RNA–Protein interactions for RNA: ENST00000335535.3

LCE4A-201, Transcript of late cornified envelope 4A, humanhuman

APPRIS P1 BASIC

Gene LCE4A, Length 388 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCE4A-201ENST00000335535 PER1O15534 1290 aaPredicted RBP16.5■□□□□ 0.23
LCE4A-201ENST00000335535 MAP3K19Q56UN5 1328 aa16.49■□□□□ 0.23
LCE4A-201ENST00000335535 PCDH11XQ9BZA7 1347 aa16.49■□□□□ 0.23
LCE4A-201ENST00000335535 PCDH11YQ9BZA8 1340 aa16.49■□□□□ 0.23
LCE4A-201ENST00000335535 RRAGCQ9HB90 399 aa16.49■□□□□ 0.23
LCE4A-201ENST00000335535 ITGB4P16144 1822 aa16.49■□□□□ 0.23
LCE4A-201ENST00000335535 RTL1A6NKG5 1358 aa16.49■□□□□ 0.23
LCE4A-201ENST00000335535 FCHSD2O94868 740 aa16.48■□□□□ 0.23
LCE4A-201ENST00000335535 MPRIPQ6WCQ1 1025 aa16.48■□□□□ 0.23
LCE4A-201ENST00000335535 LINC00116Q8NCU8 138 aa16.48■□□□□ 0.23
LCE4A-201ENST00000335535 ZC3H4Q9UPT8 1303 aaKnown RBP16.47■□□□□ 0.23
LCE4A-201ENST00000335535 DPEP1P16444 411 aa16.47■□□□□ 0.23
LCE4A-201ENST00000335535 KCNA3P22001 575 aa16.47■□□□□ 0.23
LCE4A-201ENST00000335535 NBPF6Q5VWK0 638 aa16.47■□□□□ 0.23
LCE4A-201ENST00000335535 HDGFL2Q7Z4V5 671 aaPredicted RBP16.47■□□□□ 0.23
LCE4A-201ENST00000335535 DCAF5Q96JK2 942 aa16.47■□□□□ 0.23
LCE4A-201ENST00000335535 NBPF4Q96M43 638 aa16.47■□□□□ 0.23
LCE4A-201ENST00000335535 C4AP0C0L4 1744 aa16.47■□□□□ 0.23
LCE4A-201ENST00000335535 DIEXFQ68CQ4 756 aaKnown RBP16.46■□□□□ 0.23
LCE4A-201ENST00000335535 SLC12A5Q9H2X9 1139 aa16.46■□□□□ 0.23
LCE4A-201ENST00000335535 LOC102724428A0A0B4J2F2 783 aa16.45■□□□□ 0.22
LCE4A-201ENST00000335535 SIK1P57059 783 aa16.45■□□□□ 0.22
LCE4A-201ENST00000335535 RAPGEF4Q8WZA2 1011 aa16.45■□□□□ 0.22
LCE4A-201ENST00000335535 RNF181Q9P0P0 153 aa16.45■□□□□ 0.22
LCE4A-201ENST00000335535 A0A1W2PP64 1363 aa16.45■□□□□ 0.22
LCE4A-201ENST00000335535 GNPATO15228 680 aa16.44■□□□□ 0.22
LCE4A-201ENST00000335535 CYP27B1O15528 508 aa16.44■□□□□ 0.22
LCE4A-201ENST00000335535 NLGN1Q8N2Q7 840 aa16.44■□□□□ 0.22
LCE4A-201ENST00000335535 PIGBQ92521 554 aa16.44■□□□□ 0.22
LCE4A-201ENST00000335535 PANK3Q9H999 370 aa16.44■□□□□ 0.22
LCE4A-201ENST00000335535 CCDC87Q9NVE4 849 aa16.44■□□□□ 0.22
