MAPK8IP3Q9UPT6 1336 aa15.06■□□□□ 0
MRPL55-203ENST00000336520 BTBD11A6QL63 1104 aa15.05■□□□□ -0
MRPL55-203ENST00000336520 ZNF790Q6PG37 636 aa15.05■□□□□ -0
MRPL55-203ENST00000336520 MCM10Q7L590 875 aa15.05■□□□□ -0
MRPL55-203ENST00000336520 VSIG10Q8N0Z9 540 aa15.05■□□□□ -0
MRPL55-203ENST00000336520 UBR2Q8IWV8 1755 aa15.05■□□□□ -0
MRPL55-203ENST00000336520 SIPA1L3O60292 1781 aaPredicted RBP15.04■□□□□ -0
MRPL55-203ENST00000336520 CYP19A1P11511 503 aaPredicted RBP15.04■□□□□ -0
MRPL55-203ENST00000336520 INTS5Q6P9B9 1019 aaKnown RBP15.04■□□□□ -0
MRPL55-203ENST00000336520 NLGN2Q8NFZ4 835 aa15.04■□□□□ -0
MRPL55-203ENST00000336520 ZNF496Q96IT1 587 aaPredicted RBP15.04■□□□□ -0
MRPL55-203ENST00000336520 HTATSF1O43719 755 aaKnown RBP15.03■□□□□ -0
MRPL55-203ENST00000336520 STARD3NLO95772 234 aa15.03■□□□□ -0
MRPL55-203ENST00000336520 MMP10P09238 476 aa15.03■□□□□ -0
MRPL55-203ENST00000336520 DCTN1Q14203 1278 aa15.03■□□□□ -0
MRPL55-203ENST00000336520 PELP1Q8IZL8 1130 aaKnown RBP15.03■□□□□ -0
MRPL55-203ENST00000336520 NLGN1Q8N2Q7 840 aa15.03■□□□□ -0
MRPL55-203ENST00000336520 FMNL2Q96PY5 1086 aa15.03■□□□□ -0
MRPL55-203ENST00000336520 HEG1Q9ULI3 1381 aa15.02■□□□□ -0
MRPL55-203ENST00000336520 NFE2L2Q16236 605 aa15.02■□□□□ -0
MRPL55-203ENST00000336520 GPR162Q16538 588 aa15.02■□□□□ -0
MRPL55-203ENST00000336520 PLEKHF1Q96S99 279 aa15.02■□□□□ -0
MRPL55-203ENST00000336520 CD2APQ9Y5K6 639 aa15.02■□□□□ -0
MRPL55-203ENST00000336520 C4AP0C0L4 1744 aa15.02□□□□□ -0.01
MRPL55-203ENST00000336520 SOS1Q07889 1333 aaPredicted RBP15.01□□□□□ -0.01
MRPL55-203ENST00000336520 GYS1P13807 737 aa15.01□□□□□ -0.01
MRPL55-203ENST00000336520 TEX13AQ9BXU3 409 aaPredicted RBP15.01□□□□□ -0.01
MRPL55-203ENST00000336520 PRKRIP1Q9H875 184 aaPredicted RBP15.01□□□□□ -0.01
MRPL55-203ENST00000336520 SRP68Q9UHB9 627 aaKnown RBP15.01□□□□□ -0.01
MRPL55-203ENST00000336520 ZBTB1Q9Y2K1 713 aa15.01□□□□□ -0.01
MRPL55-203ENST00000336520 USP42Q9H9J4 1324 aaKnown RBP15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 91.6 ms