LCE4A-201ENST00000335535 KDM6AO15550 1401 aaPredicted RBP16.44■□□□□ 0.22
LCE4A-201ENST00000335535 SBF1O95248 1867 aa16.44■□□□□ 0.22
LCE4A-201ENST00000335535 TATP17735 454 aaPredicted RBP16.43■□□□□ 0.22
LCE4A-201ENST00000335535 AMPHP49418 695 aa16.43■□□□□ 0.22
LCE4A-201ENST00000335535 PRDM10Q9NQV6 1147 aa16.43■□□□□ 0.22
LCE4A-201ENST00000335535 ITPK1Q13572 414 aa16.42■□□□□ 0.22
LCE4A-201ENST00000335535 NKX1-1Q15270 411 aaPredicted RBP16.42■□□□□ 0.22
LCE4A-201ENST00000335535 CARD14Q9BXL6 1004 aa16.42■□□□□ 0.22
LCE4A-201ENST00000335535 TERF2IPQ9NYB0 399 aa16.42■□□□□ 0.22
LCE4A-201ENST00000335535 NPC1L1Q9UHC9 1359 aa16.41■□□□□ 0.22
LCE4A-201ENST00000335535 PIM2Q9P1W9 311 aa16.41■□□□□ 0.22
LCE4A-201ENST00000335535 ZNF831Q5JPB2 1677 aa16.4■□□□□ 0.22
LCE4A-201ENST00000335535 SMG6Q86US8 1419 aaKnown RBP16.4■□□□□ 0.22
LCE4A-201ENST00000335535 VEGFAP15692 232 aaPredicted RBP16.4■□□□□ 0.22
LCE4A-201ENST00000335535 USHBP1Q8N6Y0 703 aa16.4■□□□□ 0.22
LCE4A-201ENST00000335535 POLR3GLQ9BT43 218 aa16.4■□□□□ 0.22
LCE4A-201ENST00000335535 ADRA2BP18089 450 aa16.39■□□□□ 0.21
LCE4A-201ENST00000335535 DALRD3Q5D0E6 543 aaKnown RBP16.39■□□□□ 0.21
LCE4A-201ENST00000335535 TMC1Q8TDI8 760 aa16.39■□□□□ 0.21
LCE4A-201ENST00000335535 COG3Q96JB2 828 aa16.39■□□□□ 0.21
LCE4A-201ENST00000335535 GYS1P13807 737 aa16.38■□□□□ 0.21
LCE4A-201ENST00000335535 AMER1Q5JTC6 1135 aaPredicted RBP16.38■□□□□ 0.21
LCE4A-201ENST00000335535 KDRP35968 1356 aa16.38■□□□□ 0.21
LCE4A-201ENST00000335535 NCAPD2Q15021 1401 aa16.37■□□□□ 0.21
LCE4A-201ENST00000335535 GLTPD2A6NH11 291 aa16.37■□□□□ 0.21
LCE4A-201ENST00000335535 FOXN1O15353 648 aa16.37■□□□□ 0.21
LCE4A-201ENST00000335535 TRAPPC3LQ5T215 181 aa16.37■□□□□ 0.21
LCE4A-201ENST00000335535 PARP3Q9Y6F1 533 aa16.37■□□□□ 0.21
LCE4A-201ENST00000335535 FBLN1P23142 703 aa16.36■□□□□ 0.21
LCE4A-201ENST00000335535 ATP6V1AP38606 617 aa16.36■□□□□ 0.21
LCE4A-201ENST00000335535 CREBZFQ9NS37 354 aa16.36■□□□□ 0.21
LCE4A-201ENST00000335535 RTCBQ9Y3I0 505 aaKnown RBP16.36■□□□□ 0.21
LCE4A-201ENST00000335535 INSRP06213 1382 aa16.36■□□□□ 0.21
LCE4A-201ENST00000335535 FAM161AQ3B820 660 aa16.35■□□□□ 0.21
LCE4A-201ENST00000335535 ASAP1Q9ULH1 1129 aa16.35■□□□□ 0.21
LCE4A-201ENST00000335535 COL5A3P25940 1745 aaPredicted RBP16.34■□□□□ 0.21
LCE4A-201ENST00000335535 RC3H1Q5TC82 1133 aaKnown RBP16.34■□□□□ 0.21
LCE4A-201ENST00000335535 ARHGEF1Q92888 912 aaKnown RBP16.34■□□□□ 0.21
LCE4A-201ENST00000335535 KIF24Q5T7B8 1368 aa16.34■□□□□ 0.21
LCE4A-201ENST00000335535 CTCFP49711 727 aaPredicted RBP16.33■□□□□ 0.2
LCE4A-201ENST00000335535 TMOD3Q9NYL9 352 aa16.33■□□□□ 0.2
LCE4A-201ENST00000335535 POTECB2RU33 542 aa16.32■□□□□ 0.2
LCE4A-201ENST00000335535 CNTNAP1P78357 1384 aa16.32■□□□□ 0.2
LCE4A-201ENST00000335535 RRS1Q15050 365 aaKnown RBP16.32■□□□□ 0.2
LCE4A-201ENST00000335535 TIAM2Q8IVF5 1701 aa16.32■□□□□ 0.2
LCE4A-201ENST00000335535 CNTNAP4Q9C0A0 1308 aa16.32■□□□□ 0.2
LCE4A-201ENST00000335535 PRKRIP1Q9H875 184 aaPredicted RBP16.32■□□□□ 0.2
LCE4A-201ENST00000335535 KNSTRNQ9Y448 316 aa16.32■□□□□ 0.2
LCE4A-201ENST00000335535 LMNB1P20700 586 aa16.31■□□□□ 0.2
LCE4A-201ENST00000335535 ATG3Q9NT62 314 aa16.31■□□□□ 0.2
LCE4A-201ENST00000335535 FLT4P35916 1363 aa16.3■□□□□ 0.2
LCE4A-201ENST00000335535 RPS6KA4O75676 772 aa16.3■□□□□ 0.2
LCE4A-201ENST00000335535 RFC4P35249 363 aa16.3■□□□□ 0.2
LCE4A-201ENST00000335535 RGS19P49795 217 aa16.3■□□□□ 0.2
LCE4A-201ENST00000335535 ABHD8Q96I13 439 aa16.3■□□□□ 0.2
LCE4A-201ENST00000335535 MKRN1Q9UHC7 482 aaKnown RBP16.3■□□□□ 0.2
LCE4A-201ENST00000335535 RASSF7Q02833 373 aa16.29■□□□□ 0.2
LCE4A-201ENST00000335535 HSP90AB2PQ58FF8 381 aa16.29■□□□□ 0.2
LCE4A-201ENST00000335535 MIER1Q8N108 512 aa16.29■□□□□ 0.2
LCE4A-201ENST00000335535 SLC4A9Q96Q91 983 aa16.29■□□□□ 0.2
LCE4A-201ENST00000335535 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.29■□□□□ 0.2
LCE4A-201ENST00000335535 FYB1O15117 783 aa16.28■□□□□ 0.2
LCE4A-201ENST00000335535 CHRNA5P30532 468 aa16.28■□□□□ 0.2
LCE4A-201ENST00000335535 DDR1Q08345 913 aa16.28■□□□□ 0.2
LCE4A-201ENST00000335535 RALBP1Q15311 655 aa16.28■□□□□ 0.2
LCE4A-201ENST00000335535 SPG7Q9UQ90 795 aa16.28■□□□□ 0.2
LCE4A-201ENST00000335535 ANP32CO43423 234 aa16.27■□□□□ 0.2
LCE4A-201ENST00000335535 AIDAQ96BJ3 306 aa16.27■□□□□ 0.2
LCE4A-201ENST00000335535 DLEC1Q9Y238 1755 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms